Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_O13
(514 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPB24D3.10c |agl1|agl|alpha-glucosidase Agl1|Schizosaccharomyc... 29 0.31
SPAC17G6.03 |||phosphoprotein phosphatase|Schizosaccharomyces po... 27 2.2
SPBP4H10.17c |||carboxyl methyl esterase|Schizosaccharomyces pom... 26 3.8
SPAC4A8.10 |||lipase |Schizosaccharomyces pombe|chr 1|||Manual 26 3.8
SPCC1183.04c |pet127||mitochondrial membrane protein Pet127|Schi... 25 5.0
SPBC18H10.05 |||WD repeat protein Wdr44 family, WD repeat protei... 25 6.7
SPBC685.09 |orc2|orp2|origin recognition complex subunit Orc2|Sc... 25 6.7
SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces... 25 8.8
SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase ki... 25 8.8
>SPAPB24D3.10c |agl1|agl|alpha-glucosidase Agl1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 969
Score = 29.5 bits (63), Expect = 0.31
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Frame = +3
Query: 72 NNTSILSNFDLNA----WWGPASDMDKVNTTVRPFKITFEDEMIDDFMYRVKNF 221
NNT++L NF NA +W +V R K+ FED+ I+ V+N+
Sbjct: 139 NNTNLLYNFSYNANPFEFWVTRKSDGEVLFDTRGQKLVFEDQYIELTTNMVENY 192
>SPAC17G6.03 |||phosphoprotein phosphatase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 635
Score = 26.6 bits (56), Expect = 2.2
Identities = 14/66 (21%), Positives = 25/66 (37%), Gaps = 1/66 (1%)
Frame = +3
Query: 51 SFNGVTSNNTSI-LSNFDLNAWWGPASDMDKVNTTVRPFKITFEDEMIDDFMYRVKNFRF 227
SF+G T + +S F L WW ++ + P + + D + F
Sbjct: 190 SFSGATDTVRVLPVSQFSLQPWWNDMVSNKDIDLILIPAHVPVHNASELDIVLSELRIHF 249
Query: 228 PAKPLE 245
P P++
Sbjct: 250 PTTPIQ 255
>SPBP4H10.17c |||carboxyl methyl esterase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 341
Score = 25.8 bits (54), Expect = 3.8
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 435 LLMMHGFGSSFLEFYDVIPYLIADSD 512
L++ HG GSS + F V L+++SD
Sbjct: 72 LVLQHGAGSSAMSFAPVTQELLSNSD 97
>SPAC4A8.10 |||lipase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 723
Score = 25.8 bits (54), Expect = 3.8
Identities = 9/33 (27%), Positives = 21/33 (63%)
Frame = +3
Query: 375 GLDVHFLKVPAVSTNKTVLPLLMMHGFGSSFLE 473
G D+ +LK + ++K+V L+++ GF ++ +
Sbjct: 257 GADMEYLKEKLIESSKSVKELVVVRGFTGNYCQ 289
>SPCC1183.04c |pet127||mitochondrial membrane protein
Pet127|Schizosaccharomyces pombe|chr 3|||Manual
Length = 524
Score = 25.4 bits (53), Expect = 5.0
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +3
Query: 234 KPLEDTFQYGFNSNELKKWQL 296
KPL+D FQYG S+ L + QL
Sbjct: 238 KPLKDVFQYGRCSSLLVRSQL 258
>SPBC18H10.05 |||WD repeat protein Wdr44 family, WD repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 586
Score = 25.0 bits (52), Expect = 6.7
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = -1
Query: 166 LKGLTVVLTLSISLAGPHHAFKS 98
+ G+T+VL + L HH F++
Sbjct: 551 MAGMTIVLCVDYDLGNSHHGFRN 573
>SPBC685.09 |orc2|orp2|origin recognition complex subunit
Orc2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 25.0 bits (52), Expect = 6.7
Identities = 20/76 (26%), Positives = 29/76 (38%)
Frame = +3
Query: 264 FNSNELKKWQLYLIKEYSFVKLAERVNQYNHFLINIQGLDVHFLKVPAVSTNKTVLPLLM 443
F S +W L+ ++ L HFL + + + V K P L
Sbjct: 242 FQSRNFHQWYFELVNNFNL--LFYGFGSKEHFLSSFVEKKLPCFPIFVV---KGYFPQLQ 296
Query: 444 MHGFGSSFLEFYDVIP 491
+ SSFLEF +V P
Sbjct: 297 LKNVLSSFLEFLEVTP 312
>SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3699
Score = 24.6 bits (51), Expect = 8.8
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +3
Query: 276 ELKKWQLYLIKEYSFVKLAERVNQYNHFLINIQGLDVHFLKVP 404
+L+KW+ Y + S V + + QY+ FL ++VP
Sbjct: 3271 KLRKWRSYFERLLSKVPKKQYLEQYSSFLCEFHHQKFDEIEVP 3313
>SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase
kinase Win1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1436
Score = 24.6 bits (51), Expect = 8.8
Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Frame = +3
Query: 297 YLIKEYSFVKLAERVNQYNHFLINIQGLDVH--FLKVPA-VSTNKTVLPLLMMHGFGSSF 467
Y+IKE S L +R+ + NH L ++ ++ VP + + +L ++ F
Sbjct: 747 YVIKENSLSLLIQRLEESNHVLTYTASIEHEGAYVIVPGHLVDSPNILREVLSMTFNKGD 806
Query: 468 LEFYDVIPYLI 500
F V PY +
Sbjct: 807 NNFESVPPYAV 817
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,029,481
Number of Sequences: 5004
Number of extensions: 40428
Number of successful extensions: 116
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 116
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 206265012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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