Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_O20
(432 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_49233| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.014
SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.033
SB_49037| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.13
SB_47269| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.40
SB_42083| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.40
SB_28644| Best HMM Match : zf-CCCH (HMM E-Value=1.5e-05) 31 0.40
SB_29121| Best HMM Match : Toxin_12 (HMM E-Value=8.7) 30 0.93
SB_45794| Best HMM Match : zf-CCCH (HMM E-Value=3.1e-27) 29 1.6
SB_14329| Best HMM Match : RRM_1 (HMM E-Value=3.5e-05) 29 1.6
SB_48455| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_2244| Best HMM Match : zf-CCCH (HMM E-Value=0.004) 29 2.2
SB_54| Best HMM Match : Actin (HMM E-Value=0) 28 3.8
SB_38162| Best HMM Match : zf-CCCH (HMM E-Value=0.018) 28 3.8
SB_39703| Best HMM Match : PHD (HMM E-Value=9.3e-12) 27 5.0
SB_20294| Best HMM Match : Orthopox_F6 (HMM E-Value=8.1) 27 5.0
SB_282| Best HMM Match : zf-CCCH (HMM E-Value=2.4e-10) 27 5.0
SB_46020| Best HMM Match : PHD (HMM E-Value=9.3e-12) 27 5.0
SB_38979| Best HMM Match : I-set (HMM E-Value=0.11) 27 5.0
SB_28647| Best HMM Match : Ribosomal_L36 (HMM E-Value=1) 27 5.0
SB_11786| Best HMM Match : Complex1_LYR (HMM E-Value=5.6) 27 5.0
SB_24485| Best HMM Match : zf-CCCH (HMM E-Value=3e-09) 27 6.6
SB_11425| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.6
SB_2435| Best HMM Match : WD40 (HMM E-Value=4.1e-10) 27 6.6
SB_52222| Best HMM Match : SAPS (HMM E-Value=2.1e-37) 27 8.7
SB_53037| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_34807| Best HMM Match : zf-CCCH (HMM E-Value=4.6e-07) 27 8.7
>SB_49233| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 309
Score = 35.9 bits (79), Expect = 0.014
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
Frame = +2
Query: 227 DRTVVCKHWLRGLCKKGDQCEFLHEYDMS---KMPE--CYFYARFNACHNKECPFLHIDP 391
D +C+ + RG+C +G +C+F H M + P C Y C+ C ++HI
Sbjct: 33 DENNICRDYQRGVCNRGGKCKFRHPEGMGIELQSPPMICRDYQN-GKCNRSTCKYMHISN 91
Query: 392 ESK 400
+ +
Sbjct: 92 DDE 94
Score = 29.5 bits (63), Expect = 1.2
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +2
Query: 239 VCKHWLRGLCKKGDQCEFLHEYDMSK 316
+CK +L C +G+ C+F H ++ K
Sbjct: 141 ICKDFLNNKCSRGNLCKFRHAFEDDK 166
>SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 34.7 bits (76), Expect = 0.033
Identities = 9/29 (31%), Positives = 20/29 (68%)
Frame = +2
Query: 215 HVRGDRTVVCKHWLRGLCKKGDQCEFLHE 301
+ + +R +C W++G CK+G++C + H+
Sbjct: 228 YYKRNRPHICSFWVKGECKRGEECPYRHD 256
>SB_49037| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2142
Score = 32.7 bits (71), Expect = 0.13
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 233 TVVCKHWLRGLCKKGDQCEFLHEYDMS-KMPECY 331
T+ C+ + +G C KGD+C +LH + S MP +
Sbjct: 1348 TIPCRFFAKGNCLKGDRCLYLHAQEASHPMPPTF 1381
>SB_47269| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 720
Score = 31.1 bits (67), Expect = 0.40
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +2
Query: 239 VCKHWLRGLCKKGDQCEFLHEY 304
VC+H++ G CK GD C+ +H +
Sbjct: 187 VCQHFVDGKCKFGDTCKRVHHF 208
Score = 27.5 bits (58), Expect = 5.0
Identities = 8/27 (29%), Positives = 15/27 (55%)
Frame = +2
Query: 239 VCKHWLRGLCKKGDQCEFLHEYDMSKM 319
VC ++++G C G +C H+ S +
Sbjct: 99 VCPYYIKGKCAHGQKCRLSHKIQSSSL 125
>SB_42083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 489
Score = 31.1 bits (67), Expect = 0.40
Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 5/62 (8%)
Frame = +2
Query: 239 VCKHWLRGLCKKGD-----QCEFLHEYDMSKMPECYFYARFNACHNKECPFLHIDPESKI 403
VC HW G C+ + C + Y+++ P CYF N L P + +
Sbjct: 108 VCYHWTTGCCEWSNNIRVRNCGEFYVYELNGTPHCYFRYCGNGAAKNRTDSLSPGPTTIV 167
Query: 404 KD 409
+D
Sbjct: 168 ED 169
>SB_28644| Best HMM Match : zf-CCCH (HMM E-Value=1.5e-05)
Length = 267
Score = 31.1 bits (67), Expect = 0.40
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +2
Query: 242 CKHWLRGLCKKGDQCEFLHE 301
C+H+L+G C GD C++ H+
Sbjct: 141 CRHFLKGNCWHGDNCKYSHD 160
>SB_29121| Best HMM Match : Toxin_12 (HMM E-Value=8.7)
Length = 497
Score = 29.9 bits (64), Expect = 0.93
Identities = 15/96 (15%), Positives = 38/96 (39%)
Frame = +2
Query: 140 KSTAAVCEFFSXXXXXXXXXXXXYRHVRGDRTVVCKHWLRGLCKKGDQCEFLHEYDMSKM 319
++ + VC ++ Y +R++VC +++R + C + ++
Sbjct: 75 QNRSLVCVYYMRTSQNQSLVCVYYMRTSQNRSLVCVYYMRTSQNQSLVCVYYMRTSQNRS 134
Query: 320 PECYFYARFNACHNKECPFLHIDPESKIKDCPWYDR 427
C +Y R + + C + +++ C +Y R
Sbjct: 135 LVCVYYMRTSQNQSLVCVYYMCTSQNRSLVCVYYMR 170
Score = 29.1 bits (62), Expect = 1.6
Identities = 15/96 (15%), Positives = 38/96 (39%)
Frame = +2
Query: 140 KSTAAVCEFFSXXXXXXXXXXXXYRHVRGDRTVVCKHWLRGLCKKGDQCEFLHEYDMSKM 319
++ + VC ++ Y +R++VC +++R + C + ++
Sbjct: 47 QNQSLVCVYYMRTSQNQSLVCVYYMRTSQNRSLVCVYYMRTSQNQSLVCVYYMRTSQNRS 106
Query: 320 PECYFYARFNACHNKECPFLHIDPESKIKDCPWYDR 427
C +Y R + + C + +++ C +Y R
Sbjct: 107 LVCVYYMRTSQNQSLVCVYYMRTSQNRSLVCVYYMR 142
Score = 27.1 bits (57), Expect = 6.6
Identities = 15/96 (15%), Positives = 38/96 (39%)
Frame = +2
Query: 140 KSTAAVCEFFSXXXXXXXXXXXXYRHVRGDRTVVCKHWLRGLCKKGDQCEFLHEYDMSKM 319
++ + VC ++ Y +R++VC +++R + C + ++
Sbjct: 103 QNRSLVCVYYMRTSQNQSLVCVYYMRTSQNRSLVCVYYMRTSQNQSLVCVYYMCTSQNRS 162
Query: 320 PECYFYARFNACHNKECPFLHIDPESKIKDCPWYDR 427
C +Y R + + C + +++ C +Y R
Sbjct: 163 LVCVYYMRTSQNQSLVCVYYMRTSQNQSLVCVYYMR 198
>SB_45794| Best HMM Match : zf-CCCH (HMM E-Value=3.1e-27)
Length = 527
Score = 29.1 bits (62), Expect = 1.6
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 11/68 (16%)
Frame = +2
Query: 230 RTVVCKHWLR-GLCKKGDQCEFLHEY----DMSKMPE-----CYFYARFNAC-HNKECPF 376
+T +C+ + G CK GD+C+F H Y +++ P+ C + C + C F
Sbjct: 156 KTELCRPFEESGTCKYGDKCQFAHGYHELRQLARHPKYKTELCRTFHTIGFCPYGPRCHF 215
Query: 377 LHIDPESK 400
+H E +
Sbjct: 216 IHNADEKR 223
>SB_14329| Best HMM Match : RRM_1 (HMM E-Value=3.5e-05)
Length = 365
Score = 29.1 bits (62), Expect = 1.6
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 7/51 (13%)
Frame = +2
Query: 212 RHVRGDRTVVCKHWLRGLCKKGDQCEFLHEYDMSK-------MPECYFYAR 343
R D +C ++ RG C G +C ++HE +K M +C+F R
Sbjct: 59 RGTNRDDAGICLNFARGCCPLGFECSWIHEIPDAKFNVKQETMRDCFFRER 109
>SB_48455| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 622
Score = 28.7 bits (61), Expect = 2.2
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -2
Query: 335 RNNIQAFSTCHIHGGIHTDLLSCTTLLAN 249
R ++A S CH +G IH DL LLAN
Sbjct: 30 RQVLEAVSFCHENGIIHRDLKPHNVLLAN 58
>SB_2244| Best HMM Match : zf-CCCH (HMM E-Value=0.004)
Length = 445
Score = 28.7 bits (61), Expect = 2.2
Identities = 12/22 (54%), Positives = 17/22 (77%), Gaps = 2/22 (9%)
Frame = +2
Query: 239 VCKHWL--RGLCKKGDQCEFLH 298
VC+H++ RG C +G+QC FLH
Sbjct: 417 VCRHFVSNRG-CLRGEQCHFLH 437
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 27.9 bits (59), Expect = 3.8
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -2
Query: 353 KH*SEHRNNIQAFSTCHIHGGIHTDLLSCTT 261
+H + N +Q++ H G IH D LSCTT
Sbjct: 96 QHLKKSMNKVQSW--IHQRGSIHLDKLSCTT 124
>SB_38162| Best HMM Match : zf-CCCH (HMM E-Value=0.018)
Length = 541
Score = 27.9 bits (59), Expect = 3.8
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = +2
Query: 266 CKKGDQCEFLHEYDMSKMPECYFYARFNACHNKECPFLH 382
C G C F+H P C F R C N CP+LH
Sbjct: 455 CPYGKSCMFVH-------PSCKFDGR---CTNSMCPYLH 483
>SB_39703| Best HMM Match : PHD (HMM E-Value=9.3e-12)
Length = 886
Score = 27.5 bits (58), Expect = 5.0
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +2
Query: 266 CKKGDQCEFLHEYDMSKMPECYFYARFNACHNKECPFLHIDPESKIK-DC 412
CK +Q +E+ M + + R NK+ PF+H P+ I DC
Sbjct: 246 CKYEEQAIKSYEHHMKSLHTNFQIKRCGLFINKDFPFIHATPDFLISCDC 295
>SB_20294| Best HMM Match : Orthopox_F6 (HMM E-Value=8.1)
Length = 242
Score = 27.5 bits (58), Expect = 5.0
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +2
Query: 266 CKKGDQCEFLHEYDMSKMPECYFYARFNACHNKECPFLHIDPESKIK-DC 412
CK +Q +E+ M + + R NK+ PF+H P+ I DC
Sbjct: 176 CKYEEQAIKSYEHHMKSLHTNFQIKRCGLFINKDFPFIHATPDFLISCDC 225
>SB_282| Best HMM Match : zf-CCCH (HMM E-Value=2.4e-10)
Length = 508
Score = 27.5 bits (58), Expect = 5.0
Identities = 11/30 (36%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +2
Query: 230 RTVVCKHWLR-GLCKKGDQCEFLHEYDMSK 316
R VC+ + + G C+ G++C F+H+ +SK
Sbjct: 39 RQKVCRFYAKKGNCRFGEKCRFVHKEIISK 68
>SB_46020| Best HMM Match : PHD (HMM E-Value=9.3e-12)
Length = 824
Score = 27.5 bits (58), Expect = 5.0
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +2
Query: 266 CKKGDQCEFLHEYDMSKMPECYFYARFNACHNKECPFLHIDPESKIK-DC 412
CK +Q +E+ M + + R NK+ PF+H P+ I DC
Sbjct: 287 CKYEEQAIKSYEHHMKSLHTNFQIKRCGLFINKDFPFIHATPDFLISCDC 336
>SB_38979| Best HMM Match : I-set (HMM E-Value=0.11)
Length = 569
Score = 27.5 bits (58), Expect = 5.0
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -3
Query: 271 LAQPS*PMFTHDCTITTNMSVWTLRAIATTSR 176
L P PM H+C + +S W L + T +R
Sbjct: 127 LGIPYYPMIIHNCLVENRLSDWHLTHLGTVAR 158
>SB_28647| Best HMM Match : Ribosomal_L36 (HMM E-Value=1)
Length = 812
Score = 27.5 bits (58), Expect = 5.0
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = -2
Query: 236 LYDHHEHVCMDTEGHCHNLQAD*RIHTLLLLI 141
+ HH H+C H H+ Q + H +++I
Sbjct: 767 IQQHHNHICQQQNRHNHHCQHNYYYHFYIIVI 798
>SB_11786| Best HMM Match : Complex1_LYR (HMM E-Value=5.6)
Length = 656
Score = 27.5 bits (58), Expect = 5.0
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -3
Query: 271 LAQPS*PMFTHDCTITTNMSVWTLRAIATTSR 176
L P PM H+C + +S W L + T +R
Sbjct: 298 LGIPYYPMIIHNCLVENRLSDWHLTHLGTVAR 329
>SB_24485| Best HMM Match : zf-CCCH (HMM E-Value=3e-09)
Length = 321
Score = 27.1 bits (57), Expect = 6.6
Identities = 10/22 (45%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +2
Query: 239 VCKHWLR-GLCKKGDQCEFLHE 301
+CK + G C GD C+FLH+
Sbjct: 183 ICKDYKETGFCGFGDSCKFLHD 204
>SB_11425| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 339
Score = 27.1 bits (57), Expect = 6.6
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = +2
Query: 224 GDRTVVCKHWLRGLCKKGDQCEFLHEYDMSK 316
G++ C ++ +G C G +C F+H K
Sbjct: 182 GNKHYYCIYFAKGCCHLGAECGFIHSIPTEK 212
>SB_2435| Best HMM Match : WD40 (HMM E-Value=4.1e-10)
Length = 1272
Score = 27.1 bits (57), Expect = 6.6
Identities = 12/41 (29%), Positives = 17/41 (41%)
Frame = +1
Query: 37 YGSYRGQCGSHKIRYRFCFRRTIWSITTTFPWNGQINSSSV 159
YG Y + ++ + C+R IW P N SS V
Sbjct: 290 YGEYPAKYSNNMVNITLCYRMFIWRSLLKLPENHSAYSSLV 330
>SB_52222| Best HMM Match : SAPS (HMM E-Value=2.1e-37)
Length = 1063
Score = 26.6 bits (56), Expect = 8.7
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -1
Query: 303 YSWRNSH*SPFLHNPLSQCLHTTVRSPRT 217
YSW N FLH + QC+ T + +P T
Sbjct: 385 YSWNN-----FLHTQVEQCICTILNNPPT 408
>SB_53037| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 499
Score = 26.6 bits (56), Expect = 8.7
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = +2
Query: 239 VCKHWLRGLCKKGDQCEFLH 298
VC + +G C+ G++C+F+H
Sbjct: 110 VCWKFQKGKCRFGEKCKFVH 129
>SB_34807| Best HMM Match : zf-CCCH (HMM E-Value=4.6e-07)
Length = 505
Score = 26.6 bits (56), Expect = 8.7
Identities = 9/24 (37%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = +2
Query: 230 RTVVCKHW-LRGLCKKGDQCEFLH 298
+ +C+++ G C GDQC+F+H
Sbjct: 14 KPTLCRYFSANGYCFYGDQCQFVH 37
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,863,877
Number of Sequences: 59808
Number of extensions: 296343
Number of successful extensions: 872
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 868
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 822495283
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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