Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_O19
         (367 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    24   0.65 
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    22   2.0  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    21   3.4  
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    21   6.0  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   6.0  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   6.0  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 23.8 bits (49), Expect = 0.65
 Identities = 12/48 (25%), Positives = 23/48 (47%)
 Frame = +2

Query: 119  PGQVHVVNYNPDYNPGQVHVVDHNPDYNPGQVHVVDHNPDYYPGQVHV 262
            P  V V++  P   P    ++ H     P + + +  +PD + GQ+H+
Sbjct: 868  PNLVEVLDEFPSVRPFAPLLLLHLTPLQP-RFYSISSSPDVHQGQIHL 914



 Score = 23.0 bits (47), Expect = 1.1
 Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
 Frame = +2

Query: 83   RVHVVDHNPDYNPGQVH----VVNYNPDYNPGQVH 175
            R + +  +PD + GQ+H    VV Y      G +H
Sbjct: 897  RFYSISSSPDVHQGQIHLTVAVVQYKTQDGFGPIH 931


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 22.2 bits (45), Expect = 2.0
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -1

Query: 151 RVVIDYVHLAWIIIRVMIDHVHSVC 77
           ++ ID     W++   +I++V SVC
Sbjct: 124 KIEIDMCDRLWVLDSGLINNVRSVC 148


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +3

Query: 51  SSPYWPWLPQTECTWSIITLIIIQA 125
           S+P W + P    TW  I ++++ A
Sbjct: 549 SAPVWRFQPWGPFTWGGIGVVVLFA 573


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +1

Query: 1   RQTTLTLFDNESFRVFLLRRIGHGCRKQSAR 93
           RQ    L  +ESFR    R     CRK+  +
Sbjct: 427 RQFLYCLAGDESFRKRRQREAAGNCRKRGEK 457


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 10/29 (34%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
 Frame = +3

Query: 54  SPYWPWLPQT--ECTWSIITLIIIQARCT 134
           +P +P LP +  +CTW+I +   I  +C+
Sbjct: 58  NPRYP-LPYSGSKCTWTITSYHRINLKCS 85


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +2

Query: 107 PDYNPGQVHVVNYNP 151
           P Y+P Q H   Y+P
Sbjct: 314 PSYHPHQHHPSQYHP 328


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,011
Number of Sequences: 438
Number of extensions: 2531
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8680350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)