Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_O21
         (425 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC111560-1|AAI11561.1| 1040|Homo sapiens protocadherin 10 protein.     32   0.70 
AY013874-1|AAK21987.1|  896|Homo sapiens protocadherin 10 protein.     32   0.70 
AK024636-1|BAB14940.1|  410|Homo sapiens protein ( Homo sapiens ...    32   0.70 
AC105383-1|AAY41018.1| 1040|Homo sapiens unknown protein.              32   0.70 
AB037821-1|BAA92638.1| 1093|Homo sapiens KIAA1400 protein protein.     32   0.70 
BC035194-1|AAH35194.2|  189|Homo sapiens DNAJC5G protein protein.      26   1.9  
AK097736-1|BAC05155.1|  189|Homo sapiens protein ( Homo sapiens ...    26   1.9  
AC013413-3|AAY24295.1|  189|Homo sapiens unknown protein.              26   1.9  
AF368277-1|AAK60572.1|  109|Homo sapiens gamma cysteine string p...    26   2.0  

>BC111560-1|AAI11561.1| 1040|Homo sapiens protocadherin 10 protein.
          Length = 1040

 Score = 32.3 bits (70), Expect = 0.70
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = +3

Query: 24  KTNIYICLAGRCCCWPVCCG 83
           K NIY CLA  CC    CCG
Sbjct: 745 KLNIYTCLASDCCLCCCCCG 764


>AY013874-1|AAK21987.1|  896|Homo sapiens protocadherin 10 protein.
          Length = 896

 Score = 32.3 bits (70), Expect = 0.70
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = +3

Query: 24  KTNIYICLAGRCCCWPVCCG 83
           K NIY CLA  CC    CCG
Sbjct: 745 KLNIYTCLASDCCLCCCCCG 764


>AK024636-1|BAB14940.1|  410|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ20983 fis, clone CAE00821. ).
          Length = 410

 Score = 32.3 bits (70), Expect = 0.70
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = +3

Query: 24  KTNIYICLAGRCCCWPVCCG 83
           K NIY CLA  CC    CCG
Sbjct: 115 KLNIYTCLASDCCLCCCCCG 134


>AC105383-1|AAY41018.1| 1040|Homo sapiens unknown protein.
          Length = 1040

 Score = 32.3 bits (70), Expect = 0.70
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = +3

Query: 24  KTNIYICLAGRCCCWPVCCG 83
           K NIY CLA  CC    CCG
Sbjct: 745 KLNIYTCLASDCCLCCCCCG 764


>AB037821-1|BAA92638.1| 1093|Homo sapiens KIAA1400 protein protein.
          Length = 1093

 Score = 32.3 bits (70), Expect = 0.70
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = +3

Query: 24  KTNIYICLAGRCCCWPVCCG 83
           K NIY CLA  CC    CCG
Sbjct: 798 KLNIYTCLASDCCLCCCCCG 817


>BC035194-1|AAH35194.2|  189|Homo sapiens DNAJC5G protein protein.
          Length = 189

 Score = 26.2 bits (55), Expect(2) = 1.9
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 24  KTNIYICLAGRCCCWPVCC 80
           KT + +C    CCC+  CC
Sbjct: 125 KTLVILCTLLTCCCFCCCC 143



 Score = 23.4 bits (48), Expect(2) = 1.9
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +3

Query: 57  CCCWPVCCGSI 89
           CCC   CCG++
Sbjct: 140 CCCCCFCCGAL 150


>AK097736-1|BAC05155.1|  189|Homo sapiens protein ( Homo sapiens
           cDNA FLJ40417 fis, clone TESTI2038388, highly similar to
           Homo sapiens gamma cysteine string protein mRNA. ).
          Length = 189

 Score = 26.2 bits (55), Expect(2) = 1.9
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 24  KTNIYICLAGRCCCWPVCC 80
           KT + +C    CCC+  CC
Sbjct: 125 KTLVILCTLLTCCCFCCCC 143



 Score = 23.4 bits (48), Expect(2) = 1.9
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +3

Query: 57  CCCWPVCCGSI 89
           CCC   CCG++
Sbjct: 140 CCCCCFCCGAL 150


>AC013413-3|AAY24295.1|  189|Homo sapiens unknown protein.
          Length = 189

 Score = 26.2 bits (55), Expect(2) = 1.9
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 24  KTNIYICLAGRCCCWPVCC 80
           KT + +C    CCC+  CC
Sbjct: 125 KTLVILCTLLTCCCFCCCC 143



 Score = 23.4 bits (48), Expect(2) = 1.9
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +3

Query: 57  CCCWPVCCGSI 89
           CCC   CCG++
Sbjct: 140 CCCCCFCCGAL 150


>AF368277-1|AAK60572.1|  109|Homo sapiens gamma cysteine string
           protein protein.
          Length = 109

 Score = 26.2 bits (55), Expect(2) = 2.0
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 24  KTNIYICLAGRCCCWPVCC 80
           KT + +C    CCC+  CC
Sbjct: 69  KTLVILCTLLTCCCFCCCC 87



 Score = 23.4 bits (48), Expect(2) = 2.0
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +3

Query: 57  CCCWPVCCGSI 89
           CCC   CCG++
Sbjct: 84  CCCCCFCCGAL 94


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,293,562
Number of Sequences: 237096
Number of extensions: 1107056
Number of successful extensions: 3048
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2955
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3316445452
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)