Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_O11
(614 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g39660.1 68417.m05608 alanine--glyoxylate aminotransferase, p... 30 1.1
At3g08860.1 68416.m01030 alanine--glyoxylate aminotransferase, p... 30 1.1
At2g38400.1 68415.m04717 alanine--glyoxylate aminotransferase, p... 28 4.3
At5g65890.1 68418.m08294 ACT domain-containing protein (ACR1) co... 28 5.7
At3g24170.1 68416.m03034 glutathione reductase, putative identic... 28 5.7
At3g22200.1 68416.m02801 4-aminobutyrate aminotransferase / gamm... 27 7.5
At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase fa... 27 7.5
At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase fa... 27 7.5
At1g19220.1 68414.m02392 transcriptional factor B3 family protei... 27 7.5
>At4g39660.1 68417.m05608 alanine--glyoxylate aminotransferase,
putative / beta-alanine-pyruvate aminotransferase,
putative / AGT, putative similar to SP|Q64565
Alanine--glyoxylate aminotransferase 2, mitochondrial
precursor (EC 2.6.1.44) (AGT 2) (Beta-alanine-pyruvate
aminotransferase) {Rattus norvegicus}; contains Pfam
profile PF00202: aminotransferase, class III
Length = 476
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 297 YFVDADGNEFLDAFTQISSQPVGYNHPELL 386
Y D G +LDAF I + G+ HP++L
Sbjct: 88 YLYDESGRRYLDAFAGIVTVSCGHCHPDIL 117
>At3g08860.1 68416.m01030 alanine--glyoxylate aminotransferase,
putative / beta-alanine-pyruvate aminotransferase,
putative / AGT, putative similar to similar to SP|Q64565
Alanine--glyoxylate aminotransferase 2, mitochondrial
precursor (EC 2.6.1.44) (AGT 2) (Beta-alanine-pyruvate
aminotransferase) {Rattus norvegicus}; contains Pfam
profile PF00202: aminotransferase, class III
Length = 481
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 297 YFVDADGNEFLDAFTQISSQPVGYNHPELL 386
Y D +G +LDAF I++ G+ HPE++
Sbjct: 93 YVFDENGRRYLDAFGGIATVSCGHCHPEVV 122
>At2g38400.1 68415.m04717 alanine--glyoxylate aminotransferase,
putative / beta-alanine-pyruvate aminotransferase,
putative / AGT, putative similar to SP|Q64565
Alanine--glyoxylate aminotransferase 2, mitochondrial
precursor (EC 2.6.1.44) (AGT 2) (Beta-alanine-pyruvate
aminotransferase) {Rattus norvegicus}; contains Pfam
profile PF00202: aminotransferase, class III
Length = 477
Score = 28.3 bits (60), Expect = 4.3
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 297 YFVDADGNEFLDAFTQISSQPVGYNHPELL 386
Y D G +LDAF I+ G+ HP+++
Sbjct: 90 YLFDESGRRYLDAFAGIAVVNCGHCHPDVV 119
>At5g65890.1 68418.m08294 ACT domain-containing protein (ACR1)
contains Pfam profile ACT domain PF01842
Length = 477
Score = 27.9 bits (59), Expect = 5.7
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 258 VQLFADYDKSIGNYFVDADGNEFLDAF 338
VQ+ AD D I ++ +DG F+D F
Sbjct: 54 VQVLADLDLVISKCYISSDGEWFMDVF 80
>At3g24170.1 68416.m03034 glutathione reductase, putative identical
to GB:P48641 from [Arabidopsis thaliana]
Length = 499
Score = 27.9 bits (59), Expect = 5.7
Identities = 13/52 (25%), Positives = 29/52 (55%)
Frame = +3
Query: 138 RCLSSILLEEPQKPSIKTSIPGPKSQKLMQELSAIQQAGAVQLFADYDKSIG 293
+ L ++++E I S+ GP + ++MQ ++ + GA + A +D ++G
Sbjct: 421 KTLMKLIVDEKSDKVIGASMCGPDAAEIMQGIAIALKCGATK--AQFDSTVG 470
>At3g22200.1 68416.m02801 4-aminobutyrate aminotransferase /
gamma-amino-N-butyrate transaminase / GABA transaminase
/ beta-alanine--oxoglutarate aminotransferase identical
to gamma-aminobutyrate transaminase subunit precursor
[Arabidopsis thaliana] (EC 2.6.1.19) GI:14030435;
contains Pfam profile PF00202: aminotransferase, class
III; identical to cDNA gamma-aminobutyrate transaminase
subunit precursor, nuclear gene for mitochondrial
product GI:14030434
Length = 504
Score = 27.5 bits (58), Expect = 7.5
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +3
Query: 282 KSIGNYFVDADGNEFLDAFTQISSQPVGYNHPELL 386
KS G+Y D G ++LD+ + +G N P L+
Sbjct: 75 KSEGSYVYDDTGKKYLDSLAGLWCTALGGNEPRLV 109
>At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +3
Query: 291 GNYFVDA-DGNEFLDAFTQISSQPVGYNHPE 380
G YF+ GN+F+ F I +P+ N+P+
Sbjct: 267 GAYFMQGPSGNKFVGVFKPIDEEPMAENNPQ 297
>At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +3
Query: 291 GNYFVDA-DGNEFLDAFTQISSQPVGYNHPE 380
G YF+ GN+F+ F I +P+ N+P+
Sbjct: 267 GAYFMQGPSGNKFVGVFKPIDEEPMAENNPQ 297
>At1g19220.1 68414.m02392 transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related contains Pfam
profile: PF02309 AUX/IAA family
Length = 1086
Score = 27.5 bits (58), Expect = 7.5
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = +3
Query: 135 SRCLSSILLEEPQKPSIKTSIPGPKSQKLMQELSAIQQAGAVQL 266
S+ L LL++ Q+ + SIP P S L +LSA+QQ + QL
Sbjct: 643 SQQLQLQLLQKLQQQQQQQSIP-PVSSSLQPQLSALQQTQSHQL 685
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,625,506
Number of Sequences: 28952
Number of extensions: 246094
Number of successful extensions: 666
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 666
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1236350304
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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