Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_O17
(543 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0155 - 15185985-15186755,15187049-15187236,15187479-151875... 38 0.004
05_07_0357 - 29533496-29533556,29533638-29533770,29533857-295339... 36 0.021
11_06_0176 + 20929629-20929791,20929918-20930333,20930449-209307... 32 0.26
06_02_0136 + 12195422-12195435,12196047-12196122,12196896-121977... 32 0.26
03_04_0187 - 18236041-18236643 32 0.26
12_02_0884 - 23986393-23987486,23988213-23988314,23988561-239886... 31 0.79
11_03_0110 + 10106214-10106327,10106404-10106493,10106598-101067... 30 1.4
09_01_0106 + 1673737-1674522,1674625-1675089 29 2.4
01_01_0210 - 1801335-1802138 29 2.4
03_06_0116 + 31773295-31773603,31773800-31773946,31774080-317741... 29 3.2
08_02_1617 - 28265252-28265354,28266546-28266608,28266943-28267151 28 4.2
07_03_1151 + 24385272-24386543 28 4.2
04_04_0239 - 23843235-23843243,23843334-23844047,23844138-238442... 28 4.2
02_05_1277 - 35408097-35409080 28 4.2
08_02_1060 + 24007980-24008662,24010078-24010219,24010293-240115... 28 5.5
12_01_0241 - 1807379-1807418,1807579-1807625,1807800-1807892,180... 27 7.3
11_01_0244 - 1877497-1877536,1877697-1877743,1877917-1878009,187... 27 7.3
07_01_0223 - 1642553-1643676,1643725-1644541 27 7.3
05_07_0106 + 27723877-27723978,27724825-27725100,27726103-27727281 27 7.3
05_01_0160 + 1081416-1081647,1081840-1082012,1082169-1082246,108... 27 7.3
09_04_0218 - 15755688-15756095 27 9.7
07_03_0080 + 13193001-13193312 27 9.7
04_04_1694 - 35419278-35419565,35419744-35419861,35420404-354204... 27 9.7
04_04_0157 + 23165638-23166633 27 9.7
03_02_0567 - 9495290-9495796 27 9.7
02_05_0201 + 26687369-26689228 27 9.7
>09_04_0155 -
15185985-15186755,15187049-15187236,15187479-15187517,
15187741-15187768
Length = 341
Score = 38.3 bits (85), Expect = 0.004
Identities = 27/100 (27%), Positives = 42/100 (42%), Gaps = 8/100 (8%)
Frame = +3
Query: 246 CNNCDKLFTDISSLEFHMRIFHPQAQIA-----DSNITSTNTEDADGGSYRCRHCDRVYY 410
C C FT S L+ H+++ Q + S+ TS +E Y C+ C
Sbjct: 220 CRVCQAKFTCQSDLQSHLKVMKHQLNLRAPSSDGSSFTSATSESLSLELYSCKVCSVKCT 279
Query: 411 SDRSLKHHIK-LKHTTDEAME--CCYCGKICNN*YYLASH 521
+R L +H+ KH E ++ C C CN+ L+ H
Sbjct: 280 FERMLAYHLTGKKHLKQENLQLSCEICKLQCNSEKVLSDH 319
>05_07_0357 -
29533496-29533556,29533638-29533770,29533857-29533953,
29534073-29534141,29534221-29534378,29534483-29534527,
29534598-29534625
Length = 196
Score = 35.9 bits (79), Expect = 0.021
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = +3
Query: 294 HMRIFHPQAQIADSNITSTNTEDAD---GGSYRCRHCDRVYYSDRSLKHHIKLKH 449
H+ HP Q + + + + E + GGS C+ C + + S+ +L+ H K KH
Sbjct: 139 HVATPHPAKQASKTPVNDKSKEKSPKSGGGSISCKSCSKTFNSEMALQSHSKAKH 193
>11_06_0176 +
20929629-20929791,20929918-20930333,20930449-20930736,
20931034-20931147,20931245-20931352,20931701-20931744,
20933106-20933200,20934103-20934182,20934278-20934391,
20934476-20934628,20934740-20934832
Length = 555
Score = 32.3 bits (70), Expect = 0.26
Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = +3
Query: 159 CNVCFDRFYSRDTILEHKKTCLPPDNVNT-CNNCDKLFTDISSLEFHMRIFHPQ 317
C +CF YS + K N T CN C+ F S LEFH R +H Q
Sbjct: 508 CVICFFERYSTIAMASGK-------NAGTKCNLCNARFLKDSDLEFHRRYYHQQ 554
>06_02_0136 +
12195422-12195435,12196047-12196122,12196896-12197707,
12197941-12198010,12199469-12199557,12199633-12199666
Length = 364
Score = 32.3 bits (70), Expect = 0.26
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = +3
Query: 111 KNHMRVNHDKEYSMSTCNVCFDRFYSRDTILEHKKTCLPPDNVNTCNNC 257
KNH R+ K C+VC DR S+ T E K L + C +C
Sbjct: 196 KNHKRLESLKRSQEIECSVCLDRVLSKPTAAERKFGLLSECDHPFCISC 244
>03_04_0187 - 18236041-18236643
Length = 200
Score = 32.3 bits (70), Expect = 0.26
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +3
Query: 279 SSLEFHMRIFHPQAQIADSNITSTNTEDADGGSYRCRHCDRVYYSDRSLKHH 434
++L H+ P D+ +ST T + GG +RC C R + + ++L H
Sbjct: 76 AALPMHVIDAPPPPSAEDTASSSTTTTTSGGGRHRCSVCHRTFATGQALGGH 127
>12_02_0884 -
23986393-23987486,23988213-23988314,23988561-23988642,
23989231-23989368
Length = 471
Score = 30.7 bits (66), Expect = 0.79
Identities = 22/81 (27%), Positives = 32/81 (39%), Gaps = 3/81 (3%)
Frame = +3
Query: 66 CCEYCSYSFTNVYELKNHMRVNH---DKEYSMSTCNVCFDRFYSRDTILEHKKTCLPPDN 236
CC C SF + L HM + ++ S S+ D + + LPP+
Sbjct: 119 CCNKCDKSFRSGNALGGHMSCHRSVGNQPKSTSSPPTVVDLHMPLLSSCDDNLLLLPPET 178
Query: 237 VNTCNNCDKLFTDISSLEFHM 299
C C K+F+ SL HM
Sbjct: 179 --QCQMCSKVFSTSGSLREHM 197
>11_03_0110 +
10106214-10106327,10106404-10106493,10106598-10106795,
10106909-10107064,10107271-10107321,10107415-10107555,
10107643-10108014
Length = 373
Score = 29.9 bits (64), Expect = 1.4
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +3
Query: 285 LEFHMRIFH--PQAQIADSNITSTNTEDADGGSYRCRHCDRVYYSDRSLKHHIKLKHTT 455
L H+ IF P + D+N+ + ADG ++ C + S SL+H + + HTT
Sbjct: 12 LLLHLLIFSVDPTKEEVDNNLIIKTIQTADGQTFACVS----FKSQPSLRHPLLMNHTT 66
>09_01_0106 + 1673737-1674522,1674625-1675089
Length = 416
Score = 29.1 bits (62), Expect = 2.4
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 372 GSYRCRHCDRVYYSDRSLKHHIKLKHTTDE 461
G Y CR C ++ S ++L H+K H +DE
Sbjct: 307 GPYECRKCGTMFSSGQALGWHMK-SHNSDE 335
>01_01_0210 - 1801335-1802138
Length = 267
Score = 29.1 bits (62), Expect = 2.4
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +3
Query: 327 ADSNITSTNTEDADGGSYRCRHCDRVYYSDRSLKHH 434
+ + T+T T DG Y C++C R + + ++L H
Sbjct: 53 SSTTTTTTATAGGDGRRYECQYCCREFANSQALGGH 88
>03_06_0116 +
31773295-31773603,31773800-31773946,31774080-31774158,
31777558-31778180
Length = 385
Score = 28.7 bits (61), Expect = 3.2
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +3
Query: 324 IADSNITSTNTEDADGGSYRCRHCDRVYYSDRSLKHHIKLKH 449
IADSN T + + + + C + + SD+ LKH + +K+
Sbjct: 177 IADSNCEGTGSSEEEQDT-SCPEAEEIDPSDKQLKHQLLMKY 217
>08_02_1617 - 28265252-28265354,28266546-28266608,28266943-28267151
Length = 124
Score = 28.3 bits (60), Expect = 4.2
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +3
Query: 357 EDADG-GSYRCRHCDRVYYSDRSLKHHIKLK 446
ED G G + C HCDR + S+ + H + K
Sbjct: 56 EDLPGMGQFYCLHCDRYFASESVKEEHYRSK 86
>07_03_1151 + 24385272-24386543
Length = 423
Score = 28.3 bits (60), Expect = 4.2
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +3
Query: 357 EDADGGSYR-CRHCDRVYYSDRSLKHHIK 440
E DGG R CR C +++ S RSL H++
Sbjct: 82 EGGDGGELRACRECGKLFSSWRSLFGHMR 110
>04_04_0239 -
23843235-23843243,23843334-23844047,23844138-23844287,
23844389-23844601,23844697-23844811,23844919-23846300,
23847217-23847279
Length = 881
Score = 28.3 bits (60), Expect = 4.2
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 393 CDRVYYSDRSLKHHIKLKHTTDEAMECCYCG 485
C+R Y D S KH +HT ++C CG
Sbjct: 439 CNRCPYRDLSDKHESMAQHTLHRWIQCDGCG 469
>02_05_1277 - 35408097-35409080
Length = 327
Score = 28.3 bits (60), Expect = 4.2
Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 4/45 (8%)
Frame = +3
Query: 144 YSMSTCNVCFDRFYS-RDTILEHKKTCLP---PDNVNTCNNCDKL 266
Y TCN CF F + HKK LP DNVN N + +
Sbjct: 117 YECKTCNKCFPTFQALGGHRASHKKPRLPGADDDNVNNVTNTNAI 161
>08_02_1060 +
24007980-24008662,24010078-24010219,24010293-24011537,
24012453-24013040
Length = 885
Score = 27.9 bits (59), Expect = 5.5
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +3
Query: 312 PQAQIADSNITSTNTE-DADG-GSYRCRHCDRVYYSDRSLKHHIKLKH 449
P A I S+ + E DAD SY C+ C+ ++ + HH+ H
Sbjct: 294 PVASITFSSHSRDQDETDADDINSYECQQCNLTFHGQSAYAHHLITFH 341
>12_01_0241 -
1807379-1807418,1807579-1807625,1807800-1807892,
1808167-1808267,1808368-1808440,1808684-1808845,
1809003-1809034,1809399-1809471,1809713-1809768,
1809871-1810105
Length = 303
Score = 27.5 bits (58), Expect = 7.3
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -2
Query: 422 RSIAIVNSVAMTASV*TTICIFSIRRGYIGISYLSLGMEYP 300
RS + NSVA + + TT+ I + + G +Y +G P
Sbjct: 130 RSEVVGNSVAFSLGLATTLAILGVAASFAGKAYGQVGQGLP 170
>11_01_0244 -
1877497-1877536,1877697-1877743,1877917-1878009,
1878284-1878384,1878485-1878557,1878801-1878962,
1879123-1879154,1879257-1879342,1879457-1879584,
1879827-1879882,1879985-1880219
Length = 350
Score = 27.5 bits (58), Expect = 7.3
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -2
Query: 422 RSIAIVNSVAMTASV*TTICIFSIRRGYIGISYLSLGMEYP 300
RS + NSVA + + TT+ I + + G +Y +G P
Sbjct: 177 RSEVVGNSVAFSLGLATTLAILGVAASFAGKAYGQVGQGLP 217
>07_01_0223 - 1642553-1643676,1643725-1644541
Length = 646
Score = 27.5 bits (58), Expect = 7.3
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -3
Query: 313 GWNILM*NSKLDISVNNLSQLLQVLTLSGGRHVFLCSK 200
GW+ M + I + L +L V LS G +FLC +
Sbjct: 252 GWSFGMNSPAPSIDIAKLPRLAVVFLLSAGTTIFLCMR 289
>05_07_0106 + 27723877-27723978,27724825-27725100,27726103-27727281
Length = 518
Score = 27.5 bits (58), Expect = 7.3
Identities = 25/111 (22%), Positives = 43/111 (38%), Gaps = 2/111 (1%)
Frame = +3
Query: 135 DKEYSMSTCNVCFDRFYSRDTILEHKKTCLPPDNVNTCNNCDKLFTDISSLEFHMRIFHP 314
D S N+ YSR+ I E ++C+ N N D + +S LE + +
Sbjct: 38 DNRLLRSLVNIHEQETYSREIITEAIESCMKKQADNLVNTLDVISGRLSQLELY--CYKL 95
Query: 315 QAQIADSNITSTNTEDADGGSYRC--RHCDRVYYSDRSLKHHIKLKHTTDE 461
+ I + + ++RC +H V S + L+ +L T E
Sbjct: 96 ERSIGELRSDVMDYHGEANINFRCLEKHVKEVQNSVQVLQDKQELAETQKE 146
>05_01_0160 +
1081416-1081647,1081840-1082012,1082169-1082246,
1082372-1082529,1082558-1082709,1083232-1083290,
1083633-1083912,1084235-1084470,1084601-1084744,
1084845-1085012
Length = 559
Score = 27.5 bits (58), Expect = 7.3
Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
Frame = +3
Query: 42 ESKKNVFFCCEYCSYSFTNVYELKNHMRVNHDKEYSMSTC--NVCFDRFYSRDTILEHKK 215
ESKK E C +F +L+ H + +YS C C F + + + H K
Sbjct: 348 ESKKEFICPEENCGKTFKYASKLQKHEESHVKLDYSEVICCEPGCMKAFTNLECLKAHNK 407
Query: 216 TC 221
+C
Sbjct: 408 SC 409
>09_04_0218 - 15755688-15756095
Length = 135
Score = 27.1 bits (57), Expect = 9.7
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +3
Query: 372 GSYRCRHCDRVYYSDRSLKHH 434
G + C +CDR +YS ++L H
Sbjct: 29 GFFLCMYCDRKFYSSQALGGH 49
>07_03_0080 + 13193001-13193312
Length = 103
Score = 27.1 bits (57), Expect = 9.7
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +3
Query: 60 FFCCEYCSYSFTNVYELKNHMRVNHDKEYS 149
++ C +C FTN L HM + H K+ S
Sbjct: 16 YYECTFCKRGFTNAQALGGHMNI-HRKDRS 44
>04_04_1694 - 35419278-35419565,35419744-35419861,35420404-35420490,
35420909-35420931,35421647-35421843,35421964-35422159,
35422382-35422481,35423288-35423374,35424053-35424282,
35424678-35424763,35425148-35425271,35425415-35428573,
35430014-35430019
Length = 1566
Score = 27.1 bits (57), Expect = 9.7
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 4/64 (6%)
Frame = +3
Query: 42 ESKKNVFFCCEYCSYSFTNVYELKNHMRVNH--DKEYSMS--TCNVCFDRFYSRDTILEH 209
+ + N++FC YC F L NH+ + + D E S S CN + +S I H
Sbjct: 1111 DKQSNIWFCGRYCKEIFIG---LHNHVGIENFLDNELSWSILKCNTDGQKLHSSKKI-AH 1166
Query: 210 KKTC 221
C
Sbjct: 1167 MTEC 1170
>04_04_0157 + 23165638-23166633
Length = 331
Score = 27.1 bits (57), Expect = 9.7
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 159 CNVCFDRFYSRDTILEH 209
C VC RF +RDT+L H
Sbjct: 106 CRVCGRRFRARDTLLRH 122
>03_02_0567 - 9495290-9495796
Length = 168
Score = 27.1 bits (57), Expect = 9.7
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +3
Query: 225 PPDNVNTCNNCDKLFTDISSLEFHMRIFHPQAQIADSN 338
PP+ + C C++ F +L H R H + ++AD +
Sbjct: 23 PPERMFECKTCNRQFPSFQALGGH-RASHKKPRLADGD 59
>02_05_0201 + 26687369-26689228
Length = 619
Score = 27.1 bits (57), Expect = 9.7
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +3
Query: 228 PDNVNTCNNCDKLFTDISSLEFHMR 302
P N TC NC K FT +L H R
Sbjct: 114 PRNCRTCENCGKEFTSWKTLLDHGR 138
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,039,750
Number of Sequences: 37544
Number of extensions: 282230
Number of successful extensions: 838
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 836
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1210221432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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