Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_O19
(367 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF047656-13|AAC05105.1| 313|Caenorhabditis elegans Collagen pro... 41 3e-04
U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resist... 33 0.083
M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.ele... 33 0.083
Z70208-1|CAA94141.1| 339|Caenorhabditis elegans Hypothetical pr... 32 0.14
Z73969-6|CAA98236.1| 295|Caenorhabditis elegans Hypothetical pr... 29 0.77
Z71178-1|CAA94874.1| 297|Caenorhabditis elegans Hypothetical pr... 29 1.0
Z68113-3|CAA92150.1| 333|Caenorhabditis elegans Hypothetical pr... 29 1.0
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 29 1.0
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 29 1.0
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 29 1.0
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 29 1.0
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 29 1.0
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 29 1.0
AL117207-22|CAO82073.1| 505|Caenorhabditis elegans Hypothetical... 29 1.3
Z71262-8|CAA95812.1| 302|Caenorhabditis elegans Hypothetical pr... 28 1.8
Z70307-11|CAA94337.1| 488|Caenorhabditis elegans Hypothetical p... 28 1.8
Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical pr... 28 2.4
Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical pr... 28 2.4
X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) coll... 28 2.4
U70849-7|AAF99925.2| 332|Caenorhabditis elegans Collagen protei... 27 3.1
U42841-13|AAC48170.1| 682|Caenorhabditis elegans Hypothetical p... 27 4.1
AF003142-1|AAB54189.2| 389|Caenorhabditis elegans Hypothetical ... 27 4.1
U00049-3|AAC47059.1| 339|Caenorhabditis elegans Serpentine rece... 27 5.4
AL117195-29|CAB55017.2| 204|Caenorhabditis elegans Hypothetical... 27 5.4
AF000263-19|AAG00021.1| 321|Caenorhabditis elegans Collagen pro... 27 5.4
Z77132-3|CAB00860.1| 310|Caenorhabditis elegans Hypothetical pr... 26 7.2
Z77132-2|CAB00858.1| 294|Caenorhabditis elegans Hypothetical pr... 26 7.2
U50312-9|AAA92325.1| 294|Caenorhabditis elegans Collagen protei... 26 7.2
U50312-7|AAA92323.2| 306|Caenorhabditis elegans Collagen protei... 26 7.2
U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical pr... 26 7.2
AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-li... 26 7.2
AF039046-10|AAB94220.2| 233|Caenorhabditis elegans Serpentine r... 26 7.2
AF039046-9|AAX22285.1| 341|Caenorhabditis elegans Serpentine re... 26 7.2
Z81594-1|CAB04745.1| 908|Caenorhabditis elegans Hypothetical pr... 26 9.5
Z70682-4|CAA94581.1| 299|Caenorhabditis elegans Hypothetical pr... 26 9.5
U50312-8|AAA92324.1| 294|Caenorhabditis elegans Collagen protei... 26 9.5
U41990-3|AAY44010.1| 291|Caenorhabditis elegans Hypothetical pr... 26 9.5
U40942-4|AAC47069.2| 486|Caenorhabditis elegans Hypothetical pr... 26 9.5
U40942-3|AAU05564.1| 487|Caenorhabditis elegans Hypothetical pr... 26 9.5
AL032642-3|CAA21654.1| 336|Caenorhabditis elegans Hypothetical ... 26 9.5
AF100306-10|AAC68926.1| 798|Caenorhabditis elegans Hypothetical... 26 9.5
>AF047656-13|AAC05105.1| 313|Caenorhabditis elegans Collagen
protein 116 protein.
Length = 313
Score = 40.7 bits (91), Expect = 3e-04
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = -3
Query: 335 CRPMEHHYCPPREPGLDXSQGCD-QPRAPGLDNSQGYDRLRAPGLDYSQGCDRLRAP 168
C P H CPP PG+ G D P PGLD G R +DY+ G + ++ P
Sbjct: 100 CAPATSH-CPPGPPGIFGPPGEDGTPGEPGLDGDPGTTATRQMAMDYTGGSECVKCP 155
Score = 27.9 bits (59), Expect = 2.4
Identities = 23/64 (35%), Positives = 26/64 (40%)
Frame = -3
Query: 308 PPREPGLDXSQGCDQPRAPGLDNSQGYDRLRAPGLDYSQGCDRLRAPGLDYSQGCN*LRA 129
PP PG QGC P D G ++ PG + G PG S G N A
Sbjct: 194 PPGPPGYPGRQGCQGKDGPSGD--PGLRFIKTPGPVGAAGPP--GPPGPPGSPGENTEGA 249
Query: 128 PGLD 117
PGLD
Sbjct: 250 PGLD 253
Score = 25.8 bits (54), Expect = 9.5
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = -3
Query: 308 PPREPGLDXSQGCDQPRAPGLDNSQG-YDRLRAPGLDYSQG 189
PP PG S G + APGLD G + PG D + G
Sbjct: 232 PPGPPGPPGSPGENTEGAPGLDGPLGPPGKPGTPGTDGAPG 272
>U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resistant
protein 1 protein.
Length = 1852
Score = 32.7 bits (71), Expect = 0.083
Identities = 15/62 (24%), Positives = 23/62 (37%)
Frame = +2
Query: 104 NPDYNPGQVHVVNYNPDYNPGQVHVVDHNPDYNPGQVHVVDHNPDYYPGQVHVVDHNPDY 283
+P Y+P +P Y+P +P Y+P +P Y P +P Y
Sbjct: 1623 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPRYSPTSPTY 1682
Query: 284 XP 289
P
Sbjct: 1683 SP 1684
Score = 31.9 bits (69), Expect = 0.14
Identities = 15/62 (24%), Positives = 23/62 (37%)
Frame = +2
Query: 104 NPDYNPGQVHVVNYNPDYNPGQVHVVDHNPDYNPGQVHVVDHNPDYYPGQVHVVDHNPDY 283
+P Y+P +P Y+P +P Y+P +P Y P +P Y
Sbjct: 1609 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSY 1668
Query: 284 XP 289
P
Sbjct: 1669 SP 1670
Score = 31.9 bits (69), Expect = 0.14
Identities = 15/62 (24%), Positives = 23/62 (37%)
Frame = +2
Query: 104 NPDYNPGQVHVVNYNPDYNPGQVHVVDHNPDYNPGQVHVVDHNPDYYPGQVHVVDHNPDY 283
+P Y+P +P Y+P +P Y+P +P Y P +P Y
Sbjct: 1637 SPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTY 1696
Query: 284 XP 289
P
Sbjct: 1697 SP 1698
Score = 31.5 bits (68), Expect = 0.19
Identities = 15/62 (24%), Positives = 23/62 (37%)
Frame = +2
Query: 104 NPDYNPGQVHVVNYNPDYNPGQVHVVDHNPDYNPGQVHVVDHNPDYYPGQVHVVDHNPDY 283
+P Y+P +P Y+P +P Y+P +P Y P +P Y
Sbjct: 1616 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPRY 1675
Query: 284 XP 289
P
Sbjct: 1676 SP 1677
Score = 30.7 bits (66), Expect = 0.33
Identities = 15/62 (24%), Positives = 23/62 (37%)
Frame = +2
Query: 104 NPDYNPGQVHVVNYNPDYNPGQVHVVDHNPDYNPGQVHVVDHNPDYYPGQVHVVDHNPDY 283
+P Y+P +P Y+P +P Y+P +P Y P +P Y
Sbjct: 1630 SPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPRYSPTSPTYSPTSPTY 1689
Query: 284 XP 289
P
Sbjct: 1690 SP 1691
Score = 29.9 bits (64), Expect = 0.58
Identities = 15/63 (23%), Positives = 23/63 (36%)
Frame = +2
Query: 104 NPDYNPGQVHVVNYNPDYNPGQVHVVDHNPDYNPGQVHVVDHNPDYYPGQVHVVDHNPDY 283
+P Y+P +P Y+P +P Y+P +P Y P +P Y
Sbjct: 1651 SPSYSPSSPSYSPSSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSY 1710
Query: 284 XPG 292
G
Sbjct: 1711 ESG 1713
Score = 29.5 bits (63), Expect = 0.77
Identities = 15/62 (24%), Positives = 23/62 (37%)
Frame = +2
Query: 104 NPDYNPGQVHVVNYNPDYNPGQVHVVDHNPDYNPGQVHVVDHNPDYYPGQVHVVDHNPDY 283
+P Y+P +P Y+P +P Y+P +P Y P +P Y
Sbjct: 1644 SPSYSPTSPSYSPSSPSYSPSSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSPTSPTY 1703
Query: 284 XP 289
P
Sbjct: 1704 SP 1705
Score = 29.1 bits (62), Expect = 1.0
Identities = 15/62 (24%), Positives = 23/62 (37%)
Frame = +2
Query: 104 NPDYNPGQVHVVNYNPDYNPGQVHVVDHNPDYNPGQVHVVDHNPDYYPGQVHVVDHNPDY 283
+P Y+P +P Y+P +P Y+P +P Y P +P Y
Sbjct: 1720 SPKYSPSSPTYSPTSPSYSPTSPQYSPTSPQYSPSSPTYTPSSPTYNPTSPRGFS-SPQY 1778
Query: 284 XP 289
P
Sbjct: 1779 SP 1780
Score = 27.9 bits (59), Expect = 2.4
Identities = 14/62 (22%), Positives = 20/62 (32%)
Frame = +2
Query: 104 NPDYNPGQVHVVNYNPDYNPGQVHVVDHNPDYNPGQVHVVDHNPDYYPGQVHVVDHNPDY 283
+P Y P +P Y P + Y+P +P Y P +P Y
Sbjct: 1789 SPSYTPSSPQYSPTSPTYTPSPSEQPGTSAQYSPTSPTYSPSSPTYSPASPSYSPSSPTY 1848
Query: 284 XP 289
P
Sbjct: 1849 DP 1850
Score = 27.1 bits (57), Expect = 4.1
Identities = 14/62 (22%), Positives = 20/62 (32%)
Frame = +2
Query: 104 NPDYNPGQVHVVNYNPDYNPGQVHVVDHNPDYNPGQVHVVDHNPDYYPGQVHVVDHNPDY 283
+P Y+P +P Y P +P Y P + Y P +P Y
Sbjct: 1775 SPQYSPTSPTYSPTSPSYTPSSPQYSPTSPTYTPSPSEQPGTSAQYSPTSPTYSPSSPTY 1834
Query: 284 XP 289
P
Sbjct: 1835 SP 1836
>M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.elegans
RNA polymeraseII largest subunit (ama-1 IV) gene,
complete cds. ).
Length = 1859
Score = 32.7 bits (71), Expect = 0.083
Identities = 15/62 (24%), Positives = 23/62 (37%)
Frame = +2
Query: 104 NPDYNPGQVHVVNYNPDYNPGQVHVVDHNPDYNPGQVHVVDHNPDYYPGQVHVVDHNPDY 283
+P Y+P +P Y+P +P Y+P +P Y P +P Y
Sbjct: 1630 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPRYSPTSPTY 1689
Query: 284 XP 289
P
Sbjct: 1690 SP 1691
Score = 31.9 bits (69), Expect = 0.14
Identities = 15/62 (24%), Positives = 23/62 (37%)
Frame = +2
Query: 104 NPDYNPGQVHVVNYNPDYNPGQVHVVDHNPDYNPGQVHVVDHNPDYYPGQVHVVDHNPDY 283
+P Y+P +P Y+P +P Y+P +P Y P +P Y
Sbjct: 1616 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSY 1675
Query: 284 XP 289
P
Sbjct: 1676 SP 1677
Score = 31.9 bits (69), Expect = 0.14
Identities = 15/62 (24%), Positives = 23/62 (37%)
Frame = +2
Query: 104 NPDYNPGQVHVVNYNPDYNPGQVHVVDHNPDYNPGQVHVVDHNPDYYPGQVHVVDHNPDY 283
+P Y+P +P Y+P +P Y+P +P Y P +P Y
Sbjct: 1644 SPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTY 1703
Query: 284 XP 289
P
Sbjct: 1704 SP 1705
Score = 31.5 bits (68), Expect = 0.19
Identities = 15/62 (24%), Positives = 23/62 (37%)
Frame = +2
Query: 104 NPDYNPGQVHVVNYNPDYNPGQVHVVDHNPDYNPGQVHVVDHNPDYYPGQVHVVDHNPDY 283
+P Y+P +P Y+P +P Y+P +P Y P +P Y
Sbjct: 1623 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPRY 1682
Query: 284 XP 289
P
Sbjct: 1683 SP 1684
Score = 30.7 bits (66), Expect = 0.33
Identities = 15/62 (24%), Positives = 23/62 (37%)
Frame = +2
Query: 104 NPDYNPGQVHVVNYNPDYNPGQVHVVDHNPDYNPGQVHVVDHNPDYYPGQVHVVDHNPDY 283
+P Y+P +P Y+P +P Y+P +P Y P +P Y
Sbjct: 1637 SPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPRYSPTSPTYSPTSPTY 1696
Query: 284 XP 289
P
Sbjct: 1697 SP 1698
Score = 29.9 bits (64), Expect = 0.58
Identities = 15/63 (23%), Positives = 23/63 (36%)
Frame = +2
Query: 104 NPDYNPGQVHVVNYNPDYNPGQVHVVDHNPDYNPGQVHVVDHNPDYYPGQVHVVDHNPDY 283
+P Y+P +P Y+P +P Y+P +P Y P +P Y
Sbjct: 1658 SPSYSPSSPSYSPSSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSY 1717
Query: 284 XPG 292
G
Sbjct: 1718 ESG 1720
Score = 29.5 bits (63), Expect = 0.77
Identities = 15/62 (24%), Positives = 23/62 (37%)
Frame = +2
Query: 104 NPDYNPGQVHVVNYNPDYNPGQVHVVDHNPDYNPGQVHVVDHNPDYYPGQVHVVDHNPDY 283
+P Y+P +P Y+P +P Y+P +P Y P +P Y
Sbjct: 1651 SPSYSPTSPSYSPSSPSYSPSSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSPTSPTY 1710
Query: 284 XP 289
P
Sbjct: 1711 SP 1712
Score = 29.1 bits (62), Expect = 1.0
Identities = 15/62 (24%), Positives = 23/62 (37%)
Frame = +2
Query: 104 NPDYNPGQVHVVNYNPDYNPGQVHVVDHNPDYNPGQVHVVDHNPDYYPGQVHVVDHNPDY 283
+P Y+P +P Y+P +P Y+P +P Y P +P Y
Sbjct: 1727 SPKYSPSSPTYSPTSPSYSPTSPQYSPTSPQYSPSSPTYTPSSPTYNPTSPRGFS-SPQY 1785
Query: 284 XP 289
P
Sbjct: 1786 SP 1787
Score = 27.9 bits (59), Expect = 2.4
Identities = 14/62 (22%), Positives = 20/62 (32%)
Frame = +2
Query: 104 NPDYNPGQVHVVNYNPDYNPGQVHVVDHNPDYNPGQVHVVDHNPDYYPGQVHVVDHNPDY 283
+P Y P +P Y P + Y+P +P Y P +P Y
Sbjct: 1796 SPSYTPSSPQYSPTSPTYTPSPSEQPGTSAQYSPTSPTYSPSSPTYSPASPSYSPSSPTY 1855
Query: 284 XP 289
P
Sbjct: 1856 DP 1857
Score = 27.1 bits (57), Expect = 4.1
Identities = 14/62 (22%), Positives = 20/62 (32%)
Frame = +2
Query: 104 NPDYNPGQVHVVNYNPDYNPGQVHVVDHNPDYNPGQVHVVDHNPDYYPGQVHVVDHNPDY 283
+P Y+P +P Y P +P Y P + Y P +P Y
Sbjct: 1782 SPQYSPTSPTYSPTSPSYTPSSPQYSPTSPTYTPSPSEQPGTSAQYSPTSPTYSPSSPTY 1841
Query: 284 XP 289
P
Sbjct: 1842 SP 1843
>Z70208-1|CAA94141.1| 339|Caenorhabditis elegans Hypothetical
protein F54B11.1 protein.
Length = 339
Score = 31.9 bits (69), Expect = 0.14
Identities = 23/64 (35%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Frame = -3
Query: 308 PPREPGLDXSQG-CDQPRAPGLDNSQGYDRLRAPGLDYSQGCDRLRAPGLDYSQGCN*LR 132
PP PG + G QP +PG G APG G + PGLD G N
Sbjct: 225 PPGPPGQPGNHGLAGQPGSPGQSVLGGIVGFAAPGPMGPPGL--MGPPGLDAQNGANGFG 282
Query: 131 APGL 120
PGL
Sbjct: 283 PPGL 286
>Z73969-6|CAA98236.1| 295|Caenorhabditis elegans Hypothetical
protein C12D8.8 protein.
Length = 295
Score = 29.5 bits (63), Expect = 0.77
Identities = 21/57 (36%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Frame = -3
Query: 308 PPREPGLDXSQGCD-QPRAPGLDNSQGYDRLRAPGLDYSQGCDRLRAPGLDYSQGCN 141
PP E G G D QP G D +GY APG G PG+D G N
Sbjct: 189 PPGENGQPGQSGKDGQPGRNGADGKRGYGAPGAPGAQGKPGPS--GPPGIDGYPGQN 243
Score = 26.2 bits (55), Expect = 7.2
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = -3
Query: 335 CRPMEHHYCPPREPGLDXSQGCDQPRAPGLDNSQGYD 225
C P + CPP PG QG Q PG+ +G D
Sbjct: 96 CEPTKP-ICPPGPPGQPGQQG--QKGPPGVPGQRGQD 129
>Z71178-1|CAA94874.1| 297|Caenorhabditis elegans Hypothetical
protein B0024.1 protein.
Length = 297
Score = 29.1 bits (62), Expect = 1.0
Identities = 21/69 (30%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
Frame = -3
Query: 308 PPREPGLDXSQGCDQPRAPGLDNSQGYDRLRAPGL-DYSQGCDRLRAPGLDYSQGCN*LR 132
PP PG +G P PG + Y+ +RAP +Q C + A S C +
Sbjct: 108 PPGPPGHPGQRGI--PGIPGRNGQDNYNTIRAPACPPRNQDCIKCPAGPPGPSGTCGQVG 165
Query: 131 APGLDYNQG 105
PG D G
Sbjct: 166 RPGPDGRPG 174
>Z68113-3|CAA92150.1| 333|Caenorhabditis elegans Hypothetical
protein E03G2.4 protein.
Length = 333
Score = 29.1 bits (62), Expect = 1.0
Identities = 24/73 (32%), Positives = 27/73 (36%), Gaps = 1/73 (1%)
Frame = -3
Query: 362 GSQ*LRGHYCRPMEHHYCPPREPGLDXSQGCD-QPRAPGLDNSQGYDRLRAPGLDYSQGC 186
GSQ G C + PP PG D S G D + PG D AP D+ C
Sbjct: 130 GSQGGGGGCCGCGQSPPGPPGRPGSDGSPGSDGEAGIPGRDGPDAPRATPAPNFDWCFDC 189
Query: 185 DRLRAPGLDYSQG 147
PG QG
Sbjct: 190 PP-GEPGRQGKQG 201
Score = 27.1 bits (57), Expect = 4.1
Identities = 17/42 (40%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = -3
Query: 311 CPPREPGLDXSQGCDQPRAPGLDNSQGYDRLRA-PGLDYSQG 189
CPP EPG QG P PG G + PGL S G
Sbjct: 189 CPPGEPGRQGKQGRKGP--PGRPGGSGLPGDKGLPGLPGSMG 228
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 29.1 bits (62), Expect = 1.0
Identities = 19/54 (35%), Positives = 21/54 (38%)
Frame = -3
Query: 308 PPREPGLDXSQGCDQPRAPGLDNSQGYDRLRAPGLDYSQGCDRLRAPGLDYSQG 147
P EPG + G P PG D G D APG G +R P D G
Sbjct: 445 PKGEPGYRGTPGQSIPGLPGKDGKPGLD--GAPGRKGENGLPGVRGPPGDSLNG 496
Score = 27.5 bits (58), Expect = 3.1
Identities = 19/54 (35%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Frame = -3
Query: 305 PREPGLDXSQGCDQPRAPGLDNSQGYDRLRAPGLDYSQGCDRL-RAPGLDYSQG 147
P +PG + P APGL G+ L PG G L APGL G
Sbjct: 1263 PGQPGQSIAGPVGPPGAPGLQGKDGFPGL--PGQKGESGLSGLPGAPGLKGESG 1314
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 29.1 bits (62), Expect = 1.0
Identities = 19/54 (35%), Positives = 21/54 (38%)
Frame = -3
Query: 308 PPREPGLDXSQGCDQPRAPGLDNSQGYDRLRAPGLDYSQGCDRLRAPGLDYSQG 147
P EPG + G P PG D G D APG G +R P D G
Sbjct: 444 PKGEPGYRGTPGQSIPGLPGKDGKPGLD--GAPGRKGENGLPGVRGPPGDSLNG 495
Score = 27.5 bits (58), Expect = 3.1
Identities = 19/54 (35%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Frame = -3
Query: 305 PREPGLDXSQGCDQPRAPGLDNSQGYDRLRAPGLDYSQGCDRL-RAPGLDYSQG 147
P +PG + P APGL G+ L PG G L APGL G
Sbjct: 1262 PGQPGQSIAGPVGPPGAPGLQGKDGFPGL--PGQKGESGLSGLPGAPGLKGESG 1313
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 29.1 bits (62), Expect = 1.0
Identities = 19/54 (35%), Positives = 21/54 (38%)
Frame = -3
Query: 308 PPREPGLDXSQGCDQPRAPGLDNSQGYDRLRAPGLDYSQGCDRLRAPGLDYSQG 147
P EPG + G P PG D G D APG G +R P D G
Sbjct: 444 PKGEPGYRGTPGQSIPGLPGKDGKPGLD--GAPGRKGENGLPGVRGPPGDSLNG 495
Score = 27.5 bits (58), Expect = 3.1
Identities = 19/54 (35%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Frame = -3
Query: 305 PREPGLDXSQGCDQPRAPGLDNSQGYDRLRAPGLDYSQGCDRL-RAPGLDYSQG 147
P +PG + P APGL G+ L PG G L APGL G
Sbjct: 1262 PGQPGQSIAGPVGPPGAPGLQGKDGFPGL--PGQKGESGLSGLPGAPGLKGESG 1313
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 29.1 bits (62), Expect = 1.0
Identities = 19/54 (35%), Positives = 21/54 (38%)
Frame = -3
Query: 308 PPREPGLDXSQGCDQPRAPGLDNSQGYDRLRAPGLDYSQGCDRLRAPGLDYSQG 147
P EPG + G P PG D G D APG G +R P D G
Sbjct: 445 PKGEPGYRGTPGQSIPGLPGKDGKPGLD--GAPGRKGENGLPGVRGPPGDSLNG 496
Score = 27.5 bits (58), Expect = 3.1
Identities = 19/54 (35%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Frame = -3
Query: 305 PREPGLDXSQGCDQPRAPGLDNSQGYDRLRAPGLDYSQGCDRL-RAPGLDYSQG 147
P +PG + P APGL G+ L PG G L APGL G
Sbjct: 1263 PGQPGQSIAGPVGPPGAPGLQGKDGFPGL--PGQKGESGLSGLPGAPGLKGESG 1314
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV)
collagen protein.
Length = 1795
Score = 29.1 bits (62), Expect = 1.0
Identities = 19/54 (35%), Positives = 21/54 (38%)
Frame = -3
Query: 308 PPREPGLDXSQGCDQPRAPGLDNSQGYDRLRAPGLDYSQGCDRLRAPGLDYSQG 147
P EPG + G P PG D G D APG G +R P D G
Sbjct: 481 PKGEPGYRGTPGQSIPGLPGKDGKPGLD--GAPGRKGENGLPGVRGPPGDSLNG 532
Score = 27.5 bits (58), Expect = 3.1
Identities = 19/54 (35%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Frame = -3
Query: 305 PREPGLDXSQGCDQPRAPGLDNSQGYDRLRAPGLDYSQGCDRL-RAPGLDYSQG 147
P +PG + P APGL G+ L PG G L APGL G
Sbjct: 1299 PGQPGQSIAGPVGPPGAPGLQGKDGFPGL--PGQKGESGLSGLPGAPGLKGESG 1350
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 29.1 bits (62), Expect = 1.0
Identities = 20/51 (39%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Frame = -3
Query: 308 PPREPGLDXSQGCDQPRAPGLDNSQGYD-RLRAPGLDYSQGCDRLRAPGLD 159
PP PG D S G QP PG G D + PG G D PG D
Sbjct: 259 PPGPPGQDGSGGAAQPGPPGPPGPPGNDGQPGGPGQPGGPGQD--GGPGTD 307
>AL117207-22|CAO82073.1| 505|Caenorhabditis elegans Hypothetical
protein Y60A3A.27 protein.
Length = 505
Score = 28.7 bits (61), Expect = 1.3
Identities = 17/65 (26%), Positives = 25/65 (38%), Gaps = 2/65 (3%)
Frame = +2
Query: 104 NPDYNPGQVHVVNYNPDYNPGQVHVVDHNPDYNPGQVHVVDHNPDYYPG--QVHVVDHNP 277
NP N + + NP ++ G NP +N G NP + G Q + + NP
Sbjct: 253 NPQRNQWNPQLNHGNPQFSYGNAQFNQGNPQFNQGNSQFNQWNPQFNQGNSQFNQWNSNP 312
Query: 278 DYXPG 292
G
Sbjct: 313 QSGRG 317
Score = 26.6 bits (56), Expect = 5.4
Identities = 14/67 (20%), Positives = 22/67 (32%)
Frame = +2
Query: 143 YNPDYNPGQVHVVDHNPDYNPGQVHVVDHNPDYYPGQVHVVDHNPDYXPGQVHVVDNSGV 322
+NP N + NP ++ G NP + G NP + G +
Sbjct: 252 WNPQRNQWNPQLNHGNPQFSYGNAQFNQGNPQFNQGNSQFNQWNPQFNQGNSQFNQWNSN 311
Query: 323 PSDGNSD 343
P G +
Sbjct: 312 PQSGRGN 318
>Z71262-8|CAA95812.1| 302|Caenorhabditis elegans Hypothetical
protein F22D6.10 protein.
Length = 302
Score = 28.3 bits (60), Expect = 1.8
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -3
Query: 305 PREPGLDXSQGCDQPRAPGLDNSQGYDRLRA-PG 207
P PG D ++G QP +PG S+G + R PG
Sbjct: 196 PGRPGRDGTRGVGQPGSPGQPGSRGPEGPRGQPG 229
Score = 25.8 bits (54), Expect = 9.5
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = -3
Query: 305 PREPGLDXSQGCD-QPRAPGLDNSQGYDRLRAPGLDYSQGCDRLRA-PG 165
P G D + G D P PG D ++G + +PG S+G + R PG
Sbjct: 181 PGNKGRDGNPGRDGSPGRPGRDGTRGVGQPGSPGQPGSRGPEGPRGQPG 229
>Z70307-11|CAA94337.1| 488|Caenorhabditis elegans Hypothetical
protein C39E9.10 protein.
Length = 488
Score = 28.3 bits (60), Expect = 1.8
Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = +3
Query: 225 IITLTIIQARCTWLITTLTXIQARFTWW-TIVVFHRTA 335
I+ T CTW T L + +WW V+ H TA
Sbjct: 219 ILLKTPTLVACTWGYTALVFVSGTLSWWEPTVIQHLTA 256
>Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical
protein K04H4.1b protein.
Length = 1502
Score = 27.9 bits (59), Expect = 2.4
Identities = 18/40 (45%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = -3
Query: 299 EPGLDXSQG-CDQPRAPGLDNSQGYDRLRAPGLDYSQGCD 183
EPGL G C P G D GYD PGLD G D
Sbjct: 436 EPGLPGEPGDCGYP---GEDGLPGYDIQGPPGLDGQSGRD 472
>Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical
protein K04H4.1a protein.
Length = 1759
Score = 27.9 bits (59), Expect = 2.4
Identities = 18/40 (45%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = -3
Query: 299 EPGLDXSQG-CDQPRAPGLDNSQGYDRLRAPGLDYSQGCD 183
EPGL G C P G D GYD PGLD G D
Sbjct: 436 EPGLPGEPGDCGYP---GEDGLPGYDIQGPPGLDGQSGRD 472
>X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV)
collagen protein.
Length = 1758
Score = 27.9 bits (59), Expect = 2.4
Identities = 18/40 (45%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = -3
Query: 299 EPGLDXSQG-CDQPRAPGLDNSQGYDRLRAPGLDYSQGCD 183
EPGL G C P G D GYD PGLD G D
Sbjct: 435 EPGLPGEPGDCGYP---GEDGLPGYDIQGPPGLDGQSGRD 471
>U70849-7|AAF99925.2| 332|Caenorhabditis elegans Collagen protein
111 protein.
Length = 332
Score = 27.5 bits (58), Expect = 3.1
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Frame = -3
Query: 338 YCRPMEHHYCPPREPGLDXSQGCD-QPRAPGLDNSQG 231
+C + + CPP PG G D +P PG G
Sbjct: 90 HCNCLSQNQCPPGPPGPPGPAGMDGKPGEPGASGPHG 126
>U42841-13|AAC48170.1| 682|Caenorhabditis elegans Hypothetical
protein T17H7.1 protein.
Length = 682
Score = 27.1 bits (57), Expect = 4.1
Identities = 17/61 (27%), Positives = 22/61 (36%)
Frame = +2
Query: 107 PDYNPGQVHVVNYNPDYNPGQVHVVDHNPDYNPGQVHVVDHNPDYYPGQVHVVDHNPDYX 286
PD+ PG+ PD+ P Q PG PD+ PG PD+
Sbjct: 408 PDFGPGRQGGRGQGPDFGP-QDDFSGRRGSGGPGGRGGRGQEPDFGPGGQGGRGQGPDFG 466
Query: 287 P 289
P
Sbjct: 467 P 467
>AF003142-1|AAB54189.2| 389|Caenorhabditis elegans Hypothetical
protein F57C9.6 protein.
Length = 389
Score = 27.1 bits (57), Expect = 4.1
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = -1
Query: 253 LAWIIVRVMIDYVHLAWIIVRVVIDYVHLAWIIVRVVIDYVHLAWIIIR--VMIDHVHSV 80
+ W V ++A+ I+ ++++ V A II+R H+ +III +ID + +
Sbjct: 37 MEWSTVGGRFGMAYIAFGILAILVNIVIFACIIIRRRTTSSHVFYIIILNFTIIDTIKGI 96
Query: 79 C 77
C
Sbjct: 97 C 97
>U00049-3|AAC47059.1| 339|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 7 protein.
Length = 339
Score = 26.6 bits (56), Expect = 5.4
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = -1
Query: 346 VVTIAVRWNTTIVHHVNLAWXIVRVVINHVHLAWIIVRVMIDYVHLAWIIVRV 188
++ I V WNT I + W VI H + W V + +HL +I V +
Sbjct: 161 ILPILVVWNTVISEKEVVFWYGGFFVIYHRRVGW----VSLSKLHLTFIFVSI 209
>AL117195-29|CAB55017.2| 204|Caenorhabditis elegans Hypothetical
protein Y57A10A.14 protein.
Length = 204
Score = 26.6 bits (56), Expect = 5.4
Identities = 12/38 (31%), Positives = 16/38 (42%)
Frame = +2
Query: 230 NPDYYPGQVHVVDHNPDYXPGQVHVVDNSGVPSDGNSD 343
N YY + V Y P V + DNS +P N +
Sbjct: 60 NTSYYGSIIRKVSAQVPYQPDYVRIEDNSTIPIFDNEE 97
>AF000263-19|AAG00021.1| 321|Caenorhabditis elegans Collagen
protein 56 protein.
Length = 321
Score = 26.6 bits (56), Expect = 5.4
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 266 QPRAPGLDNSQGYDRLRAPGLDYS 195
+P PGLD G+D L PG DY+
Sbjct: 106 RPGKPGLDGEPGFDGL--PGRDYN 127
>Z77132-3|CAB00860.1| 310|Caenorhabditis elegans Hypothetical
protein F54D1.3 protein.
Length = 310
Score = 26.2 bits (55), Expect = 7.2
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -3
Query: 305 PREPGLDXSQGCDQPRAPGLDNSQG 231
P +PG D +G P APG + G
Sbjct: 219 PGQPGADGQRGAGTPGAPGAPGNAG 243
>Z77132-2|CAB00858.1| 294|Caenorhabditis elegans Hypothetical
protein F54D1.2 protein.
Length = 294
Score = 26.2 bits (55), Expect = 7.2
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -3
Query: 305 PREPGLDXSQGCDQPRAPGLDNSQG 231
P +PG D +G P APG + G
Sbjct: 203 PGQPGADGQRGAGTPGAPGAPGNAG 227
>U50312-9|AAA92325.1| 294|Caenorhabditis elegans Collagen protein
10 protein.
Length = 294
Score = 26.2 bits (55), Expect = 7.2
Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = -3
Query: 305 PREPGLDXSQGCD-QPRAPGLDNSQGYDRLRAPGLDYSQG 189
P + G D + G D QP APG D +G PG + G
Sbjct: 188 PGDNGQDGAPGQDGQPGAPGQDGQRGSGAPGGPGAPGNAG 227
>U50312-7|AAA92323.2| 306|Caenorhabditis elegans Collagen protein
144 protein.
Length = 306
Score = 26.2 bits (55), Expect = 7.2
Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = -3
Query: 305 PREPGLDXSQGCD-QPRAPGLDNSQGYDRLRAPGLDYSQG 189
P + G D + G D QP APG D +G PG + G
Sbjct: 200 PGDNGQDGAPGQDGQPGAPGQDGQRGSGAPGGPGAPGNAG 239
>U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical
protein F31D5.4 protein.
Length = 989
Score = 26.2 bits (55), Expect = 7.2
Identities = 27/105 (25%), Positives = 42/105 (40%), Gaps = 2/105 (1%)
Frame = +3
Query: 39 SCFSSSPYWPWLPQTECTWSIITLIIIQAR--CT*SITTLTIIQARCT*SITTLTIIQAR 212
+C S+ P+W + P T T I +R T S T + T + TT T+I
Sbjct: 188 TCISNRPFWNYDPPTASTTEEIDTSSSTSRSTSTPSSTEASSTVTSTTTARTTTTMIPTT 247
Query: 213 CT*SIITLTIIQARCTWLITTLTXIQARFTWWTIVVFHRTAIVTT 347
T + I T + T ++T+ T T+V T T+
Sbjct: 248 PTTTTIAST---STVTSIVTSTTVTSTTVPTTTVVTTVPTTTATS 289
>AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-like
protein MTH-2 protein.
Length = 971
Score = 26.2 bits (55), Expect = 7.2
Identities = 27/105 (25%), Positives = 42/105 (40%), Gaps = 2/105 (1%)
Frame = +3
Query: 39 SCFSSSPYWPWLPQTECTWSIITLIIIQAR--CT*SITTLTIIQARCT*SITTLTIIQAR 212
+C S+ P+W + P T T I +R T S T + T + TT T+I
Sbjct: 170 TCISNRPFWNYDPPTASTTEEIDTSSSTSRSTSTPSSTEASSTVTSTTTARTTTTMIPTT 229
Query: 213 CT*SIITLTIIQARCTWLITTLTXIQARFTWWTIVVFHRTAIVTT 347
T + I T + T ++T+ T T+V T T+
Sbjct: 230 PTTTTIAST---STVTSIVTSTTVTSTTVPTTTVVTTVPTTTATS 271
>AF039046-10|AAB94220.2| 233|Caenorhabditis elegans Serpentine
receptor, class j protein23, isoform a protein.
Length = 233
Score = 26.2 bits (55), Expect = 7.2
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +3
Query: 240 IIQARCTWLITTLTXIQARFTWWTIVVFHRTAI 338
II RC+++ T + A FT+ +V+F A+
Sbjct: 91 IIAFRCSFIAATYAILHAHFTYRFMVLFKNKAL 123
>AF039046-9|AAX22285.1| 341|Caenorhabditis elegans Serpentine
receptor, class j protein23, isoform b protein.
Length = 341
Score = 26.2 bits (55), Expect = 7.2
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +3
Query: 240 IIQARCTWLITTLTXIQARFTWWTIVVFHRTAI 338
II RC+++ T + A FT+ +V+F A+
Sbjct: 91 IIAFRCSFIAATYAILHAHFTYRFMVLFKNKAL 123
>Z81594-1|CAB04745.1| 908|Caenorhabditis elegans Hypothetical
protein T20F10.1 protein.
Length = 908
Score = 25.8 bits (54), Expect = 9.5
Identities = 15/63 (23%), Positives = 23/63 (36%)
Frame = +2
Query: 83 RVHVVDHNPDYNPGQVHVVNYNPDYNPGQVHVVDHNPDYNPGQVHVVDHNPDYYPGQVHV 262
R+H + D H+ N P Y+PG D +P + D Y +H+
Sbjct: 185 RIHPAGYRYDMPTPAYHMNNNAPQYSPGYSRPPPPAYDSSPVNTRMTPVATDNYRTHLHM 244
Query: 263 VDH 271
H
Sbjct: 245 KVH 247
>Z70682-4|CAA94581.1| 299|Caenorhabditis elegans Hypothetical
protein F08G5.4 protein.
Length = 299
Score = 25.8 bits (54), Expect = 9.5
Identities = 16/46 (34%), Positives = 18/46 (39%)
Frame = -3
Query: 305 PREPGLDXSQGCDQPRAPGLDNSQGYDRLRAPGLDYSQGCDRLRAP 168
P PG D +G P APG QG PG D + G P
Sbjct: 195 PGAPGQDGQRGTGLPGAPGAPGPQGPS--GNPGQDGAAGAPGQAGP 238
>U50312-8|AAA92324.1| 294|Caenorhabditis elegans Collagen protein
145 protein.
Length = 294
Score = 25.8 bits (54), Expect = 9.5
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -3
Query: 305 PREPGLDXSQGCDQPRAPGLDNSQG 231
P +PG D +G P APG + G
Sbjct: 203 PGQPGADGQRGSGAPGAPGAPGNAG 227
>U41990-3|AAY44010.1| 291|Caenorhabditis elegans Hypothetical
protein F52B10.2 protein.
Length = 291
Score = 25.8 bits (54), Expect = 9.5
Identities = 10/37 (27%), Positives = 18/37 (48%)
Frame = -1
Query: 319 TTIVHHVNLAWXIVRVVINHVHLAWIIVRVMIDYVHL 209
TT VN W +R+ + H H+ + I+ +H+
Sbjct: 162 TTKTRGVNAGWGAIRIGVYHKHMKRWLDHFPIENIHI 198
>U40942-4|AAC47069.2| 486|Caenorhabditis elegans Hypothetical
protein K02E10.4a protein.
Length = 486
Score = 25.8 bits (54), Expect = 9.5
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = -3
Query: 311 CPPREPGLDXSQGCDQPRAPGLD 243
CP EP +D C P+ LD
Sbjct: 138 CPSNEPSIDNQPSCPYPKLTVLD 160
>U40942-3|AAU05564.1| 487|Caenorhabditis elegans Hypothetical
protein K02E10.4b protein.
Length = 487
Score = 25.8 bits (54), Expect = 9.5
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = -3
Query: 311 CPPREPGLDXSQGCDQPRAPGLD 243
CP EP +D C P+ LD
Sbjct: 139 CPSNEPSIDNQPSCPYPKLTVLD 161
>AL032642-3|CAA21654.1| 336|Caenorhabditis elegans Hypothetical
protein Y48A6C.4 protein.
Length = 336
Score = 25.8 bits (54), Expect = 9.5
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = -1
Query: 172 HLAWIIVRVVIDYVHLAWIIIRVMIDHVHSVCGSH 68
H+ + +V + HLA + V++D S+C +H
Sbjct: 149 HVLRALTNIVTEVRHLALSTLSVLLDRYPSLCRNH 183
>AF100306-10|AAC68926.1| 798|Caenorhabditis elegans Hypothetical
protein T24C4.7 protein.
Length = 798
Score = 25.8 bits (54), Expect = 9.5
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +2
Query: 227 HNPDYYPGQVHVVDHNPDYXPGQVHVV-DNSGVPSDGN 337
+N YY G + VD + Y P +VH +S PS+ N
Sbjct: 486 NNTQYYFGYIGEVDPSNPYYPFKVHYTSSDSPWPSERN 523
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,090,681
Number of Sequences: 27780
Number of extensions: 212996
Number of successful extensions: 707
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 515
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 660
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 514188384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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