Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_O14
(491 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p... 33 0.15
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt... 33 0.15
U40415-5|AAK39251.1| 655|Caenorhabditis elegans Hypothetical pr... 31 0.34
AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical... 30 0.79
Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z81112-6|CAB03277.1| 673|Caenorhabditis elegans Hypothetical pr... 28 4.2
Z77136-10|CAB00887.1| 673|Caenorhabditis elegans Hypothetical p... 28 4.2
AL117207-17|CAI79269.1| 421|Caenorhabditis elegans Hypothetical... 27 9.8
AC024881-9|AAK71410.1| 588|Caenorhabditis elegans Hypothetical ... 27 9.8
>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
protein F41G3.12 protein.
Length = 1483
Score = 32.7 bits (71), Expect = 0.15
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +1
Query: 421 TPEYNPVCGSDNKTYKNQGRL 483
T E+ VCGSD KTY N+ RL
Sbjct: 469 TDEFKEVCGSDGKTYSNECRL 489
Score = 29.5 bits (63), Expect = 1.4
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 397 KCAENCISTPEYNPVCGSDNKTYKNQ 474
KC+E C + VCG+D KTY N+
Sbjct: 318 KCSEQCTMNSAH--VCGTDGKTYLNE 341
>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
protein) homologfamily member protein.
Length = 1473
Score = 32.7 bits (71), Expect = 0.15
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +1
Query: 421 TPEYNPVCGSDNKTYKNQGRL 483
T E+ VCGSD KTY N+ RL
Sbjct: 477 TDEFKEVCGSDGKTYSNECRL 497
Score = 29.5 bits (63), Expect = 1.4
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 397 KCAENCISTPEYNPVCGSDNKTYKNQ 474
KC+E C + VCG+D KTY N+
Sbjct: 326 KCSEQCTMNSAH--VCGTDGKTYLNE 349
>U40415-5|AAK39251.1| 655|Caenorhabditis elegans Hypothetical
protein K02G10.5 protein.
Length = 655
Score = 31.5 bits (68), Expect = 0.34
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 391 IEKCAENCISTPEYNPVCGSDNK 459
+E C+ENC +NPVC D+K
Sbjct: 442 LETCSENCHCDSFFNPVCSEDSK 464
>AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical
protein Y37A1B.11 protein.
Length = 691
Score = 30.3 bits (65), Expect = 0.79
Identities = 14/54 (25%), Positives = 28/54 (51%)
Frame = +2
Query: 326 KHRYQVKGKHQLLALVEHHDKQLRNARRIAFQHQNTTPCVVAIIKLTKTREDYF 487
+ R++ + +H AL +H ++L +R A + CV+++IK + E F
Sbjct: 81 EQRHRRRRRHNETALEDHLSEKLSREKRAAAHIMRSRKCVISVIKKMSSMECSF 134
>Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical
protein F29G6.1 protein.
Length = 1170
Score = 29.1 bits (62), Expect = 1.8
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +1
Query: 382 RQTIEKCAENCISTPEYNPVCGSDNKTYKN 471
R + + C NC +T E++PVC ++ Y+N
Sbjct: 109 RCSSKDCNHNCTNT-EFDPVCDTNGSVYRN 137
Score = 27.5 bits (58), Expect = 5.6
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +1
Query: 409 NCISTPEYNPVCGSDNKTYKNQGRLFC 489
+C PVCG+DN TY N L C
Sbjct: 18 DCDCPSVIRPVCGTDNVTYNNLCFLRC 44
>Z81112-6|CAB03277.1| 673|Caenorhabditis elegans Hypothetical
protein ZC376.3 protein.
Length = 673
Score = 27.9 bits (59), Expect = 4.2
Identities = 12/23 (52%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Frame = +1
Query: 406 ENCISTPEYNPVCGSD-NKTYKN 471
+ + T EY P C SD KTYKN
Sbjct: 73 DGILETKEYKPACMSDAKKTYKN 95
>Z77136-10|CAB00887.1| 673|Caenorhabditis elegans Hypothetical
protein ZC376.3 protein.
Length = 673
Score = 27.9 bits (59), Expect = 4.2
Identities = 12/23 (52%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Frame = +1
Query: 406 ENCISTPEYNPVCGSD-NKTYKN 471
+ + T EY P C SD KTYKN
Sbjct: 73 DGILETKEYKPACMSDAKKTYKN 95
>AL117207-17|CAI79269.1| 421|Caenorhabditis elegans Hypothetical
protein Y60A3A.25 protein.
Length = 421
Score = 26.6 bits (56), Expect = 9.8
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +1
Query: 178 IDKNGWNKSQDGNRPEWIPIQNGYRIQYPLDNN 276
+D + + QD N W+ + N + Q P DNN
Sbjct: 106 MDMQPYQEYQDNNESGWVDLNNDNQFQQP-DNN 137
>AC024881-9|AAK71410.1| 588|Caenorhabditis elegans Hypothetical
protein Y97E10B.1 protein.
Length = 588
Score = 26.6 bits (56), Expect = 9.8
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -2
Query: 457 YYRYHTRGCILVLKCNSPRI 398
YYRYH G I +KC P++
Sbjct: 523 YYRYHYSGRIGEIKCPGPQL 542
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,072,323
Number of Sequences: 27780
Number of extensions: 262274
Number of successful extensions: 709
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 676
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 709
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 924715866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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