Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_O16
         (299 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       23   0.93 
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   1.6  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   2.2  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   2.2  
Z69742-1|CAA93624.1|   72|Tribolium castaneum arylphorin protein.      20   6.6  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    20   6.6  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    19   8.7  

>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 22.6 bits (46), Expect = 0.93
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = -2

Query: 151 PARKMARCSR*VLDVDCNCCN 89
           P R    C   + D +CNC N
Sbjct: 114 PCRNNGSCVDRIADFECNCKN 134


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.8 bits (44), Expect = 1.6
 Identities = 5/17 (29%), Positives = 12/17 (70%)
 Frame = +1

Query: 49  WSRSKAGRKNSKFYYSS 99
           W ++ + +K +++YY S
Sbjct: 229 WKKNDSSKKKTRYYYRS 245


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 2.2
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +3

Query: 171 IAPRSAYEQRDDLSI 215
           +A +SAY Q+DDL I
Sbjct: 150 LASQSAYVQQDDLFI 164


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 2.2
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +3

Query: 171 IAPRSAYEQRDDLSI 215
           +A +SAY Q+DDL I
Sbjct: 150 LASQSAYVQQDDLFI 164


>Z69742-1|CAA93624.1|   72|Tribolium castaneum arylphorin protein.
          Length = 72

 Score = 19.8 bits (39), Expect = 6.6
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +2

Query: 35 RGNCYGRDQRLEGK 76
          RG C G+D +  G+
Sbjct: 8  RGRCEGKDSKWRGE 21


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 19.8 bits (39), Expect = 6.6
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 91  NRIWSFSFQPLISTIAVST 35
           +R W  S QP++ST   +T
Sbjct: 232 HRSWCSSSQPVLSTTNSTT 250


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 19.4 bits (38), Expect = 8.7
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +1

Query: 88  YYSSYNPHPRPILN 129
           YY+S +  P P+ N
Sbjct: 338 YYASLDETPNPVTN 351


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,813
Number of Sequences: 336
Number of extensions: 1264
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 48
effective length of database: 106,457
effective search space used:  5429307
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)