Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_O19
(367 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g35800.1 68417.m05087 DNA-directed RNA polymerase II largest ... 31 0.31
At2g23260.1 68415.m02778 UDP-glucoronosyl/UDP-glucosyl transfera... 30 0.54
At5g18560.1 68418.m02194 AP2 domain-containing transcription fac... 29 0.95
At3g49050.1 68416.m05358 lipase class 3 family protein / calmodu... 29 0.95
At5g60440.1 68418.m07581 MADS-box protein (AGL62) contains Pfal ... 29 1.3
At2g46800.2 68415.m05840 zinc transporter (ZAT) identical to zin... 26 6.7
At2g46800.1 68415.m05839 zinc transporter (ZAT) identical to zin... 26 6.7
At5g57130.1 68418.m07135 expressed protein 26 8.8
At4g23390.1 68417.m03372 expressed protein contains Pfam profi... 26 8.8
>At4g35800.1 68417.m05087 DNA-directed RNA polymerase II largest
subunit (RPB205) (RPII) (RPB1) nearly identical to
P|P18616 DNA-directed RNA polymerase II largest subunit
(EC 2.7.7.6) {Arabidopsis thaliana}
Length = 1840
Score = 30.7 bits (66), Expect = 0.31
Identities = 15/59 (25%), Positives = 25/59 (42%)
Frame = +2
Query: 113 YNPGQVHVVNYNPDYNPGQVHVVDHNPDYNPGQVHVVDHNPDYYPGQVHVVDHNPDYXP 289
Y+P + +P Y+P + +P Y+P +P Y P + +PDY P
Sbjct: 1740 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP 1797
Score = 29.9 bits (64), Expect = 0.54
Identities = 15/62 (24%), Positives = 23/62 (37%)
Frame = +2
Query: 104 NPDYNPGQVHVVNYNPDYNPGQVHVVDHNPDYNPGQVHVVDHNPDYYPGQVHVVDHNPDY 283
+P Y+P +P Y+P +P Y+P +P Y P +P Y
Sbjct: 1577 SPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1636
Query: 284 XP 289
P
Sbjct: 1637 SP 1638
Score = 29.5 bits (63), Expect = 0.72
Identities = 15/62 (24%), Positives = 23/62 (37%)
Frame = +2
Query: 104 NPDYNPGQVHVVNYNPDYNPGQVHVVDHNPDYNPGQVHVVDHNPDYYPGQVHVVDHNPDY 283
+P Y+P +P Y+P +P Y+P +P Y P +P Y
Sbjct: 1661 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSY 1720
Query: 284 XP 289
P
Sbjct: 1721 GP 1722
Score = 29.1 bits (62), Expect = 0.95
Identities = 15/62 (24%), Positives = 23/62 (37%)
Frame = +2
Query: 104 NPDYNPGQVHVVNYNPDYNPGQVHVVDHNPDYNPGQVHVVDHNPDYYPGQVHVVDHNPDY 283
+P Y+P +P Y+P +P Y+P +P Y P +P Y
Sbjct: 1563 SPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1622
Query: 284 XP 289
P
Sbjct: 1623 SP 1624
Score = 29.1 bits (62), Expect = 0.95
Identities = 15/62 (24%), Positives = 23/62 (37%)
Frame = +2
Query: 104 NPDYNPGQVHVVNYNPDYNPGQVHVVDHNPDYNPGQVHVVDHNPDYYPGQVHVVDHNPDY 283
+P Y+P +P Y+P +P Y+P +P Y P +P Y
Sbjct: 1570 SPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1629
Query: 284 XP 289
P
Sbjct: 1630 SP 1631
Score = 29.1 bits (62), Expect = 0.95
Identities = 15/62 (24%), Positives = 23/62 (37%)
Frame = +2
Query: 104 NPDYNPGQVHVVNYNPDYNPGQVHVVDHNPDYNPGQVHVVDHNPDYYPGQVHVVDHNPDY 283
+P Y+P +P Y+P +P Y+P +P Y P +P Y
Sbjct: 1584 SPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAY 1643
Query: 284 XP 289
P
Sbjct: 1644 SP 1645
Score = 29.1 bits (62), Expect = 0.95
Identities = 15/62 (24%), Positives = 23/62 (37%)
Frame = +2
Query: 104 NPDYNPGQVHVVNYNPDYNPGQVHVVDHNPDYNPGQVHVVDHNPDYYPGQVHVVDHNPDY 283
+P Y+P +P Y+P +P Y+P +P Y P +P Y
Sbjct: 1605 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSY 1664
Query: 284 XP 289
P
Sbjct: 1665 SP 1666
Score = 29.1 bits (62), Expect = 0.95
Identities = 15/62 (24%), Positives = 23/62 (37%)
Frame = +2
Query: 104 NPDYNPGQVHVVNYNPDYNPGQVHVVDHNPDYNPGQVHVVDHNPDYYPGQVHVVDHNPDY 283
+P Y+P +P Y+P +P Y+P +P Y P +P Y
Sbjct: 1619 SPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSY 1678
Query: 284 XP 289
P
Sbjct: 1679 SP 1680
Score = 29.1 bits (62), Expect = 0.95
Identities = 15/62 (24%), Positives = 23/62 (37%)
Frame = +2
Query: 104 NPDYNPGQVHVVNYNPDYNPGQVHVVDHNPDYNPGQVHVVDHNPDYYPGQVHVVDHNPDY 283
+P Y+P +P Y+P +P Y+P +P Y P +P Y
Sbjct: 1633 SPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1692
Query: 284 XP 289
P
Sbjct: 1693 SP 1694
Score = 28.7 bits (61), Expect = 1.3
Identities = 15/62 (24%), Positives = 23/62 (37%)
Frame = +2
Query: 104 NPDYNPGQVHVVNYNPDYNPGQVHVVDHNPDYNPGQVHVVDHNPDYYPGQVHVVDHNPDY 283
+P Y+P +P Y+P +P Y+P +P Y P +P Y
Sbjct: 1542 SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSY 1601
Query: 284 XP 289
P
Sbjct: 1602 SP 1603
Score = 28.7 bits (61), Expect = 1.3
Identities = 15/62 (24%), Positives = 23/62 (37%)
Frame = +2
Query: 104 NPDYNPGQVHVVNYNPDYNPGQVHVVDHNPDYNPGQVHVVDHNPDYYPGQVHVVDHNPDY 283
+P Y+P +P Y+P +P Y+P +P Y P +P Y
Sbjct: 1556 SPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSY 1615
Query: 284 XP 289
P
Sbjct: 1616 SP 1617
Score = 28.7 bits (61), Expect = 1.3
Identities = 15/62 (24%), Positives = 23/62 (37%)
Frame = +2
Query: 104 NPDYNPGQVHVVNYNPDYNPGQVHVVDHNPDYNPGQVHVVDHNPDYYPGQVHVVDHNPDY 283
+P Y+P +P Y+P +P Y+P +P Y P +P Y
Sbjct: 1591 SPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAY 1650
Query: 284 XP 289
P
Sbjct: 1651 SP 1652
Score = 28.7 bits (61), Expect = 1.3
Identities = 15/62 (24%), Positives = 23/62 (37%)
Frame = +2
Query: 104 NPDYNPGQVHVVNYNPDYNPGQVHVVDHNPDYNPGQVHVVDHNPDYYPGQVHVVDHNPDY 283
+P Y+P +P Y+P +P Y+P +P Y P +P Y
Sbjct: 1598 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAY 1657
Query: 284 XP 289
P
Sbjct: 1658 SP 1659
Score = 28.7 bits (61), Expect = 1.3
Identities = 15/62 (24%), Positives = 23/62 (37%)
Frame = +2
Query: 104 NPDYNPGQVHVVNYNPDYNPGQVHVVDHNPDYNPGQVHVVDHNPDYYPGQVHVVDHNPDY 283
+P Y+P +P Y+P +P Y+P +P Y P +P Y
Sbjct: 1612 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSY 1671
Query: 284 XP 289
P
Sbjct: 1672 SP 1673
Score = 28.7 bits (61), Expect = 1.3
Identities = 15/62 (24%), Positives = 23/62 (37%)
Frame = +2
Query: 104 NPDYNPGQVHVVNYNPDYNPGQVHVVDHNPDYNPGQVHVVDHNPDYYPGQVHVVDHNPDY 283
+P Y+P +P Y+P +P Y+P +P Y P +P Y
Sbjct: 1626 SPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1685
Query: 284 XP 289
P
Sbjct: 1686 SP 1687
Score = 28.7 bits (61), Expect = 1.3
Identities = 15/62 (24%), Positives = 23/62 (37%)
Frame = +2
Query: 104 NPDYNPGQVHVVNYNPDYNPGQVHVVDHNPDYNPGQVHVVDHNPDYYPGQVHVVDHNPDY 283
+P Y+P +P Y+P +P Y+P +P Y P +P Y
Sbjct: 1647 SPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGY 1706
Query: 284 XP 289
P
Sbjct: 1707 SP 1708
Score = 28.7 bits (61), Expect = 1.3
Identities = 15/62 (24%), Positives = 23/62 (37%)
Frame = +2
Query: 104 NPDYNPGQVHVVNYNPDYNPGQVHVVDHNPDYNPGQVHVVDHNPDYYPGQVHVVDHNPDY 283
+P Y+P +P Y+P +P Y+P +P Y P +P Y
Sbjct: 1654 SPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSY 1713
Query: 284 XP 289
P
Sbjct: 1714 SP 1715
Score = 28.7 bits (61), Expect = 1.3
Identities = 15/62 (24%), Positives = 23/62 (37%)
Frame = +2
Query: 104 NPDYNPGQVHVVNYNPDYNPGQVHVVDHNPDYNPGQVHVVDHNPDYYPGQVHVVDHNPDY 283
+P Y+P +P Y+P +P Y+P +P Y P +P Y
Sbjct: 1668 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYGPTSPSY 1727
Query: 284 XP 289
P
Sbjct: 1728 NP 1729
Score = 28.3 bits (60), Expect = 1.7
Identities = 15/62 (24%), Positives = 23/62 (37%)
Frame = +2
Query: 104 NPDYNPGQVHVVNYNPDYNPGQVHVVDHNPDYNPGQVHVVDHNPDYYPGQVHVVDHNPDY 283
+P Y+P +P Y+P +P Y+P +P Y P +P Y
Sbjct: 1549 SPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSY 1608
Query: 284 XP 289
P
Sbjct: 1609 SP 1610
Score = 27.9 bits (59), Expect = 2.2
Identities = 15/62 (24%), Positives = 23/62 (37%)
Frame = +2
Query: 104 NPDYNPGQVHVVNYNPDYNPGQVHVVDHNPDYNPGQVHVVDHNPDYYPGQVHVVDHNPDY 283
+P Y+P +P Y+P +P Y+P +P Y P +P Y
Sbjct: 1640 SPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAY 1699
Query: 284 XP 289
P
Sbjct: 1700 SP 1701
Score = 27.1 bits (57), Expect = 3.8
Identities = 15/71 (21%), Positives = 25/71 (35%)
Frame = +2
Query: 104 NPDYNPGQVHVVNYNPDYNPGQVHVVDHNPDYNPGQVHVVDHNPDYYPGQVHVVDHNPDY 283
+P Y+P +P Y+P +P Y+P +P Y P + Y
Sbjct: 1675 SPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKY 1734
Query: 284 XPGQVHVVDNS 316
P + N+
Sbjct: 1735 SPSIAYSPSNA 1745
Score = 26.2 bits (55), Expect = 6.7
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +2
Query: 104 NPDYNPGQVHVVNYNPDYNPGQVHVVDHNPDYNP 205
+P Y+P +P Y+P + +PDY+P
Sbjct: 1764 SPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP 1797
>At2g23260.1 68415.m02778 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 456
Score = 29.9 bits (64), Expect = 0.54
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 12 SDTIRQ*KLSCFSSSPYWPWLPQTECTWSIITLII-IQA 125
S I + + SC SSP+ PW+P + +I I+ IQA
Sbjct: 96 SKIIEEKRYSCIISSPFTPWVPAVAASHNISCAILWIQA 134
>At5g18560.1 68418.m02194 AP2 domain-containing transcription
factor, putative AP2/EREBP-like transcription factor
LEAFY PETIOLE, Arabidopsis thaliana, EMBL:AF216581
Length = 348
Score = 29.1 bits (62), Expect = 0.95
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +2
Query: 155 YNPGQVHVVDHNPDYNPGQVHVVDHNPDYYPGQ--VHVVDHNPDY 283
Y P VH + NP+ + V ++N + P V+DH+P Y
Sbjct: 112 YTPTDVHTILTNPNLHSLIVSPYNNNQSFLPNSSPQFVIDHHPHY 156
Score = 28.7 bits (61), Expect = 1.3
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +2
Query: 113 YNPGQVHVVNYNPDYNPGQVHVVDHNPDY--NPGQVHVVDHNPDY 241
Y P VH + NP+ + V ++N + N V+DH+P Y
Sbjct: 112 YTPTDVHTILTNPNLHSLIVSPYNNNQSFLPNSSPQFVIDHHPHY 156
>At3g49050.1 68416.m05358 lipase class 3 family protein /
calmodulin-binding heat-shock protein, putative
calmodulin-binding heat-shock protein, Nicotiana
tabacum, PIR:T04107
Length = 477
Score = 29.1 bits (62), Expect = 0.95
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +2
Query: 203 PGQVHVVDHNPDYYPGQV-HVVDHNPDYXPGQVHVVDNSGVPSDGNSDHVVIA 358
P Q + D Y PG++ H+V+ P G+ V + VP DG +H+V++
Sbjct: 272 PEQKMLKDPRRLYAPGRMYHIVERKPCRL-GRYPPVVKTAVPVDGRFEHIVLS 323
>At5g60440.1 68418.m07581 MADS-box protein (AGL62) contains Pfal
profile PF00319: SRF-type transcription factor
(DNA-binding and dimerisation domain)
Length = 299
Score = 28.7 bits (61), Expect = 1.3
Identities = 18/61 (29%), Positives = 26/61 (42%)
Frame = +2
Query: 107 PDYNPGQVHVVNYNPDYNPGQVHVVDHNPDYNPGQVHVVDHNPDYYPGQVHVVDHNPDYX 286
P+YN VN+ P+YNP Q N N QV + N + + +H+ Y
Sbjct: 244 PEYN------VNFRPEYNPNQ------NQIQNQNQVQIQIQNQSFKRENISEYEHHHGYP 291
Query: 287 P 289
P
Sbjct: 292 P 292
Score = 26.2 bits (55), Expect = 6.7
Identities = 14/51 (27%), Positives = 22/51 (43%)
Frame = +2
Query: 95 VDHNPDYNPGQVHVVNYNPDYNPGQVHVVDHNPDYNPGQVHVVDHNPDYYP 247
V+ P+YNP Q + N N QV + N + + +H+ Y P
Sbjct: 248 VNFRPEYNPNQNQIQNQN------QVQIQIQNQSFKRENISEYEHHHGYPP 292
>At2g46800.2 68415.m05840 zinc transporter (ZAT) identical to zinc
transporter ZAT [Arabidopsis thaliana]
gi|4206640|gb|AAD11757; member of the cation diffusion
facilitator (CDF) family, or cation efflux (CE) family,
PMID:11500563
Length = 398
Score = 26.2 bits (55), Expect = 6.7
Identities = 15/77 (19%), Positives = 34/77 (44%)
Frame = -1
Query: 259 VHLAWIIVRVMIDYVHLAWIIVRVVIDYVHLAWIIVRVVIDYVHLAWIIIRVMIDHVHSV 80
+ L W++ +++ I+R+V + + ++ +V + + II+ V++ H H
Sbjct: 132 IQLIWLLTGILVYEA-----IIRIVTETSEVNGFLMFLVAAFGLVVNIIMAVLLGHDHGH 186
Query: 79 CGSHGQYGEEEKHESFH 29
HG + H H
Sbjct: 187 SHGHGHGHGHDHHNHSH 203
>At2g46800.1 68415.m05839 zinc transporter (ZAT) identical to zinc
transporter ZAT [Arabidopsis thaliana]
gi|4206640|gb|AAD11757; member of the cation diffusion
facilitator (CDF) family, or cation efflux (CE) family,
PMID:11500563
Length = 398
Score = 26.2 bits (55), Expect = 6.7
Identities = 15/77 (19%), Positives = 34/77 (44%)
Frame = -1
Query: 259 VHLAWIIVRVMIDYVHLAWIIVRVVIDYVHLAWIIVRVVIDYVHLAWIIIRVMIDHVHSV 80
+ L W++ +++ I+R+V + + ++ +V + + II+ V++ H H
Sbjct: 132 IQLIWLLTGILVYEA-----IIRIVTETSEVNGFLMFLVAAFGLVVNIIMAVLLGHDHGH 186
Query: 79 CGSHGQYGEEEKHESFH 29
HG + H H
Sbjct: 187 SHGHGHGHGHDHHNHSH 203
>At5g57130.1 68418.m07135 expressed protein
Length = 920
Score = 25.8 bits (54), Expect = 8.8
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 104 NPDYNPGQVHVVNYNPDYNP 163
NP++ Q H +N +PD NP
Sbjct: 133 NPNFPLWQTHFLNQSPDQNP 152
>At4g23390.1 68417.m03372 expressed protein contains Pfam profile
PF03080: Arabidopsis proteins of unknown function
Length = 401
Score = 25.8 bits (54), Expect = 8.8
Identities = 12/45 (26%), Positives = 19/45 (42%)
Frame = +2
Query: 161 PGQVHVVDHNPDYNPGQVHVVDHNPDYYPGQVHVVDHNPDYXPGQ 295
PGQV D D + + D+Y + ++ NP+ P Q
Sbjct: 142 PGQVSAKDKKIDLTGHHFATISYKDDHYGAKGNINVWNPNVSPDQ 186
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,501,461
Number of Sequences: 28952
Number of extensions: 182798
Number of successful extensions: 480
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 358
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 472
length of database: 12,070,560
effective HSP length: 73
effective length of database: 9,957,064
effective search space used: 477939072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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