Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_O09
(544 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80455-4|AAY55873.2| 315|Caenorhabditis elegans Hypothetical pr... 28 3.8
AL031633-16|CAA21028.1| 374|Caenorhabditis elegans Hypothetical... 28 3.8
AF022970-1|AAB69895.1| 142|Caenorhabditis elegans Hypothetical ... 28 3.8
AF016678-7|AAB66154.3| 340|Caenorhabditis elegans Serpentine re... 28 3.8
Z81132-9|CAB03438.1| 320|Caenorhabditis elegans Hypothetical pr... 28 5.0
U58746-2|AAB00622.2| 283|Caenorhabditis elegans Hypothetical pr... 27 6.6
Z99278-8|CAE18037.1| 133|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z82057-4|CAB61024.2| 370|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z81119-10|CAB61032.2| 370|Caenorhabditis elegans Hypothetical p... 27 8.7
L39925-1|AAA98782.1| 370|Caenorhabditis elegans cathepsin B-lik... 27 8.7
L39890-1|AAA98788.1| 370|Caenorhabditis elegans cathepsin B-lik... 27 8.7
>U80455-4|AAY55873.2| 315|Caenorhabditis elegans Hypothetical
protein T01D1.7 protein.
Length = 315
Score = 28.3 bits (60), Expect = 3.8
Identities = 22/99 (22%), Positives = 47/99 (47%), Gaps = 3/99 (3%)
Frame = +2
Query: 140 VANGTGSYTNNL*HVTIWKDFLMDLVKSVNLVVTS*TKATILDTCIITVYHIQLDLIIST 319
VANG +YTNN + + + + ++ + L+ S +T Y +++ + S
Sbjct: 144 VANGKWAYTNNNLTLVLQRSIAISIIGTYELIGIS--------MSFLTAYRLKMYGMRSK 195
Query: 320 SIIQSIWVN---LKK*RITKDVYVMELKMVISLTALVIM 427
+ WV+ +K R ++V L +++ + A++IM
Sbjct: 196 KNEKVSWVSVLEMKVSRFQNLIFVTSLHILVDIVAMLIM 234
>AL031633-16|CAA21028.1| 374|Caenorhabditis elegans Hypothetical
protein Y39A1A.16 protein.
Length = 374
Score = 28.3 bits (60), Expect = 3.8
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -1
Query: 400 NHFQFHHVDVFRNPLFFQ 347
NHF++H +D F PLF+Q
Sbjct: 70 NHFEYH-IDKFHQPLFYQ 86
>AF022970-1|AAB69895.1| 142|Caenorhabditis elegans Hypothetical
protein F13A2.1 protein.
Length = 142
Score = 28.3 bits (60), Expect = 3.8
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 271 MYHNGIPYPVRPNHFHL-DHPEYLGELEKIKDYERRLRDGIEN 396
M NG P+P HFH+ D + L ELE +D E R + +N
Sbjct: 29 MVLNGTPFPDILRHFHVSDFSKELAELEIKQDAEFRKKSLWQN 71
>AF016678-7|AAB66154.3| 340|Caenorhabditis elegans Serpentine
receptor, class i protein45 protein.
Length = 340
Score = 28.3 bits (60), Expect = 3.8
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +1
Query: 268 YMYHNGIPYPVRPNHFHLDHPEYLGELEKIKDY 366
+ YH GI + P +L +PE+ E +K++
Sbjct: 165 FWYHAGIAEDLLPGFVNLTYPEFKAEFSNLKNF 197
>Z81132-9|CAB03438.1| 320|Caenorhabditis elegans Hypothetical
protein T26E4.11 protein.
Length = 320
Score = 27.9 bits (59), Expect = 5.0
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -2
Query: 294 IWYTVMIHVSKIVAFVYDVTTKFTDFTKS 208
+W V + + + V Y + TK DFT S
Sbjct: 99 VWLAVSLAILRAVVIKYPINTKIQDFTSS 127
>U58746-2|AAB00622.2| 283|Caenorhabditis elegans Hypothetical
protein R05G6.7 protein.
Length = 283
Score = 27.5 bits (58), Expect = 6.6
Identities = 8/21 (38%), Positives = 17/21 (80%)
Frame = +1
Query: 211 FGEIGELSGNVVNEGYNFGYM 273
F ++G+ + ++ N+GYNFG++
Sbjct: 6 FADLGKSAKDLFNKGYNFGFL 26
>Z99278-8|CAE18037.1| 133|Caenorhabditis elegans Hypothetical
protein Y53C12B.7 protein.
Length = 133
Score = 27.1 bits (57), Expect = 8.7
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +1
Query: 220 IGELSGNVVNEGYNFGYMYHNGIPYPVRPNHFH 318
IG G + + ++ NG+P P+ P H H
Sbjct: 56 IGSFRGQPIKTRQHHAFIDDNGVPIPLLPYHEH 88
>Z82057-4|CAB61024.2| 370|Caenorhabditis elegans Hypothetical
protein T10H4.12 protein.
Length = 370
Score = 27.1 bits (57), Expect = 8.7
Identities = 23/87 (26%), Positives = 36/87 (41%), Gaps = 5/87 (5%)
Frame = +1
Query: 1 VWHYHCQSASMSYYLHDYSLNAHYYYHHLTYNKWLGGDVVPLL--KERRGEWYWFVHKQL 174
++HY AS Y Y + Y H T K +GG V ++ G YW +
Sbjct: 249 IYHYGPVEASYKVYEDFYHYKSGVY--HYTSGKLVGGHAVKIIGWGVENGVDYWLIANSW 306
Query: 175 VTRYYME---RLSNGFGEIGELSGNVV 246
T + + ++ G E ++ GNVV
Sbjct: 307 GTSFGEKGFFKIRRGTNEC-QIEGNVV 332
>Z81119-10|CAB61032.2| 370|Caenorhabditis elegans Hypothetical
protein T10H4.12 protein.
Length = 370
Score = 27.1 bits (57), Expect = 8.7
Identities = 23/87 (26%), Positives = 36/87 (41%), Gaps = 5/87 (5%)
Frame = +1
Query: 1 VWHYHCQSASMSYYLHDYSLNAHYYYHHLTYNKWLGGDVVPLL--KERRGEWYWFVHKQL 174
++HY AS Y Y + Y H T K +GG V ++ G YW +
Sbjct: 249 IYHYGPVEASYKVYEDFYHYKSGVY--HYTSGKLVGGHAVKIIGWGVENGVDYWLIANSW 306
Query: 175 VTRYYME---RLSNGFGEIGELSGNVV 246
T + + ++ G E ++ GNVV
Sbjct: 307 GTSFGEKGFFKIRRGTNEC-QIEGNVV 332
>L39925-1|AAA98782.1| 370|Caenorhabditis elegans cathepsin B-like
cysteine proteinaseprotein.
Length = 370
Score = 27.1 bits (57), Expect = 8.7
Identities = 23/87 (26%), Positives = 36/87 (41%), Gaps = 5/87 (5%)
Frame = +1
Query: 1 VWHYHCQSASMSYYLHDYSLNAHYYYHHLTYNKWLGGDVVPLL--KERRGEWYWFVHKQL 174
++HY AS Y Y + Y H T K +GG V ++ G YW +
Sbjct: 249 IYHYGPVEASYKVYEDFYHYKSGVY--HYTSGKLVGGHAVKIIGWGVENGVDYWLIANSW 306
Query: 175 VTRYYME---RLSNGFGEIGELSGNVV 246
T + + ++ G E ++ GNVV
Sbjct: 307 GTSFGEKGFFKIRRGTNEC-QIEGNVV 332
>L39890-1|AAA98788.1| 370|Caenorhabditis elegans cathepsin B-like
cysteine proteinaseprotein.
Length = 370
Score = 27.1 bits (57), Expect = 8.7
Identities = 23/87 (26%), Positives = 36/87 (41%), Gaps = 5/87 (5%)
Frame = +1
Query: 1 VWHYHCQSASMSYYLHDYSLNAHYYYHHLTYNKWLGGDVVPLL--KERRGEWYWFVHKQL 174
++HY AS Y Y + Y H T K +GG V ++ G YW +
Sbjct: 249 IYHYGPVEASYKVYEDFYHYKSGVY--HYTSGKLVGGHAVKIIGWGVENGVDYWLIANSW 306
Query: 175 VTRYYME---RLSNGFGEIGELSGNVV 246
T + + ++ G E ++ GNVV
Sbjct: 307 GTSFGEKGFFKIRRGTNEC-QIEGNVV 332
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,423,442
Number of Sequences: 27780
Number of extensions: 272811
Number of successful extensions: 904
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 904
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1091917214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -