Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_O16
         (299 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_40775| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   1.2  
SB_19346| Best HMM Match : ATP-synt_E_2 (HMM E-Value=2.4)              28   1.6  
SB_5534| Best HMM Match : Peptidase_C48 (HMM E-Value=0.00016)          28   1.6  
SB_47849| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   1.6  
SB_32051| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   1.6  
SB_10966| Best HMM Match : Peptidase_C48 (HMM E-Value=1.6)             27   2.8  
SB_32532| Best HMM Match : RHS_repeat (HMM E-Value=3.2e-06)            26   4.9  
SB_18916| Best HMM Match : GPS (HMM E-Value=1e-17)                     26   4.9  
SB_22048| Best HMM Match : RHS_repeat (HMM E-Value=0.00058)            25   8.6  

>SB_40775| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 712

 Score = 28.3 bits (60), Expect = 1.2
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +1

Query: 1   LLQPTLFSRRYPWKLLWSRSKAGRKNSKFYYSSYNPH 111
           LL+P     RY +K  +    A  +  KFYY+   PH
Sbjct: 139 LLEPVFLKSRYCFKSSYDLVSASLRQWKFYYNVSLPH 175


>SB_19346| Best HMM Match : ATP-synt_E_2 (HMM E-Value=2.4)
          Length = 528

 Score = 27.9 bits (59), Expect = 1.6
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +3

Query: 3   FAADSLLKTVPVETAMVEIKGWKE 74
           F  DS LK V  E+  VE+ GW+E
Sbjct: 410 FVIDSYLKIVKSESTNVEVFGWEE 433


>SB_5534| Best HMM Match : Peptidase_C48 (HMM E-Value=0.00016)
          Length = 313

 Score = 27.9 bits (59), Expect = 1.6
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +3

Query: 3   FAADSLLKTVPVETAMVEIKGWKE 74
           F  DS LK V  E+  VE+ GW+E
Sbjct: 127 FVIDSYLKIVKSESTNVEVFGWEE 150


>SB_47849| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1922

 Score = 27.9 bits (59), Expect = 1.6
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +3

Query: 3    FAADSLLKTVPVETAMVEIKGWKE 74
            F  DS LK V  E+  VE+ GW+E
Sbjct: 1675 FVIDSYLKIVKSESTNVEVFGWEE 1698


>SB_32051| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1090

 Score = 27.9 bits (59), Expect = 1.6
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +3

Query: 3   FAADSLLKTVPVETAMVEIKGWKE 74
           F  DS LK V  E+  VE+ GW+E
Sbjct: 825 FVIDSYLKIVKSESTNVEVFGWEE 848


>SB_10966| Best HMM Match : Peptidase_C48 (HMM E-Value=1.6)
          Length = 495

 Score = 27.1 bits (57), Expect = 2.8
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +3

Query: 3   FAADSLLKTVPVETAMVEIKGWKE 74
           F  DS LK V  E+  VE+ GW+E
Sbjct: 285 FVIDSHLKIVKSESTNVEVFGWEE 308


>SB_32532| Best HMM Match : RHS_repeat (HMM E-Value=3.2e-06)
          Length = 618

 Score = 26.2 bits (55), Expect = 4.9
 Identities = 15/34 (44%), Positives = 15/34 (44%)
 Frame = +1

Query: 16  LFSRRYPWKLLWSRSKAGRKNSKFYYSSYNPHPR 117
           L SR YP     SR          YY S NPHPR
Sbjct: 576 LQSRYYPSGNTQSRYYPSGNPQSRYYPSGNPHPR 609


>SB_18916| Best HMM Match : GPS (HMM E-Value=1e-17)
          Length = 1470

 Score = 26.2 bits (55), Expect = 4.9
 Identities = 13/52 (25%), Positives = 24/52 (46%)
 Frame = +1

Query: 7   QPTLFSRRYPWKLLWSRSKAGRKNSKFYYSSYNPHPRPILNTSPFSSRETKN 162
           QP L +  Y +   W  S   ++N   +  +  P  +PI NT+ + +   K+
Sbjct: 462 QPKLSNVAYGYNNRWKNSGTLQRNQAMWQRNKLPVRKPIWNTNQYVTNSWKS 513


>SB_22048| Best HMM Match : RHS_repeat (HMM E-Value=0.00058)
          Length = 820

 Score = 25.4 bits (53), Expect = 8.6
 Identities = 16/41 (39%), Positives = 18/41 (43%)
 Frame = +1

Query: 16  LFSRRYPWKLLWSRSKAGRKNSKFYYSSYNPHPRPILNTSP 138
           L SR YP   L SR          YY S NP PR   + +P
Sbjct: 373 LQSRYYPSGNLQSRYYPSGNPQPRYYPSGNPQPRYYTSGNP 413


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,784,151
Number of Sequences: 59808
Number of extensions: 173762
Number of successful extensions: 438
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 413
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 438
length of database: 16,821,457
effective HSP length: 71
effective length of database: 12,575,089
effective search space used: 352102492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)