Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_O11
         (614 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80226-1|AAB38510.1|  500|Homo sapiens gamma-aminobutyric acid t...    97   3e-20
BC015628-1|AAH15628.1|  500|Homo sapiens 4-aminobutyrate aminotr...    97   3e-20
BC031413-1|AAH31413.1|  500|Homo sapiens 4-aminobutyrate aminotr...    96   1e-19
S75578-1|AAD14176.1|  450|Homo sapiens 4-aminobutyrate aminotran...    95   2e-19
L32961-1|AAA74449.1|  500|Homo sapiens 4-aminobutyrate aminotran...    93   9e-19
AK223128-1|BAD96848.1|  502|Homo sapiens alanine-glyoxylate amin...    31   3.2  
AB193309-1|BAD66662.1|  514|Homo sapiens beta-alanine-pyruvate a...    31   3.2  

>U80226-1|AAB38510.1|  500|Homo sapiens gamma-aminobutyric acid
           transaminase protein.
          Length = 500

 Score = 97.5 bits (232), Expect = 3e-20
 Identities = 45/111 (40%), Positives = 73/111 (65%), Gaps = 1/111 (0%)
 Frame = +3

Query: 57  STIFSKMMSKMIMQRIKLVLPSTFKGSRCLSSILLE-EPQKPSIKTSIPGPKSQKLMQEL 233
           S + ++ ++       +L++P +   S+  + + +E +   P +KT +PGP+SQ+LM++L
Sbjct: 3   SMLLAQRLACSFQHSYRLLVPGSRHISQAAAKVDVEFDYDGPLMKTEVPGPRSQELMKQL 62

Query: 234 SAIQQAGAVQLFADYDKSIGNYFVDADGNEFLDAFTQISSQPVGYNHPELL 386
           + IQ A AV  F +Y++S GNY VD DGN  LD ++QISS P+GY+HP LL
Sbjct: 63  NIIQNAEAVHFFCNYEESRGNYLVDVDGNRMLDLYSQISSVPIGYSHPALL 113



 Score = 57.2 bits (132), Expect = 4e-08
 Identities = 27/62 (43%), Positives = 37/62 (59%)
 Frame = +2

Query: 419 LWVNRPALGVFPSADWPEKLKNVLLSVAPEQFNSVVTMMCGSCANENAYKAVFMWYRXRE 598
           ++VNRPALG+ P  ++ EKL+  LLSVAP+   S           +   K +FMWYR +E
Sbjct: 124 MFVNRPALGILPPENFVEKLRQSLLSVAPKGCPSSSPWPACPAPMKTTLKTIFMWYRSKE 183

Query: 599 RG 604
           RG
Sbjct: 184 RG 185


>BC015628-1|AAH15628.1|  500|Homo sapiens 4-aminobutyrate
           aminotransferase protein.
          Length = 500

 Score = 97.5 bits (232), Expect = 3e-20
 Identities = 45/111 (40%), Positives = 73/111 (65%), Gaps = 1/111 (0%)
 Frame = +3

Query: 57  STIFSKMMSKMIMQRIKLVLPSTFKGSRCLSSILLE-EPQKPSIKTSIPGPKSQKLMQEL 233
           S + ++ ++       +L++P +   S+  + + +E +   P +KT +PGP+SQ+LM++L
Sbjct: 3   SMLLAQRLACSFQHSYRLLVPGSRHISQAAAKVDVEFDYDGPLMKTEVPGPRSQELMKQL 62

Query: 234 SAIQQAGAVQLFADYDKSIGNYFVDADGNEFLDAFTQISSQPVGYNHPELL 386
           + IQ A AV  F +Y++S GNY VD DGN  LD ++QISS P+GY+HP LL
Sbjct: 63  NIIQNAEAVHFFCNYEESRGNYLVDVDGNRMLDLYSQISSVPIGYSHPALL 113



 Score = 88.6 bits (210), Expect = 2e-17
 Identities = 36/62 (58%), Positives = 49/62 (79%)
 Frame = +2

Query: 419 LWVNRPALGVFPSADWPEKLKNVLLSVAPEQFNSVVTMMCGSCANENAYKAVFMWYRXRE 598
           ++VNRPALG+ P  ++ EKL+  LLSVAP+  + ++TM CGSC+NENA K +FMWYR +E
Sbjct: 124 MFVNRPALGILPPENFVEKLRQSLLSVAPKGMSQLITMACGSCSNENALKTIFMWYRSKE 183

Query: 599 RG 604
           RG
Sbjct: 184 RG 185


>BC031413-1|AAH31413.1|  500|Homo sapiens 4-aminobutyrate
           aminotransferase protein.
          Length = 500

 Score = 95.9 bits (228), Expect = 1e-19
 Identities = 44/111 (39%), Positives = 73/111 (65%), Gaps = 1/111 (0%)
 Frame = +3

Query: 57  STIFSKMMSKMIMQRIKLVLPSTFKGSRCLSSILLE-EPQKPSIKTSIPGPKSQKLMQEL 233
           S + ++ ++       +L++P +   S+  + + +E +   P +KT +PGP+S++LM++L
Sbjct: 3   SMLLAQRLACSFQHSYRLLVPGSRHISQAAAKVDVEFDYDGPLMKTEVPGPRSRELMKQL 62

Query: 234 SAIQQAGAVQLFADYDKSIGNYFVDADGNEFLDAFTQISSQPVGYNHPELL 386
           + IQ A AV  F +Y++S GNY VD DGN  LD ++QISS P+GY+HP LL
Sbjct: 63  NIIQNAEAVHFFCNYEESRGNYLVDVDGNRMLDLYSQISSVPIGYSHPALL 113



 Score = 88.6 bits (210), Expect = 2e-17
 Identities = 36/62 (58%), Positives = 49/62 (79%)
 Frame = +2

Query: 419 LWVNRPALGVFPSADWPEKLKNVLLSVAPEQFNSVVTMMCGSCANENAYKAVFMWYRXRE 598
           ++VNRPALG+ P  ++ EKL+  LLSVAP+  + ++TM CGSC+NENA K +FMWYR +E
Sbjct: 124 MFVNRPALGILPPENFVEKLRQSLLSVAPKGMSQLITMACGSCSNENALKTIFMWYRSKE 183

Query: 599 RG 604
           RG
Sbjct: 184 RG 185


>S75578-1|AAD14176.1|  450|Homo sapiens 4-aminobutyrate
           aminotransferase protein.
          Length = 450

 Score = 94.7 bits (225), Expect = 2e-19
 Identities = 40/70 (57%), Positives = 54/70 (77%)
 Frame = +3

Query: 177 PSIKTSIPGPKSQKLMQELSAIQQAGAVQLFADYDKSIGNYFVDADGNEFLDAFTQISSQ 356
           P +KT +PGP+SQ+LM++L+ IQ A AV  F +Y++S GNY VD DGN  LD ++QISS 
Sbjct: 9   PLMKTEVPGPRSQELMKQLNIIQNAEAVHFFCNYEESRGNYLVDVDGNRMLDLYSQISSV 68

Query: 357 PVGYNHPELL 386
           P+GY+HP LL
Sbjct: 69  PIGYSHPALL 78



 Score = 88.6 bits (210), Expect = 2e-17
 Identities = 36/62 (58%), Positives = 49/62 (79%)
 Frame = +2

Query: 419 LWVNRPALGVFPSADWPEKLKNVLLSVAPEQFNSVVTMMCGSCANENAYKAVFMWYRXRE 598
           ++VNRPALG+ P  ++ EKL+  LLSVAP+  + ++TM CGSC+NENA K +FMWYR +E
Sbjct: 89  MFVNRPALGILPPENFVEKLRQSLLSVAPKGMSQLITMACGSCSNENALKTIFMWYRSKE 148

Query: 599 RG 604
           RG
Sbjct: 149 RG 150


>L32961-1|AAA74449.1|  500|Homo sapiens 4-aminobutyrate
           aminotransferase protein.
          Length = 500

 Score = 92.7 bits (220), Expect = 9e-19
 Identities = 43/111 (38%), Positives = 72/111 (64%), Gaps = 1/111 (0%)
 Frame = +3

Query: 57  STIFSKMMSKMIMQRIKLVLPSTFKGSRCLSSILLE-EPQKPSIKTSIPGPKSQKLMQEL 233
           S + ++ ++       +L++P +   S+  + + +E +   P +KT +PGP+SQ+LM++L
Sbjct: 3   SMLLAQRLACSFQHTYRLLVPGSRHISQAAAKVDVEFDYDGPLMKTEVPGPRSQELMKQL 62

Query: 234 SAIQQAGAVQLFADYDKSIGNYFVDADGNEFLDAFTQISSQPVGYNHPELL 386
           + IQ A AV  F +Y++S GNY VD DGN  LD ++QISS P+GY+ P L+
Sbjct: 63  NIIQNAEAVHFFCNYEESRGNYLVDVDGNRMLDLYSQISSVPIGYSDPALV 113



 Score = 85.4 bits (202), Expect = 1e-16
 Identities = 35/62 (56%), Positives = 48/62 (77%)
 Frame = +2

Query: 419 LWVNRPALGVFPSADWPEKLKNVLLSVAPEQFNSVVTMMCGSCANENAYKAVFMWYRXRE 598
           ++VNRPAL + P  ++ EKL+  LLSVAP+  + ++TM CGSC+NENA K +FMWYR +E
Sbjct: 124 MFVNRPALEILPPENFVEKLRQSLLSVAPKGMSQLITMACGSCSNENALKTIFMWYRSKE 183

Query: 599 RG 604
           RG
Sbjct: 184 RG 185


>AK223128-1|BAD96848.1|  502|Homo sapiens alanine-glyoxylate
           aminotransferase 2 precursor variant protein.
          Length = 502

 Score = 31.1 bits (67), Expect = 3.2
 Identities = 12/29 (41%), Positives = 20/29 (68%)
 Frame = +3

Query: 297 YFVDADGNEFLDAFTQISSQPVGYNHPEL 383
           +  DA+GN +LD F+ I +  VG+ HP++
Sbjct: 83  WLFDAEGNRYLDFFSGIVTVSVGHCHPKV 111


>AB193309-1|BAD66662.1|  514|Homo sapiens beta-alanine-pyruvate
           aminotransferase protein.
          Length = 514

 Score = 31.1 bits (67), Expect = 3.2
 Identities = 12/29 (41%), Positives = 20/29 (68%)
 Frame = +3

Query: 297 YFVDADGNEFLDAFTQISSQPVGYNHPEL 383
           +  DA+GN +LD F+ I +  VG+ HP++
Sbjct: 95  WLFDAEGNRYLDFFSGIVTVSVGHCHPKV 123


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,450,164
Number of Sequences: 237096
Number of extensions: 1653898
Number of successful extensions: 3027
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2893
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3026
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6579110070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)