SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_O13
         (514 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ459959-1|CAD31058.1|  462|Anopheles gambiae dopachrome convers...    25   2.0  
CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal ...    23   4.6  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   8.0  
AF513635-1|AAM53607.1|  212|Anopheles gambiae glutathione S-tran...    23   8.0  

>AJ459959-1|CAD31058.1|  462|Anopheles gambiae dopachrome conversion
           enzyme protein.
          Length = 462

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 452 SVHHKKR*YCFVSRYRW 402
           +VHHK R +  V+R RW
Sbjct: 57  AVHHKNRVFVAVARRRW 73


>CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal RNA
           adenine dimethylaseprotein.
          Length = 375

 Score = 23.4 bits (48), Expect = 4.6
 Identities = 12/45 (26%), Positives = 22/45 (48%)
 Frame = +3

Query: 306 KEYSFVKLAERVNQYNHFLINIQGLDVHFLKVPAVSTNKTVLPLL 440
           +E+  V++  R N ++H L +   L   F+    VS    ++P L
Sbjct: 206 EEWYLVRIVPRRNLFDHLLPDNLSLFASFVTQHYVSRRNRIIPSL 250


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 22.6 bits (46), Expect = 8.0
 Identities = 21/55 (38%), Positives = 30/55 (54%)
 Frame = +3

Query: 258  YGFNSNELKKWQLYLIKEYSFVKLAERVNQYNHFLINIQGLDVHFLKVPAVSTNK 422
            YGF + EL ++ +   KE+SF  LA+   Q+          D H+LK+PA ST K
Sbjct: 1327 YGFEAYELNRYGVD--KEWSF-NLADV--QFER--------DNHYLKLPASSTLK 1368


>AF513635-1|AAM53607.1|  212|Anopheles gambiae glutathione
           S-transferase D4 protein.
          Length = 212

 Score = 22.6 bits (46), Expect = 8.0
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -1

Query: 136 SISLAGPHHAFKSKLDNIEVLFE 68
           ++S   PHH     +DN  V+FE
Sbjct: 41  TLSKLNPHHILPMLVDNGTVVFE 63


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 489,418
Number of Sequences: 2352
Number of extensions: 8636
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46514490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -