Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_O06
(510 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g19810.1 68417.m02905 glycosyl hydrolase family 18 protein si... 56 1e-08
At4g19730.1 68417.m02897 glycosyl hydrolase family 18 protein si... 55 3e-08
At4g19820.1 68417.m02906 glycosyl hydrolase family 18 protein si... 51 5e-07
At4g19750.1 68417.m02899 glycosyl hydrolase family 18 protein si... 51 5e-07
At4g19770.1 68417.m02901 glycosyl hydrolase family 18 protein si... 46 2e-05
At4g19760.1 68417.m02900 glycosyl hydrolase family 18 protein si... 45 3e-05
At4g19800.1 68417.m02904 glycosyl hydrolase family 18 protein si... 43 1e-04
At4g19740.1 68417.m02898 glycosyl hydrolase family 18 protein si... 42 2e-04
At4g19720.1 68417.m02896 glycosyl hydrolase family 18 protein si... 42 2e-04
At5g42390.1 68418.m05161 metalloendopeptidase identical to chlor... 29 2.4
At1g30220.1 68414.m03697 sugar transporter family protein simila... 29 2.4
At3g26610.1 68416.m03322 polygalacturonase, putative / pectinase... 28 4.2
At4g02680.1 68417.m00363 tetratricopeptide repeat (TPR)-containi... 27 5.5
At1g50790.1 68414.m05712 hypothetical protein 27 5.5
At4g39420.1 68417.m05579 expressed protein ; expression support... 27 7.3
At2g33570.1 68415.m04114 expressed protein 27 7.3
>At4g19810.1 68417.m02905 glycosyl hydrolase family 18 protein
similar to chitinase/lysozyme GI:467689 from [Nicotiana
tabacum]
Length = 379
Score = 56.4 bits (130), Expect = 1e-08
Identities = 37/115 (32%), Positives = 58/115 (50%), Gaps = 1/115 (0%)
Frame = +2
Query: 14 REGFTALVREMKQALNVKPNMQLVISVLPNVNS-SIYFDVPSIINLVDIVNIQAFDYYTP 190
RE +A+V E + KP + L +V + N S+ + V ++ + +D VN+ A+D+Y P
Sbjct: 156 REWRSAVVAEASSS--GKPRLLLAAAVFYSNNYYSVLYPVSAVASSLDWVNLMAYDFYGP 213
Query: 191 ERNPKEADYTAPIYAPQNRDPLQNADAAINYWIQNGAPTHKLVLGISTTGRTWKL 355
+ + A ++ P N P + DA WIQ G P K VLG G W+L
Sbjct: 214 GWS-RVTGPPAALFDPSNAGP--SGDAGTRSWIQAGLPAKKAVLGFPYYGYAWRL 265
>At4g19730.1 68417.m02897 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:505267 from [Nicotiana
tabacum]
Length = 332
Score = 54.8 bits (126), Expect = 3e-08
Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 1/110 (0%)
Frame = +2
Query: 41 EMKQALNVKPNMQLVISVL-PNVNSSIYFDVPSIINLVDIVNIQAFDYYTPERNPKEADY 217
E + + KP + L +V +V + + V + +D VNI A+D+Y P + K
Sbjct: 154 EAESRRSSKPTLLLTAAVYYSSVYKTFTYPVQVMRESLDWVNIIAYDFYGPVSSSKFTVP 213
Query: 218 TAPIYAPQNRDPLQNADAAINYWIQNGAPTHKLVLGISTTGRTWKLESKR 367
TA ++ N + + D+ + WI++G P K VLG S G W L++ +
Sbjct: 214 TAGLHVSSNNEG-PSGDSGLKQWIKDGLPEKKAVLGFSYVGWAWTLQNDK 262
>At4g19820.1 68417.m02906 glycosyl hydrolase family 18 protein
similar to chitinase/lysozyme GI:467689 from [Nicotiana
tabacum]
Length = 366
Score = 50.8 bits (116), Expect = 5e-07
Identities = 37/132 (28%), Positives = 64/132 (48%), Gaps = 8/132 (6%)
Frame = +2
Query: 17 EGFTALVREMKQALNV------KPNMQLVISVLPNVNS-SIYFDVPSIINLVDIVNIQAF 175
+ F L+RE + A+ KP + L +V + + S+ V ++ + +D VN+ A+
Sbjct: 147 DNFGKLLREWRLAVEAEARSSGKPRLLLTAAVFYSYSYYSVLHPVNAVADSLDWVNLVAY 206
Query: 176 DYYTPERNPKEADYTAPIYAPQNRDPLQNADAAINYWIQNGAPTHKLVLGISTTGRTWKL 355
D+Y + + AP+Y P P + DA + W Q G P K VLG G W L
Sbjct: 207 DFYE-SGSSRVTCSPAPLYDPITTGP--SGDAGVRAWTQAGLPAKKAVLGFPLYGYAWCL 263
Query: 356 -ESKR*NFRSST 388
++K N+ +++
Sbjct: 264 TDAKNHNYYANS 275
>At4g19750.1 68417.m02899 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 362
Score = 50.8 bits (116), Expect = 5e-07
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Frame = +2
Query: 122 FDVPSIINLVDIVNIQAFDYYTPERNPKEADYTAPIYAPQNRDPLQNADAAINYWIQNGA 301
+ V +I + +D VNI A+D+Y P +P A ++ P N ++ D+ ++ W++
Sbjct: 179 YPVQAIADNLDFVNIMAYDFYGPGWSPVTGP-PAALFDPSNPAG-RSGDSGLSKWLEAKL 236
Query: 302 PTHKLVLGISTTGRTWKLESKR*N-FRSSTD 391
P K VLG S G W LE N + ++TD
Sbjct: 237 PAKKAVLGFSYCGWAWTLEDAENNGYDAATD 267
>At4g19770.1 68417.m02901 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 261
Score = 45.6 bits (103), Expect = 2e-05
Identities = 29/85 (34%), Positives = 39/85 (45%)
Frame = +2
Query: 101 NVNSSIYFDVPSIINLVDIVNIQAFDYYTPERNPKEADYTAPIYAPQNRDPLQNADAAIN 280
N N +Y V I L+D VNI+A+D+Y P + T P A + + D+ +
Sbjct: 77 NYNGVVY-PVKFISELLDWVNIKAYDFY----GPGCTEVTGPPAALYLQSDGPSGDSGVK 131
Query: 281 YWIQNGAPTHKLVLGISTTGRTWKL 355
WI G P K VLG G W L
Sbjct: 132 DWIDAGLPAEKAVLGFPYYGWAWTL 156
>At4g19760.1 68417.m02900 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:505267 from [Nicotiana
tabacum]
Length = 365
Score = 44.8 bits (101), Expect = 3e-05
Identities = 33/127 (25%), Positives = 53/127 (41%), Gaps = 2/127 (1%)
Frame = +2
Query: 17 EGFTALVREMKQALNVKPNMQLVISVLPNVNSSIYFDVPSIINLVDIVNIQAFDYYTPER 196
E + A V E N P + + + V +I + +D VNI A+D+Y P
Sbjct: 152 EEWRAAVVEESDKTNQLPLLLTAAVYYSPQYDGVEYPVKAIADNLDFVNIMAYDFYGPGW 211
Query: 197 NPKEADYTAPIYAPQNRDPLQNADAAINYWIQNG-APTHKLVLGISTTGRTWKLESKR*N 373
+P A + P N ++ ++ + W+ P K VLG G W LE N
Sbjct: 212 SPVTGPPAALFHDPSN-PAGRSGNSGLRKWLDEAKLPPKKAVLGFPYCGWAWTLEDAENN 270
Query: 374 -FRSSTD 391
+ ++TD
Sbjct: 271 GYDAATD 277
>At4g19800.1 68417.m02904 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 398
Score = 42.7 bits (96), Expect = 1e-04
Identities = 33/123 (26%), Positives = 54/123 (43%), Gaps = 7/123 (5%)
Frame = +2
Query: 8 EHREGFTALVREMKQALNVKPNMQLVISVLPNVN---SSIYFDVP----SIINLVDIVNI 166
E F L+ E + A+ + N +++ SS Y VP +I N +D +N+
Sbjct: 125 EEMYDFGKLLEEWRSAVEAESNSSGTTALILTAAVYYSSNYQGVPYPVLAISNSLDWINL 184
Query: 167 QAFDYYTPERNPKEADYTAPIYAPQNRDPLQNADAAINYWIQNGAPTHKLVLGISTTGRT 346
A+D+Y P + A +Y P + ++ D+ + W + G P K VLG G
Sbjct: 185 MAYDFYGPGWSTVTGP-PASLYLPTDG---RSGDSGVRDWTEAGLPAKKAVLGFPYYGWA 240
Query: 347 WKL 355
W L
Sbjct: 241 WTL 243
>At4g19740.1 68417.m02898 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 289
Score = 42.3 bits (95), Expect = 2e-04
Identities = 27/108 (25%), Positives = 49/108 (45%), Gaps = 2/108 (1%)
Frame = +2
Query: 50 QALNVKPNMQLVISVLPNVNSSIYFDVPSIINLVDIVNIQAFDYY--TPERNPKEADYTA 223
Q ++P + + +S+ + V +I +D VN+ A+++Y T E P A
Sbjct: 137 QRTGIRPLLLTAAVYYTSDYNSVSYPVQAINRSLDWVNLIAYEFYGLTTEIGPP-----A 191
Query: 224 PIYAPQNRDPLQNADAAINYWIQNGAPTHKLVLGISTTGRTWKLESKR 367
+Y P + P D + +W++ G P K V G G +W L+ +
Sbjct: 192 GLYDPSIKGPC--GDTGLKHWLKAGLPEKKAVFGFPYVGWSWTLDDDK 237
>At4g19720.1 68417.m02896 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 363
Score = 41.9 bits (94), Expect = 2e-04
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Frame = +2
Query: 104 VNSSIYFDVPSIINLVDIVNIQAFDYYTPERNPKEADYTAPIYAPQN-RDPLQNADAAIN 280
V S+ + + I +D VN+ A+D+Y+ A ++ P N + P D +
Sbjct: 174 VYDSVSYPIREIKKKLDWVNLIAYDFYSSSTT---IGPPAALFDPSNPKGPC--GDYGLK 228
Query: 281 YWIQNGAPTHKLVLGISTTGRTWKLES 361
WI+ G P K VLG G TW L S
Sbjct: 229 EWIKAGLPAKKAVLGFPYVGWTWSLGS 255
>At5g42390.1 68418.m05161 metalloendopeptidase identical to
chloroplast processing enzyme metalloendopeptidase
[Arabidopsis thaliana] gi|2827039|gb|AAC39482
Length = 1265
Score = 28.7 bits (61), Expect = 2.4
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = -3
Query: 178 VKCLDVDNVDQVYDAWDVKVNGAIYVWQNADN*LHIGFYIECLF 47
+K DVD + + ++ W N +Y+ + DN I IE +F
Sbjct: 358 IKKWDVDKIRKFHERWYFPANATLYIVGDIDNIPRIVHNIEAVF 401
>At1g30220.1 68414.m03697 sugar transporter family protein similar
to SP|Q96QE2 Proton myo-inositol co-transporter (Hmit)
[Homo sapiens]; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 580
Score = 28.7 bits (61), Expect = 2.4
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +3
Query: 249 ILYKTPTLL*ITGFKMVRLPTNLSLVSAPLDVRGS 353
++Y +PT++ + GF R LSLV+A L+ GS
Sbjct: 294 VMYYSPTIVQLAGFASNRTALLLSLVTAGLNAFGS 328
>At3g26610.1 68416.m03322 polygalacturonase, putative / pectinase,
putative similar to polygalacturonase (PG1) GI:5669846,
(PG2) GI:5669848 [Glycine max]; contains PF00295:
Glycosyl hydrolases family 28 (polygalacturonases)
Length = 470
Score = 27.9 bits (59), Expect = 4.2
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -1
Query: 429 CNKNKLHHPNRRVSVELRKFHRLDSSFHVRPV 334
C+K+K + R VS+ K++ + SF V+PV
Sbjct: 357 CDKSKCKNQTRAVSISGVKYNNIVGSFTVQPV 388
>At4g02680.1 68417.m00363 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515 TPR Domain
Length = 888
Score = 27.5 bits (58), Expect = 5.5
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 8 EHREGFTALVREMKQALNVKPNMQLVISVLPNVNS 112
EH T+ +R+ + AL+V PN Q ++ + VNS
Sbjct: 851 EHIGDVTSALRDCRAALSVDPNHQEMLELHSRVNS 885
>At1g50790.1 68414.m05712 hypothetical protein
Length = 812
Score = 27.5 bits (58), Expect = 5.5
Identities = 15/73 (20%), Positives = 32/73 (43%)
Frame = +2
Query: 68 PNMQLVISVLPNVNSSIYFDVPSIINLVDIVNIQAFDYYTPERNPKEADYTAPIYAPQNR 247
P ++++PN + + I + +V I + ++Y P R + ++ P NR
Sbjct: 339 PEKATWVTLVPNRDDE-FISFARCIMVSQLVGIDSLEHYYPNRVASQFGRLQDVHCPVNR 397
Query: 248 DPLQNADAAINYW 286
+ L A +Y+
Sbjct: 398 NNLSREAAWNDYY 410
>At4g39420.1 68417.m05579 expressed protein ; expression supported
by MPSS
Length = 781
Score = 27.1 bits (57), Expect = 7.3
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -2
Query: 494 RFGGVNKFGANFWVAFN*TWTFVIRTSFTTLIGVYRWNSGNF 369
+FG + N W F + FVI S + LI +Y NSG+F
Sbjct: 364 KFGESSIGPTNEWADFRLSDNFVICLSVSGLIFLYDVNSGDF 405
>At2g33570.1 68415.m04114 expressed protein
Length = 496
Score = 27.1 bits (57), Expect = 7.3
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = -2
Query: 260 FVEDRGSAVRKSVQCSPPLWGYVQVYNSQMPGC 162
++ + G+++R Q P WGY +VY + C
Sbjct: 147 WISNNGTSIRAKAQKILPDWGYGRVYTVVVVNC 179
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,607,002
Number of Sequences: 28952
Number of extensions: 249444
Number of successful extensions: 712
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 703
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 917929344
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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