Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_O18
(455 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1655 + 38940790-38940864,38941245-38942057,38942149-389422... 30 0.77
04_04_0962 + 29728983-29729034,29729622-29731369,29731656-297317... 29 1.8
04_01_0121 + 1253201-1253584 29 1.8
04_01_0113 + 1188285-1188420,1189245-1189795 27 5.4
12_02_0228 + 15903452-15903812,15904153-15904202,15904615-159047... 27 7.2
11_03_0212 - 11761856-11762037,11762302-11762398,11763571-117645... 27 7.2
09_06_0059 - 20584196-20584288,20584389-20585055,20585411-205857... 27 7.2
08_02_1508 + 27602104-27602265,27602398-27602449,27603357-276047... 27 7.2
07_03_1115 - 24076506-24076677,24077169-24077266,24077622-240777... 27 7.2
07_03_1391 + 26234647-26235026,26235112-26235226,26235345-262354... 27 9.5
04_04_0042 + 22328464-22329858 27 9.5
01_05_0128 + 18413029-18413318,18413946-18414139,18414447-18414553 27 9.5
>01_06_1655 +
38940790-38940864,38941245-38942057,38942149-38942268,
38942883-38943566
Length = 563
Score = 30.3 bits (65), Expect = 0.77
Identities = 15/54 (27%), Positives = 22/54 (40%)
Frame = +2
Query: 266 FKIPNQAPTTTKKPTMTVSAPSAVPTVNTNGNRGRYDTDPDDINSVFKIPTQAP 427
++I P T P S P+ P V+ + R D D D V +P +P
Sbjct: 101 YQITPAKPATVTAPAAAASLPAPPPPVSARERQRRRDVDDDKPAIVLPLPPPSP 154
>04_04_0962 +
29728983-29729034,29729622-29731369,29731656-29731742,
29732035-29732199,29732437-29732526,29732863-29733027,
29733124-29733418,29733550-29733764,29733879-29733947,
29734107-29734184,29734466-29734529,29734658-29734897,
29734985-29735124
Length = 1135
Score = 29.1 bits (62), Expect = 1.8
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +2
Query: 218 AQANANDIDLEEINSIFKIPNQAPTTTK--KPTM 313
++A AN I +E I K+P++APT T+ KP M
Sbjct: 892 SRAEANMISVERILQYTKLPSEAPTITEGSKPPM 925
>04_01_0121 + 1253201-1253584
Length = 127
Score = 29.1 bits (62), Expect = 1.8
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +2
Query: 290 TTTKKPTMTVSAPS-AVPTVNTNGNRGRYDTDPDDINSVFKIPTQAPGTVNPVTIP 454
TT K+ ++ PS A+P + T R T+ D +N+V+K Q P V P
Sbjct: 33 TTVKESIADLNLPSIAIPNLRTFQAMTRSVTNVDQVNAVYKAFLQPPTGVEMAVDP 88
>04_01_0113 + 1188285-1188420,1189245-1189795
Length = 228
Score = 27.5 bits (58), Expect = 5.4
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +2
Query: 293 TTKKPTMT-VSAPS-AVPTVNTNGNRGRYDTDPDDINSVFKIPTQAPGTVNPVTIP 454
TT K ++T ++ PS A+P + T R T+ +N+V+K QAP V P
Sbjct: 112 TTAKGSLTDLNLPSIAIPNLRTFQAMTRTVTNVGQVNAVYKAFFQAPAGVEMAVEP 167
>12_02_0228 + 15903452-15903812,15904153-15904202,15904615-15904713,
15907146-15907415,15908045-15908125,15909033-15909599,
15909677-15910053,15910326-15911613
Length = 1030
Score = 27.1 bits (57), Expect = 7.2
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +2
Query: 272 IPNQAPTTTKKPTMTVSAPSAVPTVNTNGNRGRYDTDPDDIN--SVFKIPTQAPGTVNPV 445
IPN +PTT T + + + T NG + D +P + S F +P+ +P T
Sbjct: 917 IPNASPTTPLFGTPSPTVGLSTGTDQMNGGQMAGDKNPFAFSAASPFGLPSSSPSTPTLF 976
Query: 446 TIP 454
+ P
Sbjct: 977 STP 979
>11_03_0212 -
11761856-11762037,11762302-11762398,11763571-11764545,
11766172-11766263,11766450-11766510
Length = 468
Score = 27.1 bits (57), Expect = 7.2
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = +2
Query: 335 VPTVNTNGNRGRYDTDP-DDINSVFKIPTQAPGT 433
+PT N +G + T P D + F IP P T
Sbjct: 137 IPTANNEQQKGNFITTPKDKVAKSFDIPNNFPNT 170
>09_06_0059 -
20584196-20584288,20584389-20585055,20585411-20585732,
20585862-20586000,20586261-20586322,20586371-20586434,
20586674-20586826,20586952-20587082,20587175-20587336,
20588060-20588264
Length = 665
Score = 27.1 bits (57), Expect = 7.2
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +2
Query: 179 RILAILVLVGSAHA-QANANDIDLEEINSIFKIPNQAPTTTKKPTMTVSAPSAVP 340
R + + G A A +A IDLE N K P+Q T +P + V P VP
Sbjct: 417 RTASSTINAGDAQACSTSATHIDLENKNGDSKTPSQDKRETNQPPIRV-VPFPVP 470
>08_02_1508 +
27602104-27602265,27602398-27602449,27603357-27604757,
27604833-27606140,27606594-27607435
Length = 1254
Score = 27.1 bits (57), Expect = 7.2
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 278 NQAPTTTKKPTMTVSAPSAVPTV 346
++APTT K+P+ T PS P +
Sbjct: 314 SRAPTTQKQPSSTFFTPSTTPKI 336
Score = 26.6 bits (56), Expect = 9.5
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +2
Query: 275 PNQAPTTTKK--PTMTVSAPSAVPTVNTNGNRGRYDTDPDDINSVFKIPTQAP 427
P PT++++ PT +V++P+ VP T+ R D + ++P+QAP
Sbjct: 933 PTGMPTSSRRQEPTPSVTSPTGVP---TSPRRQEPTPDTQRRRAADQMPSQAP 982
>07_03_1115 -
24076506-24076677,24077169-24077266,24077622-24077743,
24079059-24079235,24079809-24079897,24079919-24079965,
24080423-24080519,24080600-24080682,24080716-24080796,
24081043-24081199,24081323-24081750,24081985-24082014,
24083180-24083300,24083432-24083697
Length = 655
Score = 27.1 bits (57), Expect = 7.2
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Frame = +1
Query: 211 CSRPGKRQ*YRPRRNKQH---FQNTESSTNNY*ETNHDC*CPISCSDCKYQR 357
C + G Q P + H FQ SST + + N DC C S C Y+R
Sbjct: 122 CEQCGNHQSESPNIIEAHDPRFQPDLSSTYSPVKCNVDCTCDNERSQCTYER 173
>07_03_1391 +
26234647-26235026,26235112-26235226,26235345-26235410,
26235519-26235607,26235717-26235807,26235917-26236063,
26236160-26236252,26236373-26236474,26236581-26237255
Length = 585
Score = 26.6 bits (56), Expect = 9.5
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +2
Query: 224 ANANDIDLEEINSIFKIPN-QAPTTTKKPTMTVSAPSAVPTVN 349
A+A D EE+NS + N Q P T+ PT +S+ T+N
Sbjct: 384 ADAADNTEEEMNSSEQTVNCQTPEATETPTEEISSQHIQETIN 426
>04_04_0042 + 22328464-22329858
Length = 464
Score = 26.6 bits (56), Expect = 9.5
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 287 PTTTKKPTMTVSAPSAVPTVNTN 355
PTTT T T +AP+ PT + N
Sbjct: 298 PTTTTTATATATAPAPAPTPSPN 320
>01_05_0128 + 18413029-18413318,18413946-18414139,18414447-18414553
Length = 196
Score = 26.6 bits (56), Expect = 9.5
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +2
Query: 284 APTTTKKPTMTVSAPSAVPTVNTNGNRGR 370
A T MTVS SA +V GNRGR
Sbjct: 12 AVPTAASTAMTVSVASAGGSVGRGGNRGR 40
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,794,288
Number of Sequences: 37544
Number of extensions: 192782
Number of successful extensions: 584
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 568
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 583
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 895500300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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