Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_O10
(484 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g11890.1 68414.m01371 vesicle transport protein SEC22, putati... 125 2e-29
At5g52270.1 68418.m06487 vesicle transport protein-related simil... 76 1e-14
At5g22360.1 68418.m02609 synaptobrevin family protein similar to... 47 8e-06
At4g32150.1 68417.m04573 synaptobrevin family protein similar to... 43 9e-05
At2g25340.1 68415.m03031 synaptobrevin family protein similar to... 42 3e-04
At4g15780.1 68417.m02402 synaptobrevin-related family protein si... 39 0.002
At2g32670.1 68415.m03994 synaptobrevin family protein similar to... 38 0.003
At5g11150.1 68418.m01303 synaptobrevin / vesicle-associated memb... 37 0.006
At2g33120.1 68415.m04060 synaptobrevin-related protein / vesicl... 37 0.006
At1g04750.1 68414.m00470 synaptobrevin family protein similar to... 36 0.011
At2g33110.1 68415.m04059 synaptobrevin family protein similar to... 36 0.014
At1g04760.1 68414.m00472 synaptobrevin family protein similar to... 35 0.033
At5g25590.1 68418.m03045 expressed protein contains Pfam profile... 32 0.23
At3g03750.2 68416.m00381 SET domain-containing protein low simil... 31 0.54
At3g03750.1 68416.m00380 SET domain-containing protein low simil... 31 0.54
At5g58180.1 68418.m07282 SNARE protein-related similar to SNARE ... 30 0.71
At4g20060.1 68417.m02935 expressed protein ; expression support... 27 5.0
>At1g11890.1 68414.m01371 vesicle transport protein SEC22, putative
identified as SEC22 by Raikhel, NV, et al. in Plant
Physiol. 124: 1558-69 (2000); similar to vesicle
trafficking protein gb|U91538 from Mus musculus; ESTs
gb|F15494 and gb|F14097 come from this gene
Length = 218
Score = 125 bits (301), Expect = 2e-29
Identities = 58/120 (48%), Positives = 79/120 (65%), Gaps = 2/120 (1%)
Frame = +2
Query: 131 MVLMTMIARVVDGLPLAATMQEDEQSGCNVLEYQNQAKMLFRKL--GPQSPMRCSIETGP 304
MV MT+IARV DGLPLA + + + + Y+ Q K LF+ L G R S+ETGP
Sbjct: 1 MVKMTLIARVTDGLPLAEGLDDGRDLPDSDM-YKQQVKALFKNLSRGQNDASRMSVETGP 59
Query: 305 YLFHYLIENEICYLVLCERNYSKRLAFSYLEEIAQEFYQQYGKRVNTVTRPYTFIEFDTW 484
Y+FHY+IE +CYL +C+R+Y K+LAF YLE++ EF + G + T RPY FI+FDT+
Sbjct: 60 YVFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGPNIETAARPYAFIKFDTF 119
>At5g52270.1 68418.m06487 vesicle transport protein-related similar
to vesicle trafficking protein sec22b [Mus musculus]
GI:1907386
Length = 214
Score = 75.8 bits (178), Expect = 1e-14
Identities = 38/119 (31%), Positives = 72/119 (60%), Gaps = 4/119 (3%)
Frame = +2
Query: 131 MVLMTMIARVVDGLPLAATMQE-DEQSGCNVLEYQNQAKMLFRKLGPQSPM--RCSIETG 301
MV +T++ RV DGLPLA +++ + L Y+ QA+ L +++ S + + +I
Sbjct: 1 MVKLTIVGRVEDGLPLAQDQTYVNQEDNTSFLLYKQQAEFLLKQVSKDSLLHPKMTILLD 60
Query: 302 PYLFHYLIENEICYLVLCERNYSKRLAFSYLEEIAQEFYQQYGKR-VNTVTRPYTFIEF 475
+ FH+L+E +ICY+ L + +Y ++L F+YL+ + +E + K + +++PY+FI F
Sbjct: 61 HHSFHFLVEKKICYIALSDSSYPRKLLFNYLQNLNKELDKLDEKALIQKISKPYSFIRF 119
>At5g22360.1 68418.m02609 synaptobrevin family protein similar to
Synaptobrevin-like protein 1 (SP:P51809) [Homo sapiens]
Length = 221
Score = 46.8 bits (106), Expect = 8e-06
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +2
Query: 242 KMLFRKLGPQ-SPMRCSIETGPYLFHYLIENEICYLVLCERNYSKRLAFSYLEEIAQEFY 418
+ + KL P+ S R Y+FH L + + +L + + +R+ FSYLEEI F
Sbjct: 30 RRILEKLSPEISDERLCFSQDRYIFHILRSDGLTFLCMANDTFGRRVPFSYLEEIHMRFM 89
Query: 419 QQYGK 433
+ YGK
Sbjct: 90 KNYGK 94
>At4g32150.1 68417.m04573 synaptobrevin family protein similar to
Synaptobrevin-like protein 1 (SP:P51809) [Homo sapiens]
Length = 219
Score = 43.2 bits (97), Expect = 9e-05
Identities = 20/69 (28%), Positives = 35/69 (50%)
Frame = +2
Query: 239 AKMLFRKLGPQSPMRCSIETGPYLFHYLIENEICYLVLCERNYSKRLAFSYLEEIAQEFY 418
AK + K+ + S Y+FH + + L + E +R+ F++LE+I Q F
Sbjct: 29 AKQILEKVPGDNDSNVSYSQDRYVFHVKRTDGLTVLCMAEETAGRRIPFAFLEDIHQRFV 88
Query: 419 QQYGKRVNT 445
+ YG+ V+T
Sbjct: 89 RTYGRAVHT 97
>At2g25340.1 68415.m03031 synaptobrevin family protein similar to
Synaptobrevin-like protein 1 (SP:P51809) [Homo sapiens]
Length = 219
Score = 41.5 bits (93), Expect = 3e-04
Identities = 18/69 (26%), Positives = 35/69 (50%)
Frame = +2
Query: 239 AKMLFRKLGPQSPMRCSIETGPYLFHYLIENEICYLVLCERNYSKRLAFSYLEEIAQEFY 418
AK + K+ S Y+FH + + L + + + +R+ FS+LE+I Q F
Sbjct: 29 AKQILEKIPGNGDSHVSYSQDRYVFHVKRTDGLTVLCMADEDAGRRIPFSFLEDIHQRFV 88
Query: 419 QQYGKRVNT 445
+ YG+ +++
Sbjct: 89 RTYGRAIHS 97
>At4g15780.1 68417.m02402 synaptobrevin-related family protein
similar to Vesicle-associated membrane protein 722
(AtVAMP722) Synaptobrevin-related protein 1 (SP:P47192)
{Arabidopsis thaliana}
Length = 194
Score = 38.7 bits (86), Expect = 0.002
Identities = 16/64 (25%), Positives = 36/64 (56%)
Frame = +2
Query: 239 AKMLFRKLGPQSPMRCSIETGPYLFHYLIENEICYLVLCERNYSKRLAFSYLEEIAQEFY 418
A +KL S + + + F++L+E+ Y V+ + + SK+++ ++LE + +F
Sbjct: 32 AAQCLQKLPSSSNSKFTYNCDHHTFNFLVEDAYAYCVVAKDSLSKQISIAFLERVKADFK 91
Query: 419 QQYG 430
++YG
Sbjct: 92 KRYG 95
>At2g32670.1 68415.m03994 synaptobrevin family protein similar to
vesicle-associated membrane protein 7 [Rattus
norvegicus] GI:9502258, SP|P51809 Synaptobrevin-like
protein 1 {Homo sapiens}; contains Pfam profile PF00957:
Synaptobrevin
Length = 285
Score = 38.3 bits (85), Expect = 0.003
Identities = 17/64 (26%), Positives = 35/64 (54%)
Frame = +2
Query: 239 AKMLFRKLGPQSPMRCSIETGPYLFHYLIENEICYLVLCERNYSKRLAFSYLEEIAQEFY 418
A +KL P S + + + F+YL+EN Y V+ + +++ ++LE + ++F
Sbjct: 97 AAQCLQKL-PSSNNKFTYNCDGHTFNYLVENGFTYCVVAVESVGRQIPMAFLERVKEDFN 155
Query: 419 QQYG 430
++YG
Sbjct: 156 KRYG 159
>At5g11150.1 68418.m01303 synaptobrevin / vesicle-associated
membrane protein 713 (VAMP713) identified as AtVAMP713
by Sanderfoot, A.A., et al. in Plant Physiol. 124:
1558-69 (2000); similar to Vesicle-associated membrane
protein 722 (AtVAMP722) Synaptobrevin-related protein 1
(SP:P47192) {Arabidopsis thaliana}; synaptobrevin-like
protein Sybl1, Mus musculus, EMBL:MMU133536
Length = 221
Score = 37.1 bits (82), Expect = 0.006
Identities = 17/70 (24%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +2
Query: 239 AKMLFRKL-GPQSPMRCSIETGPYLFHYLIENEICYLVLCERNYSKRLAFSYLEEIAQEF 415
+K + KL G S S Y+FH + + L + + + + F++L++I Q F
Sbjct: 29 SKQILEKLPGNDSDSHMSYSQDRYIFHVKRTDGLTVLCMADETAGRNIPFAFLDDIHQRF 88
Query: 416 YQQYGKRVNT 445
+ YG+ +++
Sbjct: 89 VKTYGRAIHS 98
>At2g33120.1 68415.m04060 synaptobrevin-related protein /
vesicle-associated membrane protein 722 (VAMP722) (SAR1)
identical to r to Vesicle-associated membrane protein
722 (AtVAMP722) Synaptobrevin-related protein 1
(SP:P47192) {Arabidopsis thaliana}; identical to cDNA
synaptobrevin-related protein (SAR1) GI:600709
Length = 221
Score = 37.1 bits (82), Expect = 0.006
Identities = 17/64 (26%), Positives = 35/64 (54%)
Frame = +2
Query: 239 AKMLFRKLGPQSPMRCSIETGPYLFHYLIENEICYLVLCERNYSKRLAFSYLEEIAQEFY 418
A +KL P S + + + F+YL+EN Y V+ + +++ ++LE + ++F
Sbjct: 32 AAQCLQKL-PSSNNKFTYNCDGHTFNYLVENGFTYCVVAVDSAGRQIPMAFLERVKEDFN 90
Query: 419 QQYG 430
++YG
Sbjct: 91 KRYG 94
>At1g04750.1 68414.m00470 synaptobrevin family protein similar to
Vesicle-associated membrane protein 722 (AtVAMP722)
Synaptobrevin-related protein 1 (SP:P47192) {Arabidopsis
thaliana};
Length = 219
Score = 36.3 bits (80), Expect = 0.011
Identities = 17/64 (26%), Positives = 35/64 (54%)
Frame = +2
Query: 239 AKMLFRKLGPQSPMRCSIETGPYLFHYLIENEICYLVLCERNYSKRLAFSYLEEIAQEFY 418
A +KL P S + + + F+YL+E+ Y V+ + +++ S+LE + ++F
Sbjct: 32 AAQCLQKL-PSSNNKFTYNCDGHTFNYLVEDGFTYCVVAVDSAGRQIPMSFLERVKEDFN 90
Query: 419 QQYG 430
++YG
Sbjct: 91 KRYG 94
>At2g33110.1 68415.m04059 synaptobrevin family protein similar to
Vesicle-associated membrane protein 722 (AtVAMP722)
Synaptobrevin-related protein 1 (SP:P47192) {Arabidopsis
thaliana}
Length = 217
Score = 35.9 bits (79), Expect = 0.014
Identities = 14/55 (25%), Positives = 30/55 (54%)
Frame = +2
Query: 266 PQSPMRCSIETGPYLFHYLIENEICYLVLCERNYSKRLAFSYLEEIAQEFYQQYG 430
P S + + + F+ L+EN Y V+ + + + ++LE + ++FY++YG
Sbjct: 40 PSSNNKFTYNCDGHTFNDLVENGFTYCVVAVDSAGREIPMAFLERVKEDFYKRYG 94
>At1g04760.1 68414.m00472 synaptobrevin family protein similar to
Vesicle-associated membrane protein 722 (AtVAMP722)
Synaptobrevin-related protein 1 (SP:P47192) {Arabidopsis
thaliana}
Length = 220
Score = 34.7 bits (76), Expect = 0.033
Identities = 16/68 (23%), Positives = 36/68 (52%)
Frame = +2
Query: 227 YQNQAKMLFRKLGPQSPMRCSIETGPYLFHYLIENEICYLVLCERNYSKRLAFSYLEEIA 406
+ + A +KL P S + + + F+YL +N Y V+ + +++ ++LE +
Sbjct: 28 FTSVAAQCLQKL-PSSNNKFTYNCDGHTFNYLADNGFTYCVVVIESAGRQIPMAFLERVK 86
Query: 407 QEFYQQYG 430
++F ++YG
Sbjct: 87 EDFNKRYG 94
>At5g25590.1 68418.m03045 expressed protein contains Pfam profile
PF04783: Protein of unknown function (DUF630)
Length = 775
Score = 31.9 bits (69), Expect = 0.23
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = -1
Query: 259 FSKQHFSLILILQNITAALLVFLHGRSQRQAVDD 158
F+ HF+ + L+N AAL + HG S ++A+DD
Sbjct: 34 FAAGHFAYAIALKNTGAALSDYGHGESDQKALDD 67
>At3g03750.2 68416.m00381 SET domain-containing protein low
similarity to G9a [Homo sapiens] GI:287865; contains
Pfam profiles PF00856: SET domain, PF05033: Pre-SET
motif
Length = 354
Score = 30.7 bits (66), Expect = 0.54
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +2
Query: 320 LIENEICYLVLCERNYSKRLAFSYLEEIAQE 412
L++ C CE Y K LAF+ +EEIA E
Sbjct: 139 LVDESGCECERCEEGYCKCLAFAGMEEIANE 169
>At3g03750.1 68416.m00380 SET domain-containing protein low
similarity to G9a [Homo sapiens] GI:287865; contains
Pfam profiles PF00856: SET domain, PF05033: Pre-SET
motif
Length = 338
Score = 30.7 bits (66), Expect = 0.54
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +2
Query: 320 LIENEICYLVLCERNYSKRLAFSYLEEIAQE 412
L++ C CE Y K LAF+ +EEIA E
Sbjct: 139 LVDESGCECERCEEGYCKCLAFAGMEEIANE 169
>At5g58180.1 68418.m07282 SNARE protein-related similar to SNARE
protein Ykt6 [Homo sapiens] GI:2507637
Length = 199
Score = 30.3 bits (65), Expect = 0.71
Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +2
Query: 281 RCSIETGPYLFHYLIENEICYLVLCERNYSKRLAFSYLEEIAQEFYQQYGK--RVNTVTR 454
R S++ Y H N +C + + +Y R AFS L ++ + + YG R ++
Sbjct: 60 RQSVKHEEYKVHAYNINGLCAVGFMDDHYPVRSAFSLLNQVLDVYQKDYGDTWRFENSSQ 119
Query: 455 PYTFIE 472
P+ +++
Sbjct: 120 PWPYLK 125
>At4g20060.1 68417.m02935 expressed protein ; expression supported
by MPSS
Length = 1134
Score = 27.5 bits (58), Expect = 5.0
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = -2
Query: 72 EFLLNLHRFFLLIISKLENSDDL 4
EFL ++H+F ++ + LE D+L
Sbjct: 503 EFLASIHKFLIVFLENLEGDDNL 525
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,024,041
Number of Sequences: 28952
Number of extensions: 193736
Number of successful extensions: 423
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 411
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 421
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 829097472
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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