Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_O17
(543 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g26590.1 68414.m03239 zinc finger (C2H2 type) family protein ... 35 0.031
At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein ... 32 0.22
At5g03740.1 68418.m00335 zinc finger (C2H2 type) family protein ... 32 0.28
At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein ... 31 0.66
At3g53600.1 68416.m05920 zinc finger (C2H2 type) family protein ... 30 0.87
At5g61470.1 68418.m07713 zinc finger (C2H2 type) family protein ... 30 1.1
At1g65200.1 68414.m07392 ubiquitin carboxyl-terminal hydrolase-r... 30 1.1
At1g65110.1 68414.m07381 ubiquitin carboxyl-terminal hydrolase-r... 30 1.1
At5g40310.1 68418.m04890 exonuclease family protein contains exo... 29 1.5
At3g27970.1 68416.m03491 exonuclease family protein contains exo... 29 1.5
At1g55110.1 68414.m06294 zinc finger (C2H2 type) family protein ... 29 1.5
At1g02030.1 68414.m00123 zinc finger (C2H2 type) family protein ... 29 2.0
At5g61940.1 68418.m07775 ubiquitin carboxyl-terminal hydrolase-r... 29 2.7
At4g12240.1 68417.m01941 zinc finger (C2H2 type) family protein ... 29 2.7
At2g19260.1 68415.m02248 ELM2 domain-containing protein / PHD fi... 29 2.7
At1g16420.1 68414.m01964 latex-abundant protein, putative (AMC8)... 29 2.7
At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein ... 28 3.5
At1g69150.1 68414.m07911 DC1 domain-containing protein contains ... 28 3.5
At3g53820.1 68416.m05946 zinc finger (C2H2 type) family protein ... 28 4.6
At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein ... 28 4.6
At2g47090.1 68415.m05882 zinc finger (C2H2 type) family protein ... 28 4.6
At2g36930.1 68415.m04529 zinc finger (C2H2 type) family protein ... 28 4.6
At5g25160.1 68418.m02983 zinc finger (C2H2 type) family protein ... 27 6.1
At3g11385.1 68416.m01386 DC1 domain-containing protein contains ... 27 6.1
At5g57520.1 68418.m07187 zinc finger (C2H2 type) family protein ... 27 8.1
At3g10470.1 68416.m01255 zinc finger (C2H2 type) family protein ... 27 8.1
At2g45120.1 68415.m05615 zinc finger (C2H2 type) family protein ... 27 8.1
At2g17180.1 68415.m01984 zinc finger (C2H2 type) family protein ... 27 8.1
At1g44160.1 68414.m05100 DNAJ chaperone C-terminal domain-contai... 27 8.1
>At1g26590.1 68414.m03239 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 361
Score = 35.1 bits (77), Expect = 0.031
Identities = 29/119 (24%), Positives = 46/119 (38%), Gaps = 1/119 (0%)
Frame = +3
Query: 36 MSESKKNVFFCCEYCSYSFTNVYELKNHMRVNHDKEYSMSTCNVCFDRFYSRDTILEHKK 215
M E K+N F C +YC +F + L H+R+ H E S+ R + ++ K
Sbjct: 1 MEEGKENSFLC-KYCYKTFPSGKALGGHIRI-HTNENSVGYNGNKKKRLVDQRKMMAQKH 58
Query: 216 TCLPPDNVNTCNNCDKLFTDISSLEFHMRIF-HPQAQIADSNITSTNTEDADGGSYRCR 389
V C C ++F + +L HM + + D N S + R R
Sbjct: 59 K--QQQQVG-CRECGRVFVSLKALRGHMACHGEVKKMLMDDNSQSDTESETSSAPMRKR 114
Score = 27.5 bits (58), Expect = 6.1
Identities = 10/37 (27%), Positives = 23/37 (62%)
Frame = +3
Query: 357 EDADGGSYRCRHCDRVYYSDRSLKHHIKLKHTTDEAM 467
E+ S+ C++C + + S ++L HI++ HT + ++
Sbjct: 2 EEGKENSFLCKYCYKTFPSGKALGGHIRI-HTNENSV 37
>At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein
contains Pfam PF00096: Zinc finger, C2H2 type
Length = 387
Score = 32.3 bits (70), Expect = 0.22
Identities = 24/103 (23%), Positives = 38/103 (36%), Gaps = 5/103 (4%)
Frame = +3
Query: 21 SLLKQMSESKKNVFFCCEY--CSYSFTNVYELKNHMRVNHDKEYSMSTCNVCFDRFYSRD 194
+L M + + C Y C + + Y+LKNH+ H+K T
Sbjct: 154 NLRSHMKTHSQENYHICPYSGCVKRYAHEYKLKNHVAAYHEKNGGGETPKYTPPAEKVLR 213
Query: 195 TILEHKKTCLP-PDNVNTC--NNCDKLFTDISSLEFHMRIFHP 314
T+ C P D C C+K + L+ H++ HP
Sbjct: 214 TVKTPATVCGPSSDRPYACPYEGCEKAYIHEYKLKLHLKREHP 256
Score = 29.1 bits (62), Expect = 2.0
Identities = 31/144 (21%), Positives = 55/144 (38%), Gaps = 18/144 (12%)
Frame = +3
Query: 72 EYCSYSFTNVYELKNHMRVNHDKEYSMSTCNVCFDRFYSRDTILEHKKTCLPPDNVNTC- 248
E C F + +LK H ++ + + T C F + H KT +N + C
Sbjct: 113 EGCGKKFLDSSKLKRHYLIHTGERNYICTYEGCGKAFSLDFNLRSHMKT-HSQENYHICP 171
Query: 249 -NNCDKLFTDISSLEFHMRIFH------------PQAQ--IADSNITSTNTEDADGGSYR 383
+ C K + L+ H+ +H P A+ + +T + Y
Sbjct: 172 YSGCVKRYAHEYKLKNHVAAYHEKNGGGETPKYTPPAEKVLRTVKTPATVCGPSSDRPYA 231
Query: 384 CRH--CDRVYYSDRSLKHHIKLKH 449
C + C++ Y + LK H+K +H
Sbjct: 232 CPYEGCEKAYIHEYKLKLHLKREH 255
>At5g03740.1 68418.m00335 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 287
Score = 31.9 bits (69), Expect = 0.28
Identities = 22/93 (23%), Positives = 38/93 (40%), Gaps = 12/93 (12%)
Frame = +3
Query: 210 KKTCLPPDNVNTCNNCDKLF-----TDISSLEFHMRIFHPQAQIADSNITSTNTEDA--- 365
K++ P + N +N F TD H+ HP Q ++ + E +
Sbjct: 192 KRSAEPNSSKNPASNKKAKFVTPQKTDSKKPHVHVATPHPSKQAGKNSGGGSTGETSKQQ 251
Query: 366 ----DGGSYRCRHCDRVYYSDRSLKHHIKLKHT 452
G++ C+ C R + S+ L+ H K KH+
Sbjct: 252 QTPKSAGAFGCKSCTRTFTSEMGLQSHTKAKHS 284
>At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 500
Score = 30.7 bits (66), Expect = 0.66
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = +3
Query: 69 CEYCSYSFTNVYELKNHMRVNHDKEYSMSTCNVCFDRFYSRDTILEHKKTC 221
CE CS + + K H ++ KEY C F R RD+ + H+ C
Sbjct: 139 CEKCSKKYAVQSDWKAHSKICGTKEYKCD-CGTLFSR---RDSFITHRAFC 185
>At3g53600.1 68416.m05920 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 175
Score = 30.3 bits (65), Expect = 0.87
Identities = 17/75 (22%), Positives = 32/75 (42%)
Frame = +3
Query: 246 CNNCDKLFTDISSLEFHMRIFHPQAQIADSNITSTNTEDADGGSYRCRHCDRVYYSDRSL 425
C C++ F +L H I D ++ D ++C CD+++ + ++L
Sbjct: 51 CKTCNRKFDSFQALGGHRASHKKPKLIVDQEQVKHRNKEND--MHKCTICDQMFGTGQAL 108
Query: 426 KHHIKLKHTTDEAME 470
H++ KH T E
Sbjct: 109 GGHMR-KHRTSMITE 122
Score = 29.9 bits (64), Expect = 1.1
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 12/85 (14%)
Frame = +3
Query: 123 RVNHDKEYSMSTCNVCFDRFYS-RDTILEHKKTCLPPD-----------NVNTCNNCDKL 266
+ NH+ + TCN FD F + HKK L D +++ C CD++
Sbjct: 42 KTNHNNHFECKTCNRKFDSFQALGGHRASHKKPKLIVDQEQVKHRNKENDMHKCTICDQM 101
Query: 267 FTDISSLEFHMRIFHPQAQIADSNI 341
F +L HMR H + I + +I
Sbjct: 102 FGTGQALGGHMR-KHRTSMITEQSI 125
>At5g61470.1 68418.m07713 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 304
Score = 29.9 bits (64), Expect = 1.1
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = +3
Query: 243 TCNNCDKLFTDISSLEFHMRIFHPQAQIADSNITSTNTEDADGG----SYRCRHCDRVYY 410
TC+ C K+ +L H R H ++ I+ N DG Y C+ C+R++
Sbjct: 229 TCDTCGKVLRSYQALGGH-RTSHKYKRL---KISDKNYFGEDGPIVRRQYECQICNRMFA 284
Query: 411 SDRSLKHHIKLKH 449
S ++L H K+ +
Sbjct: 285 SGQALGGHKKIHY 297
>At1g65200.1 68414.m07392 ubiquitin carboxyl-terminal
hydrolase-related contains Pfam profiles PF00443:
Ubiquitin carboxyl-terminal hydrolase, PF04780: Protein
of unknown function (DUF629), PF04781: Protein of
unknown function (DUF627)
Length = 1101
Score = 29.9 bits (64), Expect = 1.1
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +3
Query: 42 ESKKNVFFCCEYCSYSFTNVYELKNHMRVNH 134
E K F+ C CS FT+ E KNH+ H
Sbjct: 228 EEGKWRFWMCRSCSNKFTSAEECKNHLDQEH 258
>At1g65110.1 68414.m07381 ubiquitin carboxyl-terminal
hydrolase-related contains Pfam profiles PF00443:
Ubiquitin carboxyl-terminal hydrolase, PF04780: Protein
of unknown function (DUF629), PF04781: Protein of
unknown function (DUF627)
Length = 1094
Score = 29.9 bits (64), Expect = 1.1
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3
Query: 45 SKKNVFFCCEYCSYSFTNVYELKNHMRVNHDKEY 146
++K F+ C CS +F + KNH+ HD +Y
Sbjct: 198 NRKWKFWMCRTCSQTFFYPKKFKNHLEQVHDAKY 231
>At5g40310.1 68418.m04890 exonuclease family protein contains
exonuclease domain, Pfam:PF00929
Length = 348
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/47 (25%), Positives = 22/47 (46%)
Frame = +3
Query: 159 CNVCFDRFYSRDTILEHKKTCLPPDNVNTCNNCDKLFTDISSLEFHM 299
C C+ +F ++ ++EH + + TC C+K SL H+
Sbjct: 8 CGGCYRQFNKKEHLVEHMRISYHSVHEPTCGICNKHCRSFDSLREHL 54
>At3g27970.1 68416.m03491 exonuclease family protein contains
exonuclease domain, Pfam:PF00929
Length = 354
Score = 29.5 bits (63), Expect = 1.5
Identities = 13/47 (27%), Positives = 20/47 (42%)
Frame = +3
Query: 159 CNVCFDRFYSRDTILEHKKTCLPPDNVNTCNNCDKLFTDISSLEFHM 299
C C+ +F + ++EH K + TC C K SL H+
Sbjct: 17 CAACYRQFNKLEHLVEHMKISYHSGHEPTCGVCKKHCRSFESLREHL 63
>At1g55110.1 68414.m06294 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 455
Score = 29.5 bits (63), Expect = 1.5
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = +3
Query: 69 CEYCSYSFTNVYELKNHMRVNHDKEYSMSTCNVCFDRFYSRDTILEHKKTC 221
CE CS + + K H + KEY C F R RD+ + H+ C
Sbjct: 171 CEKCSKKYAVQSDWKAHAKTCGTKEYKCD-CGTLFSR---RDSFITHRAFC 217
>At1g02030.1 68414.m00123 zinc finger (C2H2 type) family protein
identical to C2H2 zinc finger protein ZAT1 [Arabidopsis
thaliana] gi|1418321|emb|CAA67227; contains Pfam domain,
PF00096: Zinc finger, C2H2 type
Length = 267
Score = 29.1 bits (62), Expect = 2.0
Identities = 24/87 (27%), Positives = 40/87 (45%)
Frame = +3
Query: 42 ESKKNVFFCCEYCSYSFTNVYELKNHMRVNHDKEYSMSTCNVCFDRFYSRDTILEHKKTC 221
+ K+N +F CE C F + L H R +H K+ + + D+ S + + KK+
Sbjct: 153 KKKRNKWFECETCEKVFKSYQALGGH-RASHKKKIAET------DQLGSDELKKKKKKS- 204
Query: 222 LPPDNVNTCNNCDKLFTDISSLEFHMR 302
+ + C C K+FT +L H R
Sbjct: 205 --TSSHHECPICAKVFTSGQALGGHKR 229
>At5g61940.1 68418.m07775 ubiquitin carboxyl-terminal
hydrolase-related contains Pfam profiles PF00443:
Ubiquitin carboxyl-terminal hydrolase, PF04780: Protein
of unknown function (DUF629), PF04781: Protein of
unknown function (DUF627)
Length = 1094
Score = 28.7 bits (61), Expect = 2.7
Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +3
Query: 24 LLKQMSESKKNVFFCCE-YCSYSFTNVYELKNHMRVNHDKEYSMST 158
+L E ++ F+ C CS F++ E KNH+ H ++ S+
Sbjct: 239 VLTSAKEDREWKFWICRTLCSRKFSSAEECKNHLEQQHAADFKPSS 284
>At4g12240.1 68417.m01941 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 364
Score = 28.7 bits (61), Expect = 2.7
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 378 YRCRHCDRVYYSDRSLKHHIKLKHTTD 458
Y C CDR +Y++ L +H K H T+
Sbjct: 117 YFCGVCDRRFYTNEKLINHFKQIHETE 143
>At2g19260.1 68415.m02248 ELM2 domain-containing protein / PHD
finger family protein contains Pfam profiles: PF01448
ELM2 domain, PF00628 PHD-finger
Length = 631
Score = 28.7 bits (61), Expect = 2.7
Identities = 14/62 (22%), Positives = 31/62 (50%)
Frame = +3
Query: 216 TCLPPDNVNTCNNCDKLFTDISSLEFHMRIFHPQAQIADSNITSTNTEDADGGSYRCRHC 395
TC ++C++ K ++++S R +DS ++ T+T+ + +C+HC
Sbjct: 359 TCSSDGTNDSCSSL-KSSSEVNSTSSKSR--EDDCYSSDSGVSETDTDGSSSPFRQCKHC 415
Query: 396 DR 401
D+
Sbjct: 416 DK 417
>At1g16420.1 68414.m01964 latex-abundant protein, putative (AMC8) /
caspase family protein similar to latex-abundant protein
[Hevea brasiliensis] gb:AAD13216; contains Pfam profile
PF00656: ICE-like protease (caspase) p20 domain
Length = 381
Score = 28.7 bits (61), Expect = 2.7
Identities = 21/100 (21%), Positives = 38/100 (38%), Gaps = 2/100 (2%)
Frame = +3
Query: 144 YSMSTCNVCFDRFYSRDTIL--EHKKTCLPPDNVNTCNNCDKLFTDISSLEFHMRIFHPQ 317
+ M C + F ++D ++ + K+C+ P N C+ D L S +F +FH
Sbjct: 27 HRMQKCLIELYGFANKDIVIMIDTDKSCIQPTGKNICDELDNLIASGQSGDF--LVFHYS 84
Query: 318 AQIADSNITSTNTEDADGGSYRCRHCDRVYYSDRSLKHHI 437
++ED G CD D+ + +
Sbjct: 85 GHGTRIPPGIEDSEDPTGFDECITPCDMNLIKDQQFREMV 124
>At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 516
Score = 28.3 bits (60), Expect = 3.5
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = +3
Query: 69 CEYCSYSFTNVYELKNHMRVNHDKEYSMSTCNVCFDRFYSRDTILEHKKTC 221
CE CS + + K H + KEY C F R RD+ + H+ C
Sbjct: 161 CEKCSKRYAVQSDWKAHSKTCGTKEYRCD-CGTIFSR---RDSYITHRAFC 207
>At1g69150.1 68414.m07911 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 517
Score = 28.3 bits (60), Expect = 3.5
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +3
Query: 345 STNTEDADGGSYRCRHCDRVYYSDRSLKHHIKLKH 449
+T +D+DG SY+C CD ++ + KH ++ H
Sbjct: 112 ATCGKDSDGYSYKCHECDLKFHVNCE-KHPAEVTH 145
>At3g53820.1 68416.m05946 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 142
Score = 27.9 bits (59), Expect = 4.6
Identities = 9/35 (25%), Positives = 16/35 (45%)
Frame = +3
Query: 63 FCCEYCSYSFTNVYELKNHMRVNHDKEYSMSTCNV 167
+ CE+C F+N L HM ++ + N+
Sbjct: 21 YICEFCERGFSNAQALGGHMNIHRKDRAKLRQANL 55
>At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 650
Score = 27.9 bits (59), Expect = 4.6
Identities = 18/79 (22%), Positives = 31/79 (39%), Gaps = 9/79 (11%)
Frame = +3
Query: 246 CNNCDKLFTDISSLEFHMRIFHP-QAQIADSNITST--------NTEDADGGSYRCRHCD 398
C C K F +L H RI P + +++ + ++ Y C+ C
Sbjct: 45 CKICGKSFECYQALGGHQRIHRPIKEKLSKQEFSEVYPRKSKLQKRPESSSSCYECKVCG 104
Query: 399 RVYYSDRSLKHHIKLKHTT 455
+++ R L H KL +T
Sbjct: 105 KIFGCYRGLGGHTKLHRST 123
>At2g47090.1 68415.m05882 zinc finger (C2H2 type) family protein
contains Prosite PS00028: Zinc finger, C2H2 type, domain
Length = 745
Score = 27.9 bits (59), Expect = 4.6
Identities = 35/138 (25%), Positives = 55/138 (39%), Gaps = 17/138 (12%)
Frame = +3
Query: 93 TNVY--ELKNHMRVNHDKEYSMSTCNVCFDRFYSRDT----------ILEHKKTCLPPDN 236
TNVY +L ++ R+ K +CN+C D +R +EH K L +
Sbjct: 90 TNVYFDDLNHYTRI---KAMCRLSCNLCNDTNKTRPKKEPNHCVRFKSVEHLKDHLNHQH 146
Query: 237 -VNTCNNC---DKLFTDISSLEFHMRIFHPQAQIADSNITSTNTEDAD-GGSYRCRHCDR 401
++ C+ C K+F L F + DS + + +E G C C R
Sbjct: 147 KLHMCSLCLVGRKVFICEQKL-FTKGQLNQHISSGDSEVDGSESERGGFTGHPMCEFCKR 205
Query: 402 VYYSDRSLKHHIKLKHTT 455
+Y D L H+ +H T
Sbjct: 206 PFYGDNELYTHMSREHYT 223
>At2g36930.1 68415.m04529 zinc finger (C2H2 type) family protein
contains Prosite PS00028: Zinc finger, C2H2 type,
domain; weak similarity to Zinc finger protein T86
(Swiss-Prot:O00488) [Homo sapiens]
Length = 198
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = +3
Query: 357 EDADG-GSYRCRHCDRVYYSDRSLK-HHIKLK 446
ED G G + C HCDR Y+S+ S++ H K K
Sbjct: 50 EDLPGMGQFYCLHCDR-YFSNVSVRDDHFKTK 80
>At5g25160.1 68418.m02983 zinc finger (C2H2 type) family protein
(ZFP3) identical to zinc finger protein, ZFP3
gi|790677|gb|AAA87299; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 235
Score = 27.5 bits (58), Expect = 6.1
Identities = 9/34 (26%), Positives = 19/34 (55%)
Frame = +3
Query: 333 SNITSTNTEDADGGSYRCRHCDRVYYSDRSLKHH 434
++I + +T + + C +C R +YS ++L H
Sbjct: 46 TSIVNESTTSTEQKLFSCNYCQRTFYSSQALGGH 79
>At3g11385.1 68416.m01386 DC1 domain-containing protein contains
Pfam protein PF03107 DC1 domain
Length = 766
Score = 27.5 bits (58), Expect = 6.1
Identities = 24/84 (28%), Positives = 31/84 (36%), Gaps = 2/84 (2%)
Frame = +3
Query: 243 TCNNCDKLFTDISSLEFHMRIFHPQAQIADSNITSTNTED--ADGGSYRCRHCDRVYYSD 416
+C CD F L F ++ HP T N E G C V +SD
Sbjct: 220 SCTTCDVEFHSGHCLRFPRKLTHPYHLQHPLTFTFRNDETGITSDGIIDESFCTTV-FSD 278
Query: 417 RSLKHHIKLKHTTDEAMECCYCGK 488
+ KL T E+ C +CGK
Sbjct: 279 SNTSDPKKLGST--ESDHCTWCGK 300
>At5g57520.1 68418.m07187 zinc finger (C2H2 type) family protein
(ZFP2) identical to zinc finger protein 2 (ZFP2)
GI:790674 from [Arabidopsis thaliana]; contains Pfam
domain, PF00096: Zinc finger, C2H2 type
Length = 150
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Frame = +3
Query: 207 HKKTCLPPDNVNTCNNCDKLFTDISSLEFHMRIFHPQAQIADSN---ITSTNTEDAD 368
+ +CL V +CN C + F +L H + +A + S+NT D+D
Sbjct: 41 NSSSCLEQPRVFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKSRELFRSSNTVDSD 97
>At3g10470.1 68416.m01255 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 398
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +3
Query: 321 QIADSNITSTNTEDADGGSY--RCRHCDRVYYSDRSLKHH 434
+ + SN T+TN G Y +C+ CDR + S ++L H
Sbjct: 161 ETSSSNGTTTNGGGGRAGYYVYQCKTCDRTFPSFQALGGH 200
>At2g45120.1 68415.m05615 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 314
Score = 27.1 bits (57), Expect = 8.1
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +3
Query: 378 YRCRHCDRVYYSDRSLKHHIKLKHTTDEAMECCYCGK 488
Y+CR C + + + R+L H++ T A C G+
Sbjct: 4 YKCRFCFKSFINGRALGGHMRSHMLTLSAERCVITGE 40
>At2g17180.1 68415.m01984 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 270
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = +3
Query: 312 PQAQIADSNITSTNTEDADGGSYRCRHCDRVYYSDRSLKHHIKLKHTTDE 461
P +I D + + + G ++RC C RV+ S ++L H++ D+
Sbjct: 190 PPQEIVDQD-KGKSVKLVSGMNHRCNICSRVFSSGQALGGHMRCHWEKDQ 238
>At1g44160.1 68414.m05100 DNAJ chaperone C-terminal
domain-containing protein contains Pfam profile PF01556:
DnaJ C terminal region
Length = 357
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 384 CRHCDRVYYSDRSLKHHIKLKHTTDE 461
CR RV D++ KHH K KH T E
Sbjct: 25 CRSISRVLPRDKT-KHHHKAKHDTKE 49
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,558,688
Number of Sequences: 28952
Number of extensions: 240442
Number of successful extensions: 898
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 790
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 894
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1013649368
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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