Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_O10
         (484 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    25   0.37 
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    23   1.5  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   6.0  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 25.0 bits (52), Expect = 0.37
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = -1

Query: 130 FSIFFYIFNNLIYKTYGLI*IFTKSSPFFS 41
           F+I FY++  ++ + + LI +  K   FFS
Sbjct: 46  FNIVFYMYTLILEERFKLINLIIKQEEFFS 75


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 11/40 (27%), Positives = 22/40 (55%)
 Frame = +2

Query: 362 NYSKRLAFSYLEEIAQEFYQQYGKRVNTVTRPYTFIEFDT 481
           ++ + +++ +LE +A E      ++ NTVT  +T    DT
Sbjct: 106 DFLREISWIFLETVANENTTNCPEQKNTVTVTFTVQSDDT 145


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = +1

Query: 418 SAVREKGEHSDAAVHIHRVRHV 483
           +A   +  H  A  HIH   HV
Sbjct: 315 AATNNQNHHHHAGHHIHAQHHV 336


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,586
Number of Sequences: 336
Number of extensions: 2322
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11352204
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)