Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_O24
         (502 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like p...    44   6e-05
AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like...    42   2e-04
U97408-1|AAB93344.2|  360|Caenorhabditis elegans Trypsin-like pr...    41   6e-04
AF003134-1|AAB54144.1|  522|Caenorhabditis elegans Trypsin-like ...    37   0.007
U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like p...    35   0.038
AF022971-2|AAG23980.1|  327|Caenorhabditis elegans Seven tm rece...    32   0.20 
Z92832-5|CAB07374.2|  292|Caenorhabditis elegans Hypothetical pr...    32   0.27 
U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like pr...    31   0.62 
Z78013-9|CAB01420.2|  297|Caenorhabditis elegans Hypothetical pr...    30   1.1  
L14745-8|AAA27923.1|  244|Caenorhabditis elegans Tetraspanin fam...    28   3.3  
Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical pr...    28   4.4  
Z83108-2|CAB05510.1|  820|Caenorhabditis elegans Hypothetical pr...    27   5.8  
Z83228-9|CAB05737.2|  539|Caenorhabditis elegans Hypothetical pr...    27   7.6  
Z54235-2|CAA90972.2|  371|Caenorhabditis elegans Hypothetical pr...    27   7.6  
U67079-1|AAB40716.1|  539|Caenorhabditis elegans C2-HC type zinc...    27   7.6  

>U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like
           protease protein 1 protein.
          Length = 293

 Score = 44.0 bits (99), Expect = 6e-05
 Identities = 20/51 (39%), Positives = 31/51 (60%)
 Frame = +3

Query: 321 TVVNKIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHC 473
           T+ ++++GG+++    +PW V +      H    CGGSLI   +VLTAAHC
Sbjct: 53  TLDHRLIGGSESSPHSWPWTVQLLSRLGHHR---CGGSLIDPNFVLTAAHC 100


>AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like
           protease protein 5 protein.
          Length = 331

 Score = 42.3 bits (95), Expect = 2e-04
 Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
 Frame = +3

Query: 285 LESNN---ECCGVEDTVVNKIV---GGNDTKITQY-PWLVVIEYESFD-HMKLLCGGSLI 440
           + SNN   E CG + T  + ++    GN    T   PW V I  ++     +++CGG+LI
Sbjct: 8   INSNNLDDELCGRQSTYTSFMLTDAAGNTGNPTHLAPWAVQIRVKARKGDFEVICGGTLI 67

Query: 441 SSKYVLTAAHC 473
           + K+VLTAAHC
Sbjct: 68  TLKHVLTAAHC 78


>U97408-1|AAB93344.2|  360|Caenorhabditis elegans Trypsin-like
           protease protein 6 protein.
          Length = 360

 Score = 40.7 bits (91), Expect = 6e-04
 Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
 Frame = +3

Query: 261 SRAVTAFPLESNNECCGVEDTVVNKIVGGNDTKITQYPWLVVIE-YESFDHMKLL----C 425
           SR +TA   E   E CG    V +KI  G   +I + PW V I  Y +  ++       C
Sbjct: 18  SRKLTAEENEKRLEDCG--KNVKSKIFNGRKAEIDEAPWAVRINTYTNVKNIDETWSKHC 75

Query: 426 GGSLISSKYVLTAAHC 473
            G+L S +++LTA HC
Sbjct: 76  SGTLTSPRHILTATHC 91


>AF003134-1|AAB54144.1|  522|Caenorhabditis elegans Trypsin-like
           protease protein 7 protein.
          Length = 522

 Score = 37.1 bits (82), Expect = 0.007
 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = +3

Query: 333 KIVGGNDTKITQYPWLVVIEYESFDHMKLL-CGGSLISSKYVLTAAHCVTG 482
           K+  G D   ++ PW V     S D      C G+++S +++L A HC  G
Sbjct: 162 KVYNGRDASQSEAPWSVFTYLYSKDEQSATTCTGTIVSPRHILIATHCFAG 212


>U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like
           protease protein 2 protein.
          Length = 265

 Score = 34.7 bits (76), Expect = 0.038
 Identities = 14/49 (28%), Positives = 27/49 (55%)
 Frame = +3

Query: 327 VNKIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHC 473
           + ++VGG +T    +PW   +  ++       CG S++   +++TAAHC
Sbjct: 24  IARVVGGFETVPGAFPWTAALRNKATKAHH--CGASILDKTHLITAAHC 70


>AF022971-2|AAG23980.1|  327|Caenorhabditis elegans Seven tm
           receptor protein 46 protein.
          Length = 327

 Score = 32.3 bits (70), Expect = 0.20
 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
 Frame = +3

Query: 315 EDTVVNKIVGGNDTKITQYPWLVVIEYESFDHMK------LLCGGSLISSKYVL 458
           +D + N  +   D  ITQ    V+I Y S D ++      ++CGGSL++ +YV+
Sbjct: 159 DDYLRNTFLDSYDLDITQTARFVLIPYASDDSLRWRNLSFIICGGSLLTVQYVI 212


>Z92832-5|CAB07374.2|  292|Caenorhabditis elegans Hypothetical
           protein F31D4.6 protein.
          Length = 292

 Score = 31.9 bits (69), Expect = 0.27
 Identities = 14/40 (35%), Positives = 24/40 (60%)
 Frame = +3

Query: 351 DTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAH 470
           ++KI  +PW V    +  + +    GGS+IS  +++TAAH
Sbjct: 22  ESKIKNFPWAVSFTVDGVNRL----GGSIISPYHIITAAH 57


>U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like
           protease protein 3 protein.
          Length = 313

 Score = 30.7 bits (66), Expect = 0.62
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = +3

Query: 333 KIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHC 473
           +I+GGN        W+  +     +   +LCG ++I   +++TAAHC
Sbjct: 37  RIIGGNSID-DGANWMAKLVSYGDNGQGILCGATVIDDFWLVTAAHC 82


>Z78013-9|CAB01420.2|  297|Caenorhabditis elegans Hypothetical
           protein F15B9.5 protein.
          Length = 297

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = +3

Query: 420 LCGGSLISSKYVLTAAHCV 476
           +CGG LI+   V+T+AHCV
Sbjct: 45  VCGGVLIAPSIVITSAHCV 63


>L14745-8|AAA27923.1|  244|Caenorhabditis elegans Tetraspanin family
           protein 1 protein.
          Length = 244

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 18/70 (25%), Positives = 35/70 (50%)
 Frame = +3

Query: 285 LESNNECCGVEDTVVNKIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTA 464
           ++    CCG+E+++ N +  G    ++Q P   V  ++S D+  ++ G  L+    + T 
Sbjct: 152 IQDKYNCCGIENSLFNVMYCG---PMSQKPHCDVAVFDSVDNTMMISGIILLVILILQTI 208

Query: 465 AHCVTGAILI 494
           A  +   ILI
Sbjct: 209 AIILPVPILI 218


>Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical
           protein E01G6.1 protein.
          Length = 1391

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 19/65 (29%), Positives = 25/65 (38%), Gaps = 1/65 (1%)
 Frame = +3

Query: 9   GYENNIPMVCCPIS-NACKTPDDKPGICVGLYNCEHITYMMLDKTRKSKMDYVRQSVCNG 185
           GYE N    CCP S NAC     +   C G       +    DK++K    +V       
Sbjct: 449 GYECNDSSYCCPSSENACNANMSRGNGCKG---STQRSMWFYDKSKKKCSQFVYNGCGGT 505

Query: 186 PETFS 200
           P  F+
Sbjct: 506 PNRFT 510


>Z83108-2|CAB05510.1|  820|Caenorhabditis elegans Hypothetical
           protein F44E5.2 protein.
          Length = 820

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 16/59 (27%), Positives = 31/59 (52%)
 Frame = +3

Query: 246 LNERCSRAVTAFPLESNNECCGVEDTVVNKIVGGNDTKITQYPWLVVIEYESFDHMKLL 422
           +N+  S+   +FP   N     + DT +  + G ++ K  Q   ++ +E+ES+D +K L
Sbjct: 160 INDEFSQLCNSFP---NLHKLDISDTNIGNLSGISNLKNLQKLCMMNLEFESYDDIKEL 215


>Z83228-9|CAB05737.2|  539|Caenorhabditis elegans Hypothetical
           protein F52F12.6 protein.
          Length = 539

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = -1

Query: 436 SEPPHSSFI*SKLSYSITTSHGYXVIFVSFPPTILLTTVSSTP 308
           S PPHSS   S++   IT ++    + +S  PT+  T   S P
Sbjct: 205 SSPPHSSGSESRVMSPITHTNISDELSISTTPTVAFTPNGSIP 247


>Z54235-2|CAA90972.2|  371|Caenorhabditis elegans Hypothetical
           protein C09G9.2 protein.
          Length = 371

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +3

Query: 267 AVTAFPLESNNECCGVEDTVVNKIVGGN 350
           A+ + P +SN  CCG +D +V  I   N
Sbjct: 225 ALCSHPAQSNLVCCGTDDGIVGLIDARN 252


>U67079-1|AAB40716.1|  539|Caenorhabditis elegans C2-HC type zinc
           finger proteinC.e-MyT1 protein.
          Length = 539

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = -1

Query: 436 SEPPHSSFI*SKLSYSITTSHGYXVIFVSFPPTILLTTVSSTP 308
           S PPHSS   S++   IT ++    + +S  PT+  T   S P
Sbjct: 205 SSPPHSSGSESRVMSPITHTNISDELSISTTPTVAFTPNGSIP 247


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,052,462
Number of Sequences: 27780
Number of extensions: 253979
Number of successful extensions: 723
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 722
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 956602620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)