Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_O22
(570 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_31891| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 4e-05
SB_46526| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.50
SB_14886| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.50
SB_49461| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_9542| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_21723| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_21477| Best HMM Match : 7tm_1 (HMM E-Value=2.7e-06) 29 2.7
SB_29194| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_17728| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0032) 29 3.5
SB_8029| Best HMM Match : Mucin (HMM E-Value=8.6) 28 4.7
SB_13324| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_37609| Best HMM Match : Extensin_2 (HMM E-Value=0.081) 28 6.2
SB_10988| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_40536| Best HMM Match : Peptidase_A16_N (HMM E-Value=0.00014) 27 8.2
SB_48770| Best HMM Match : Peptidase_C1 (HMM E-Value=1.9e-14) 27 8.2
SB_25603| Best HMM Match : Ion_trans_2 (HMM E-Value=4.1e-35) 27 8.2
>SB_31891| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 282
Score = 45.2 bits (102), Expect = 4e-05
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Frame = +1
Query: 277 DLLRISEEMFNADINNAFNYIQVSL--QGKTSPMSKNDEASSNLLN-VPENVWSGPTIRP 447
+L + ++M+ AD N + ++ QGKT S++D+AS L V PT
Sbjct: 2 ELSHVCDQMWKADSNRLVPEVDYAIDPQGKTRFHSRSDQASDPLFTWVNPEALRKPTYDA 61
Query: 448 FVALFDNYHKNVIRPEFVTPKEETEQNNV 534
FV L DNY +PE V +EE +N V
Sbjct: 62 FVKLLDNYASETGKPEVVN-QEEINENRV 89
>SB_46526| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 152
Score = 31.5 bits (68), Expect = 0.50
Identities = 30/111 (27%), Positives = 44/111 (39%)
Frame = +1
Query: 235 DDMLRQVQDSTTDDDLLRISEEMFNADINNAFNYIQVSLQGKTSPMSKNDEASSNLLNVP 414
D R + S D L R E++ + N+ Y+ +L + S NDE SS V
Sbjct: 22 DRSFRCLVMSACDILLKRKDEDVLHGYGNSPSQYVVTTLSYNCA--SDNDELSSVDAAVL 79
Query: 415 ENVWSGPTIRPFVALFDNYHKNVIRPEFVTPKEETEQNNVHQHYTRHRTYS 567
+ ++G A N IRP + T K +N H H H +S
Sbjct: 80 KQSYAGIVTLALEAAKTNSDTPQIRPHYKTAKPGLSDSNDHDH-NNHAPFS 129
>SB_14886| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1028
Score = 31.5 bits (68), Expect = 0.50
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
Frame = +1
Query: 121 NLISNSVTGQQGNTAQNTLQQIGTVVGGVVDYAKKKSYDDMLRQVQD----STTDDDLLR 288
N + S+ GQ + + GG VD + DML QV D + ++DD +R
Sbjct: 610 NFLGISIVGQSNKKGDGGIYVGSVMKGGAVDLDGRVEPGDMLLQVNDVNFENMSNDDAVR 669
Query: 289 ISEEM 303
+ EM
Sbjct: 670 VLREM 674
>SB_49461| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 257
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 442 RPFVALFDNYHKNVIRPEFVTPKEETEQNNVHQHYTRHRTY 564
RPFV L + K + + T K+E + + +HY RH Y
Sbjct: 217 RPFVVLNKSRRKLPWQADKSTKKDEVPYSELKKHYHRHHWY 257
>SB_9542| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 29.1 bits (62), Expect = 2.7
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 8/60 (13%)
Frame = +1
Query: 373 SKNDEA--SSNLLN----VPENVW--SGPTIRPFVALFDNYHKNVIRPEFVTPKEETEQN 528
+K DE S N+ N V N W S T F+ L DNY ++ PEF T + T+Q+
Sbjct: 10 NKRDEPYISLNITNLTTTVTVNTWDLSVKTSLGFIQLIDNYFQDPKGPEFPTKLKNTQQS 69
>SB_21723| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1512
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 442 RPFVALFDNYHKNVIRPEFVTPKEETEQNNVHQHYTRHRTY 564
RPFV L + K + + T K+E + + +HY RH Y
Sbjct: 1470 RPFVVLNKSRRKLPWQADKSTKKDEVPYSELKKHYHRHHWY 1510
>SB_21477| Best HMM Match : 7tm_1 (HMM E-Value=2.7e-06)
Length = 348
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = -1
Query: 174 CILSRIPLLSSHRIRY*IWKDTVKYLTSRLS-YVIGMT 64
CILS I + S+ + IWKD +K S + YV+G++
Sbjct: 27 CILSAITITSNILLLVAIWKDPLKCFKSAATYYVVGLS 64
>SB_29194| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2916
Score = 28.7 bits (61), Expect = 3.5
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +1
Query: 163 AQNTLQQIGTVVGGVVDYAKKKSYDDMLRQVQ-DSTTDDDLLRISEE 300
A T++++ + V+YAKKKS + Q+ D TT D +RI+E+
Sbjct: 191 AHKTIEELRQQLDRTVEYAKKKSCELNTTQINLDKTTGD--MRITEK 235
>SB_17728| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0032)
Length = 1293
Score = 28.7 bits (61), Expect = 3.5
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +1
Query: 163 AQNTLQQIGTVVGGVVDYAKKKSYDDMLRQVQ-DSTTDDDLLRISEE 300
A T++++ + V+YAKKKS + Q+ D TT D +RI+E+
Sbjct: 139 AHKTIEELRQQLDRTVEYAKKKSCELNTTQINLDKTTGD--MRITEK 183
>SB_8029| Best HMM Match : Mucin (HMM E-Value=8.6)
Length = 325
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +2
Query: 158 IRLRIHCNKSVRLSVASLIMLKRKATMTC 244
+R+ I CN + ++AS I+LK K T++C
Sbjct: 90 VRVPIRCNGTNDKTLASCIVLKIKGTLSC 118
>SB_13324| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 446
Score = 27.9 bits (59), Expect = 6.2
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -2
Query: 419 FSGTFSKLDDASSFFDMG 366
F G S+LDDA ++FD+G
Sbjct: 323 FRGEMSELDDAGTYFDLG 340
>SB_37609| Best HMM Match : Extensin_2 (HMM E-Value=0.081)
Length = 1617
Score = 27.9 bits (59), Expect = 6.2
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +1
Query: 262 STTDDDLLRISEEMFNADINNAFNYIQVSLQGKTSPMSKND-EASSNLLNVPENVWSGPT 438
S + D +E++ N D N A N I S K SP + + E + ++ P+NV P
Sbjct: 964 SRSQSDDSSSNEQLPNLD-NTASNGIDASAFVKDSPENVSVIERDTLSVSPPKNVSMSPA 1022
Query: 439 IRPFVALFDNY 471
PF A D Y
Sbjct: 1023 PDPFTAQVDPY 1033
>SB_10988| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 366
Score = 27.9 bits (59), Expect = 6.2
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -2
Query: 419 FSGTFSKLDDASSFFDMG 366
F G S+LDDA ++FD+G
Sbjct: 187 FRGEMSELDDAGTYFDLG 204
>SB_40536| Best HMM Match : Peptidase_A16_N (HMM E-Value=0.00014)
Length = 672
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +3
Query: 399 LTKRARERVEWPYNKAVRSAI 461
L KR RE EWP NKA +
Sbjct: 584 LPKRTREESEWPENKAAEEDV 604
>SB_48770| Best HMM Match : Peptidase_C1 (HMM E-Value=1.9e-14)
Length = 183
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +1
Query: 442 RPFVALFDNYHKNVIRPEFVTPKEETEQNNVHQHYTRHRTY 564
RPFV L + + + T K+E + + +HY RH Y
Sbjct: 141 RPFVVLNKSRRNMPWQADKSTKKDEVPYSQLKKHYHRHHWY 181
>SB_25603| Best HMM Match : Ion_trans_2 (HMM E-Value=4.1e-35)
Length = 587
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/54 (25%), Positives = 24/54 (44%)
Frame = +1
Query: 163 AQNTLQQIGTVVGGVVDYAKKKSYDDMLRQVQDSTTDDDLLRISEEMFNADINN 324
+ N L + + +VD DD ++++ +D + ISE NA NN
Sbjct: 427 SMNNLMETFGLTARIVDLQDSGEDDDHGNELEELRNNDSCMNISENQDNASKNN 480
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.316 0.132 0.377
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,642,758
Number of Sequences: 59808
Number of extensions: 317880
Number of successful extensions: 1105
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1001
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1103
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1349364063
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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