Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_O06
(510 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 25 0.34
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 23 2.4
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 23 2.4
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 22 4.2
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 21 7.4
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 21 7.4
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 21 7.4
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 21 7.4
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 7.4
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 21 7.4
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 21 7.4
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 21 9.8
AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein. 21 9.8
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 25.4 bits (53), Expect = 0.34
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 179 YYTPERNPKEADYTAPIYAPQN 244
Y+ E++PK+ T P APQN
Sbjct: 302 YFRAEKDPKKMPCTQPPSAPQN 323
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 22.6 bits (46), Expect = 2.4
Identities = 7/20 (35%), Positives = 15/20 (75%)
Frame = +2
Query: 275 INYWIQNGAPTHKLVLGIST 334
+++WI + A + ++ LGI+T
Sbjct: 261 VSFWINHEATSARVALGITT 280
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 22.6 bits (46), Expect = 2.4
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3
Query: 369 EISGVPPIHAD*GGEACSYYKGPRL 443
+++ PP D GE YY G RL
Sbjct: 994 KVTWKPPPREDWNGEILGYYVGYRL 1018
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 21.8 bits (44), Expect = 4.2
Identities = 11/32 (34%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = +2
Query: 275 INYWIQNGAPTHKLVLGIST--TGRTWKLESK 364
+++WI A + ++ LGI+T T T L+S+
Sbjct: 264 VSFWIHREATSDRVGLGITTVLTLSTISLDSR 295
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 21.0 bits (42), Expect = 7.4
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = +2
Query: 275 INYWIQNGAPTHKLVLGISTTGRTWKLESK 364
+++W+ A ++VLG +T L SK
Sbjct: 251 VSFWLHMDASPPRIVLGTNTILTFMTLASK 280
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.0 bits (42), Expect = 7.4
Identities = 5/20 (25%), Positives = 13/20 (65%)
Frame = +2
Query: 275 INYWIQNGAPTHKLVLGIST 334
+++W+ A ++ LG++T
Sbjct: 240 VSFWLNRNATPARVALGVTT 259
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.0 bits (42), Expect = 7.4
Identities = 5/20 (25%), Positives = 13/20 (65%)
Frame = +2
Query: 275 INYWIQNGAPTHKLVLGIST 334
+++W+ A ++ LG++T
Sbjct: 240 VSFWLNRNATPARVALGVTT 259
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 21.0 bits (42), Expect = 7.4
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 72 ICS*LSAFCQT*IAPFTLTS 131
IC+ L+A CQ + F +TS
Sbjct: 644 ICTKLTADCQPGVTAFIVTS 663
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.0 bits (42), Expect = 7.4
Identities = 17/75 (22%), Positives = 30/75 (40%), Gaps = 8/75 (10%)
Frame = +2
Query: 2 ESEHREGFTALVREMKQALNVKPNMQLVISVLPNV-NSSIYFDV--PSIINLV-----DI 157
E +H+ F + + + P ++ SV N++ Y P ++ D+
Sbjct: 279 EQQHKAMFLVVTAQPVHSAYKAPEETIISSVFTTRHNATCYLSHVDPDVVQYFGYLPQDM 338
Query: 158 VNIQAFDYYTPERNP 202
V FD+Y PE P
Sbjct: 339 VGRSLFDFYHPEDLP 353
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 21.0 bits (42), Expect = 7.4
Identities = 5/20 (25%), Positives = 13/20 (65%)
Frame = +2
Query: 275 INYWIQNGAPTHKLVLGIST 334
+++W+ A ++ LG++T
Sbjct: 179 VSFWLNRNATPARVALGVTT 198
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 21.0 bits (42), Expect = 7.4
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = -2
Query: 269 RRRFVEDRGSAVRKSVQCSPPLWGYVQVY 183
R+ + EDR +R+ P + QVY
Sbjct: 14 RQVYGEDRWEEIRRQASVEQPSFSVHQVY 42
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 20.6 bits (41), Expect = 9.8
Identities = 6/20 (30%), Positives = 13/20 (65%)
Frame = +2
Query: 275 INYWIQNGAPTHKLVLGIST 334
+++W+ A ++ LGI+T
Sbjct: 233 VSFWLNREATADRVSLGITT 252
>AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein.
Length = 238
Score = 20.6 bits (41), Expect = 9.8
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +2
Query: 152 DIVNIQAFDYYTPERNP 202
D+V FD+Y PE P
Sbjct: 43 DMVGRSLFDFYHPEDLP 59
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,788
Number of Sequences: 438
Number of extensions: 3119
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14109465
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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