Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_O13
         (514 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    25   0.46 
DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein ...    21   7.5  
AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein ...    21   7.5  
DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex det...    21   9.9  

>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 25.0 bits (52), Expect = 0.46
 Identities = 11/45 (24%), Positives = 26/45 (57%)
 Frame = +3

Query: 306 KEYSFVKLAERVNQYNHFLINIQGLDVHFLKVPAVSTNKTVLPLL 440
           KE+ ++  A   +++  +   +QG+  +   V ++S NK +LP++
Sbjct: 728 KEWLYLHRARSESEFEMYHQQLQGVAKNKKNVGSMSRNKALLPVI 772


>DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein 1
           protein.
          Length = 116

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 11/48 (22%), Positives = 20/48 (41%)
 Frame = +3

Query: 159 PFKITFEDEMIDDFMYRVKNFRFPAKPLEDTFQYGFNSNELKKWQLYL 302
           P  + F+  + + F  + K      K   D     F +NE +KW  ++
Sbjct: 58  PDSVFFKSHITEAFQTQCKKCTEIQKQNLDKLAEWFTTNEPEKWNHFV 105


>AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein
           protein.
          Length = 116

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 11/48 (22%), Positives = 20/48 (41%)
 Frame = +3

Query: 159 PFKITFEDEMIDDFMYRVKNFRFPAKPLEDTFQYGFNSNELKKWQLYL 302
           P  + F+  + + F  + K      K   D     F +NE +KW  ++
Sbjct: 58  PDSVFFKSHITEAFQTQCKKCTEIQKQNLDKLAEWFTTNEPEKWNHFV 105


>DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -2

Query: 264 NHIERYPPKVSRESGNF 214
           NHIE+ P  V    GNF
Sbjct: 107 NHIEQIPVPVPVYYGNF 123


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,763
Number of Sequences: 438
Number of extensions: 2599
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14232156
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)