Samia BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_O21
         (425 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC119.16c |||conserved fungal protein|Schizosaccharomyces pomb...    34   0.011
SPBC16A3.12c |||triglyceride lipase-cholesterol esterase |Schizo...    27   1.6  
SPBC14C8.15 |||triglyceride lipase-cholesterol esterase |Schizos...    25   3.7  
SPAC458.05 |pik3|vps34|phosphatidylinositol 3-kinase Pik3|Schizo...    25   4.9  
SPBC725.16 |res1|sct1|MBF transcription factor complex subunit R...    25   6.5  
SPAC140.04 |||conserved fungal protein|Schizosaccharomyces pombe...    25   6.5  
SPAC2C4.08 |||conserved fungal protein|Schizosaccharomyces pombe...    24   8.6  

>SPBC119.16c |||conserved fungal protein|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 448

 Score = 33.9 bits (74), Expect = 0.011
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = +2

Query: 155 SHSLSTDLKTTIIRHIGCFFNCIFRFALQRK 247
           S  LS    T ++ H+G  F C+++FALQRK
Sbjct: 171 SKELSQSYATILLDHLGPAFYCLYKFALQRK 201


>SPBC16A3.12c |||triglyceride lipase-cholesterol esterase
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 443

 Score = 26.6 bits (56), Expect = 1.6
 Identities = 16/58 (27%), Positives = 24/58 (41%)
 Frame = +2

Query: 38  HLFGRPVLLLACLLWQYPVLIAVICRCTSV*VKNQ*QWTSHSLSTDLKTTIIRHIGCF 211
           HLFGR  LL +   WQ      +  +   V +K    W   ++S + K     H+  F
Sbjct: 263 HLFGRRCLLPSVTFWQNICYPPIFVKIVDVSLKILFNWDLSNISLNQKLCGYAHLYSF 320


>SPBC14C8.15 |||triglyceride lipase-cholesterol esterase
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 460

 Score = 25.4 bits (53), Expect = 3.7
 Identities = 13/57 (22%), Positives = 25/57 (43%)
 Frame = +2

Query: 41  LFGRPVLLLACLLWQYPVLIAVICRCTSV*VKNQ*QWTSHSLSTDLKTTIIRHIGCF 211
           +FGR  +L + + WQ  +   V  +   + ++    WT  ++S   K     H+  F
Sbjct: 268 MFGRNSMLGSAVFWQAVLYPPVFAKIVDLFLRFFLSWTGKNISETQKIVAYSHLYSF 324


>SPAC458.05 |pik3|vps34|phosphatidylinositol 3-kinase
           Pik3|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 801

 Score = 25.0 bits (52), Expect = 4.9
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = +2

Query: 2   WGQISRFKN*HIHLFGRPVLLLACLLWQYPVL 97
           +G+I  F++ H+ L   P+L L  L + +PV+
Sbjct: 181 FGKIKDFRSKHMSLVTIPILYLDFLQFSFPVV 212


>SPBC725.16 |res1|sct1|MBF transcription factor complex subunit
           Res1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 637

 Score = 24.6 bits (51), Expect = 6.5
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -2

Query: 379 SFHEIQSQATSSVNFLSSLLDF 314
           S H+I++   SS N+  SLLD+
Sbjct: 186 SLHDIKASPFSSNNYAQSLLDY 207


>SPAC140.04 |||conserved fungal protein|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 295

 Score = 24.6 bits (51), Expect = 6.5
 Identities = 10/22 (45%), Positives = 17/22 (77%)
 Frame = -2

Query: 370 EIQSQATSSVNFLSSLLDFRKQ 305
           EIQ  A S++NFL+ L++ +K+
Sbjct: 8   EIQVSAKSNLNFLNELIEEKKR 29


>SPAC2C4.08 |||conserved fungal protein|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 243

 Score = 24.2 bits (50), Expect = 8.6
 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = -1

Query: 407 ISYTNLLKTKFPRNPEPGDEQRELSFF-TLGL*KANIPQNISFIKI 273
           I Y N+L    P++    D Q   SFF +L L + +   NIS  K+
Sbjct: 161 IKYANVLGIPIPKDVTVLDTQNVFSFFQSLFLKEISNSNNISLAKM 206


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,701,311
Number of Sequences: 5004
Number of extensions: 33248
Number of successful extensions: 80
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 80
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 152416050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)