Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_O17
         (543 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    57   4e-10
CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein...    31   0.019
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    29   0.13 
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    29   0.13 
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    24   2.8  
DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide...    24   3.7  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    23   8.6  

>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 56.8 bits (131), Expect = 4e-10
 Identities = 45/172 (26%), Positives = 73/172 (42%), Gaps = 13/172 (7%)
 Frame = +3

Query: 63  FCCEYCSYSFTNVYELKNHMRVN-HDKEYSMSTCNVCFDRFYSRDTILEHKKTCLPPDN- 236
           F C +C+Y+  + ++L  HMR++  +K YS   C+VCF RF   +++  HK      +  
Sbjct: 240 FQCPHCTYASPDKFKLTRHMRIHTGEKPYS---CDVCFARFTQSNSLKAHKMIHQVGNKP 296

Query: 237 VNTCNNCDKLFTDISSLEFHMRIFHP-----QAQIADSNIT-----STNTEDADGGS-YR 383
           V  C  C       + L  H++  H      + +  DS          + +  +G   YR
Sbjct: 297 VFQCKLCPTTCGRKTDLRIHVQNLHTADKPIKCKRCDSTFPDRYSYKMHAKTHEGEKCYR 356

Query: 384 CRHCDRVYYSDRSLKHHIKLKHTTDEAMECCYCGKICNN*YYLASHGKIVHN 539
           C +C     S R L+ H+ L HT  +  +C  C +       L  H    HN
Sbjct: 357 CEYCPYASISMRHLESHL-LLHTDQKPYKCDQCAQTFRQKQLLKRHMNYYHN 407



 Score = 47.6 bits (108), Expect = 3e-07
 Identities = 36/156 (23%), Positives = 61/156 (39%)
 Frame = +3

Query: 63  FCCEYCSYSFTNVYELKNHMRVNHDKEYSMSTCNVCFDRFYSRDTILEHKKTCLPPDNVN 242
           + C YC+Y+   ++ L  H++ +   E     C VC   F +  ++  H  T       +
Sbjct: 127 YMCNYCNYTSNKLFLLSRHLKTH--SEDRPHKCVVCERGFKTLASLQNHVNT-HTGTKPH 183

Query: 243 TCNNCDKLFTDISSLEFHMRIFHPQAQIADSNITSTNTEDADGGSYRCRHCDRVYYSDRS 422
            C +CD  FT    L  H+R  H   +                  ++C  CD        
Sbjct: 184 RCKHCDNCFTTSGELIRHIRYRHTHER-----------------PHKCTECDYASVELSK 226

Query: 423 LKHHIKLKHTTDEAMECCYCGKICNN*YYLASHGKI 530
           LK HI+  HT ++  +C +C     + + L  H +I
Sbjct: 227 LKRHIR-THTGEKPFQCPHCTYASPDKFKLTRHMRI 261



 Score = 46.8 bits (106), Expect = 5e-07
 Identities = 31/142 (21%), Positives = 51/142 (35%), Gaps = 10/142 (7%)
 Frame = +3

Query: 63  FCCEYCSYSFTNVYELKNHMRVNHDKEYSMSTCNVCFDRFYSRDTILEHKKTCLPPDNVN 242
           + C+ C   FT    LK H  ++      +  C +C      +  +  H +     D   
Sbjct: 268 YSCDVCFARFTQSNSLKAHKMIHQVGNKPVFQCKLCPTTCGRKTDLRIHVQNLHTADKPI 327

Query: 243 TCNNCDKLFTDISSLEFHMRI----------FHPQAQIADSNITSTNTEDADGGSYRCRH 392
            C  CD  F D  S + H +           + P A I+  ++ S      D   Y+C  
Sbjct: 328 KCKRCDSTFPDRYSYKMHAKTHEGEKCYRCEYCPYASISMRHLESHLLLHTDQKPYKCDQ 387

Query: 393 CDRVYYSDRSLKHHIKLKHTTD 458
           C + +   + LK H+   H  D
Sbjct: 388 CAQTFRQKQLLKRHMNYYHNPD 409



 Score = 40.7 bits (91), Expect = 3e-05
 Identities = 38/165 (23%), Positives = 60/165 (36%), Gaps = 12/165 (7%)
 Frame = +3

Query: 69  CEYCSYSFTNVYELKNHMRVNHDKEYSMSTCNVCFDRFYSRDTILEHKKTCLPPDNVNTC 248
           C++C   FT   EL  H+R  H  E     C  C         +  H +T    +    C
Sbjct: 185 CKHCDNCFTTSGELIRHIRYRHTHERPHK-CTECDYASVELSKLKRHIRTHTG-EKPFQC 242

Query: 249 NNCDKLFTDISSLEFHMRIFHPQ----AQIADSNITSTNTEDAD------GGS--YRCRH 392
            +C     D   L  HMRI   +      +  +  T +N+  A       G    ++C+ 
Sbjct: 243 PHCTYASPDKFKLTRHMRIHTGEKPYSCDVCFARFTQSNSLKAHKMIHQVGNKPVFQCKL 302

Query: 393 CDRVYYSDRSLKHHIKLKHTTDEAMECCYCGKICNN*YYLASHGK 527
           C         L+ H++  HT D+ ++C  C     + Y    H K
Sbjct: 303 CPTTCGRKTDLRIHVQNLHTADKPIKCKRCDSTFPDRYSYKMHAK 347



 Score = 28.7 bits (61), Expect = 0.13
 Identities = 12/43 (27%), Positives = 20/43 (46%)
 Frame = +3

Query: 354 TEDADGGSYRCRHCDRVYYSDRSLKHHIKLKHTTDEAMECCYC 482
           T+ + G +Y C +C+        L  H+K  H+ D   +C  C
Sbjct: 119 TQQSTGSTYMCNYCNYTSNKLFLLSRHLK-THSEDRPHKCVVC 160


>CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein
           protein.
          Length = 415

 Score = 31.5 bits (68), Expect = 0.019
 Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
 Frame = +3

Query: 159 CNVCFDRFYSRDTILEHKKTCLPPDNVN---TCNNCDKLFTDISSLEFHMRIFHPQAQIA 329
           CN+C   + ++    +H+       N N    C  C KLF+     + HMR  HP+  ++
Sbjct: 351 CNLCDMSYRTKLQYQKHEYEVHRISNENFGIKCTICHKLFSQRQDYQLHMRAIHPKPGVS 410


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 28.7 bits (61), Expect = 0.13
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +3

Query: 69  CEYCSYSFTNVYELKNHMRVNH 134
           C YC  S++ +  L++H+R+ H
Sbjct: 553 CPYCPASYSRIDTLRSHLRIKH 574



 Score = 22.6 bits (46), Expect = 8.6
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = +3

Query: 384 CRHCDRVYYSDRSLKHHIKLKH 449
           C +C   Y    +L+ H+++KH
Sbjct: 553 CPYCPASYSRIDTLRSHLRIKH 574


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 28.7 bits (61), Expect = 0.13
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +3

Query: 69  CEYCSYSFTNVYELKNHMRVNH 134
           C YC  S++ +  L++H+R+ H
Sbjct: 529 CPYCPASYSRIDTLRSHLRIKH 550



 Score = 22.6 bits (46), Expect = 8.6
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = +3

Query: 384 CRHCDRVYYSDRSLKHHIKLKH 449
           C +C   Y    +L+ H+++KH
Sbjct: 529 CPYCPASYSRIDTLRSHLRIKH 550


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = +3

Query: 372 GSYRCRHCDRVYYSDRSLKHHIKLKH 449
           G + C  C   Y    +L+ H K KH
Sbjct: 522 GRFECPLCRATYTRSDNLRTHCKFKH 547


>DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide F
           receptor protein.
          Length = 575

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 9/22 (40%), Positives = 17/22 (77%)
 Frame = +1

Query: 211 RKRVCRLIMSTLAITAINYLPI 276
           +KR  R+++S +AI  I++LP+
Sbjct: 318 KKRTNRMLISMVAIFGISWLPL 339


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +3

Query: 18  RSLLKQMSESKKNVFF 65
           RSLLK   ESK+  FF
Sbjct: 233 RSLLKDSDESKQYTFF 248


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 571,026
Number of Sequences: 2352
Number of extensions: 12444
Number of successful extensions: 43
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50040333
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)