Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_O05
(547 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF020870-1|AAC31873.1| 692|Anopheles gambiae hexamerin A protein. 108 1e-25
U51225-1|AAA96405.1| 692|Anopheles gambiae hexamerin protein. 107 2e-25
AF020872-1|AAC31875.1| 692|Anopheles gambiae hexamerin A protein. 107 2e-25
AF020871-1|AAC31874.1| 692|Anopheles gambiae hexamerin A protein. 107 2e-25
L76038-1|AAC27383.1| 683|Anopheles gambiae prophenoloxidase pro... 63 5e-12
AF031626-1|AAD01936.1| 683|Anopheles gambiae prophenoloxidase p... 63 5e-12
AF004916-1|AAB94672.1| 686|Anopheles gambiae pro-phenol oxidase... 62 1e-11
AJ010195-1|CAA09034.1| 687|Anopheles gambiae prophenoloxidase p... 61 2e-11
AJ010194-1|CAA09033.1| 684|Anopheles gambiae prophenoloxidase p... 59 8e-11
AJ459961-1|CAD31060.1| 700|Anopheles gambiae prophenoloxidase 8... 58 2e-10
AJ459960-1|CAD31059.1| 696|Anopheles gambiae prophenoloxidase 7... 57 3e-10
AJ010193-1|CAA09032.1| 684|Anopheles gambiae prophenoloxidase p... 55 1e-09
AF004915-1|AAB94671.1| 688|Anopheles gambiae pro-phenol oxidase... 52 2e-08
AJ459962-1|CAD31061.1| 685|Anopheles gambiae prophenoloxidase 9... 50 4e-08
M93689-1|AAA29368.1| 442|Anopheles gambiae protein ( Anopheles ... 25 2.2
DQ974173-1|ABJ52813.1| 553|Anopheles gambiae serpin 16 protein. 23 6.6
DQ230893-2|ABD94312.1| 525|Anopheles gambiae iduronate 2-sulfat... 23 6.6
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign... 23 6.6
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr... 23 8.7
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p... 23 8.7
>AF020870-1|AAC31873.1| 692|Anopheles gambiae hexamerin A protein.
Length = 692
Score = 108 bits (260), Expect = 1e-25
Identities = 55/155 (35%), Positives = 89/155 (57%), Gaps = 3/155 (1%)
Frame = +3
Query: 3 LTYLTEDIGFNSYYYYFHSHLPFWWSSERYGNLKHRRGEIYYNFYQQLTTRYYFERLTNG 182
L Y TEDIG N+YYYYF F +++G +K RRGE+Y+ +Q L RY ER++N
Sbjct: 222 LNYYTEDIGLNAYYYYFMMDYSFLLGGDKFGLIKDRRGELYWYMHQMLLARYNLERMSNY 281
Query: 183 LGSIPEFSWYSPIKTGYYPLMTSYY--FPFAQRPDNYNLHSVKNYEAIRFLDIFEKTFVQ 356
+G++ W P+KTGY+ L+ SY+ PF R NY + S ++Y + +++ +E +
Sbjct: 282 MGTVKPLVWRFPLKTGYFSLL-SYWNGVPFKSRDYNYMI-SDESYYKLDWINAWEAKIRK 339
Query: 357 SLQKGKF-ESYGKKIDFHDEKAINFVGNYWQENAD 458
++ G F + G +I+ +++ F GN N D
Sbjct: 340 IIEDGFFVKEDGTRINLRLPESVEFFGNLLNSNVD 374
>U51225-1|AAA96405.1| 692|Anopheles gambiae hexamerin protein.
Length = 692
Score = 107 bits (258), Expect = 2e-25
Identities = 55/155 (35%), Positives = 89/155 (57%), Gaps = 3/155 (1%)
Frame = +3
Query: 3 LTYLTEDIGFNSYYYYFHSHLPFWWSSERYGNLKHRRGEIYYNFYQQLTTRYYFERLTNG 182
L Y TEDIG N+YYYYF F +++G +K RRGE+Y+ +Q L RY ER++N
Sbjct: 222 LNYNTEDIGLNAYYYYFMMDYSFLLGGDKFGLIKDRRGELYWYMHQMLLARYNLERMSNY 281
Query: 183 LGSIPEFSWYSPIKTGYYPLMTSYY--FPFAQRPDNYNLHSVKNYEAIRFLDIFEKTFVQ 356
+G++ W P+KTGY+ L+ SY+ PF R NY + S ++Y + +++ +E +
Sbjct: 282 MGTVKPLVWRFPLKTGYFSLL-SYWNGVPFKSRDYNYMI-SDESYYKLDWINAWEAKIRK 339
Query: 357 SLQKGKF-ESYGKKIDFHDEKAINFVGNYWQENAD 458
++ G F + G +I+ +++ F GN N D
Sbjct: 340 IIEDGFFVKEDGTRINLRLPESVEFFGNLLNSNVD 374
>AF020872-1|AAC31875.1| 692|Anopheles gambiae hexamerin A protein.
Length = 692
Score = 107 bits (257), Expect = 2e-25
Identities = 55/155 (35%), Positives = 89/155 (57%), Gaps = 3/155 (1%)
Frame = +3
Query: 3 LTYLTEDIGFNSYYYYFHSHLPFWWSSERYGNLKHRRGEIYYNFYQQLTTRYYFERLTNG 182
L Y TEDIG N+YYYYF F +++G +K RRGE+Y+ +Q L RY ER++N
Sbjct: 222 LNYNTEDIGLNAYYYYFMMDYSFLLGGDKFGLIKDRRGELYWYMHQMLLARYNLERMSNY 281
Query: 183 LGSIPEFSWYSPIKTGYYPLMTSYY--FPFAQRPDNYNLHSVKNYEAIRFLDIFEKTFVQ 356
+G++ W P+KTGY+ L+ SY+ PF R NY + S ++Y + +++ +E +
Sbjct: 282 MGTVKPLVWRFPLKTGYFSLL-SYWNGVPFKSRDYNYMI-SDESYFKLDWINAWEAKIRK 339
Query: 357 SLQKGKF-ESYGKKIDFHDEKAINFVGNYWQENAD 458
++ G F + G +I+ +++ F GN N D
Sbjct: 340 IIEDGFFVKEDGTRINLRLPESVEFFGNLLNSNVD 374
>AF020871-1|AAC31874.1| 692|Anopheles gambiae hexamerin A protein.
Length = 692
Score = 107 bits (257), Expect = 2e-25
Identities = 55/155 (35%), Positives = 89/155 (57%), Gaps = 3/155 (1%)
Frame = +3
Query: 3 LTYLTEDIGFNSYYYYFHSHLPFWWSSERYGNLKHRRGEIYYNFYQQLTTRYYFERLTNG 182
L Y TEDIG N+YYYYF F +++G +K RRGE+Y+ +Q L RY ER++N
Sbjct: 222 LNYNTEDIGLNAYYYYFMMDYSFLLGGDKFGLIKDRRGELYWYMHQMLLARYNLERMSNY 281
Query: 183 LGSIPEFSWYSPIKTGYYPLMTSYY--FPFAQRPDNYNLHSVKNYEAIRFLDIFEKTFVQ 356
+G++ W P+KTGY+ L+ SY+ PF R NY + S ++Y + +++ +E +
Sbjct: 282 MGTVKPLVWRFPLKTGYFSLL-SYWNGVPFKSRDYNYMI-SDESYFKLDWINAWEAKIRK 339
Query: 357 SLQKGKF-ESYGKKIDFHDEKAINFVGNYWQENAD 458
++ G F + G +I+ +++ F GN N D
Sbjct: 340 IIEDGFFVKEDGTRINLRLPESVEFFGNLLNSNVD 374
>L76038-1|AAC27383.1| 683|Anopheles gambiae prophenoloxidase
protein.
Length = 683
Score = 63.3 bits (147), Expect = 5e-12
Identities = 45/154 (29%), Positives = 78/154 (50%), Gaps = 9/154 (5%)
Frame = +3
Query: 3 LTYLTEDIGFNSYYYYFHSHLPFWWSSERYGNLKHRRGEIYYNFYQQLTTRYYFERLTNG 182
L Y EDIG N +++++H PF S+ + K RRGE++Y +QQL RY FER +N
Sbjct: 194 LWYFREDIGVNLHHWHWHLVYPFDASNRAIVD-KDRRGELFYYMHQQLVARYNFERFSNR 252
Query: 183 LGSIPEF-SWYSPIKTGYYP----LMTSYYFP---FAQRPDNYNLHSVKNYEAIRFLDIF 338
L + + PI GY+P L+ S +P A + N + + + + L+ +
Sbjct: 253 LQRVKRLNNLREPISEGYFPKLDSLVASRAWPGRVDASVLKDLNREADQIKQDVADLERW 312
Query: 339 EKTFVQSLQKG-KFESYGKKIDFHDEKAINFVGN 437
+++ +G + G +I ++K I+ +GN
Sbjct: 313 IDRIYEAIHQGFVVDESGNRIPLDEQKGIDHLGN 346
>AF031626-1|AAD01936.1| 683|Anopheles gambiae prophenoloxidase
protein.
Length = 683
Score = 63.3 bits (147), Expect = 5e-12
Identities = 45/154 (29%), Positives = 78/154 (50%), Gaps = 9/154 (5%)
Frame = +3
Query: 3 LTYLTEDIGFNSYYYYFHSHLPFWWSSERYGNLKHRRGEIYYNFYQQLTTRYYFERLTNG 182
L Y EDIG N +++++H PF S+ + K RRGE++Y +QQL RY FER +N
Sbjct: 194 LWYFREDIGVNLHHWHWHLVYPFDASNRAIVD-KDRRGELFYYMHQQLVARYNFERFSNR 252
Query: 183 LGSIPEF-SWYSPIKTGYYP----LMTSYYFP---FAQRPDNYNLHSVKNYEAIRFLDIF 338
L + + PI GY+P L+ S +P A + N + + + + L+ +
Sbjct: 253 LQRVKRLNNLREPISEGYFPKLDSLVASRAWPGRVDASVLKDLNREADQIKQDVADLERW 312
Query: 339 EKTFVQSLQKG-KFESYGKKIDFHDEKAINFVGN 437
+++ +G + G +I ++K I+ +GN
Sbjct: 313 IDRIYEAIHQGFVVDESGNRIPLDEQKGIDHLGN 346
>AF004916-1|AAB94672.1| 686|Anopheles gambiae pro-phenol oxidase
subunit 2 protein.
Length = 686
Score = 62.1 bits (144), Expect = 1e-11
Identities = 47/160 (29%), Positives = 75/160 (46%), Gaps = 9/160 (5%)
Frame = +3
Query: 3 LTYLTEDIGFNSYYYYFHSHLPFWWSSERYGNLKHRRGEIYYNFYQQLTTRYYFERLTNG 182
L Y EDIG N +++++H P +R N K RRGE++Y +QQL RY ER N
Sbjct: 195 LAYFREDIGVNLHHWHWHLVYP-GEGPDRVVN-KDRRGELFYYMHQQLIARYNVERFCNR 252
Query: 183 LGSI-PEFSWYSPIKTGYYP--LMTSYYFPFAQRPDNYNLHSVKNY-EAIRF----LDIF 338
L + P + P+ GY+P + + F RP N L + +++ F L+
Sbjct: 253 LARVRPLTNLREPLPEGYFPKIIRSLNNRAFPPRPQNTVLRDINRVDDSVTFTVSDLERS 312
Query: 339 EKTFVQSLQKGKFES-YGKKIDFHDEKAINFVGNYWQENA 455
E +S+ G G +I + I+ +GN + +A
Sbjct: 313 ESRIAESIDGGYVVGPGGNRIPLDERTGIDVLGNIMEPSA 352
>AJ010195-1|CAA09034.1| 687|Anopheles gambiae prophenoloxidase
protein.
Length = 687
Score = 61.3 bits (142), Expect = 2e-11
Identities = 48/164 (29%), Positives = 79/164 (48%), Gaps = 13/164 (7%)
Frame = +3
Query: 3 LTYLTEDIGFNSYYYYFHSHLPFWWSSERYGNL--KHRRGEIYYNFYQQLTTRYYFERLT 176
L Y EDIG N +++++H P E N+ K RRGE++Y +QQL RY +R
Sbjct: 196 LAYFREDIGVNLHHWHWHLVYP----GEGPNNVVNKDRRGELFYYMHQQLIARYNVDRFC 251
Query: 177 NGLGSI-PEFSWYSPIKTGYYP----LMTSYYFPFAQRPDNYNLHSVKNYE-----AIRF 326
N L + P S P+ GY+P +T+ FP RP N L + E +I
Sbjct: 252 NRLSRVRPLTSLREPLPEGYFPKIVRSLTNRGFP--ARPQNTILRDLNRIEDDVVLSITD 309
Query: 327 LDIFEKTFVQSLQKGKFES-YGKKIDFHDEKAINFVGNYWQENA 455
++++ +S+ G + G +I ++ I+ +GN + +A
Sbjct: 310 IELWGSRIAESIDGGYVVAPGGNRIPLDEQTGIDVLGNIIEPSA 353
>AJ010194-1|CAA09033.1| 684|Anopheles gambiae prophenoloxidase
protein.
Length = 684
Score = 59.3 bits (137), Expect = 8e-11
Identities = 45/182 (24%), Positives = 88/182 (48%), Gaps = 9/182 (4%)
Frame = +3
Query: 3 LTYLTEDIGFNSYYYYFHSHLPFWWSSERYGNLKHRRGEIYYNFYQQLTTRYYFERLTNG 182
+ Y EDIG + +++++H P +R K RRGE++Y+ +QQ RY ER NG
Sbjct: 196 VAYWREDIGLSLHHWHWHLVYPAT-GPDRVVR-KDRRGELFYHMHQQTIARYNIERFANG 253
Query: 183 LGSIPEFSWY-SPIKTGYYP--LMTSYYFPFAQRPDNY---NLHSVKNYEAIRF--LDIF 338
L FS I Y+P + +S F+ R N +++ V++ IR +D+
Sbjct: 254 LARTLSFSQLRESIPEAYFPKIVRSSDGRAFSCRYPNQVMKDVNRVEDESTIRLADMDVS 313
Query: 339 EKTFVQSLQKGKFE-SYGKKIDFHDEKAINFVGNYWQENADLYEEEVTKDYQRSYDIVAR 515
K +++ G + + G ++ +EK I+ +G+ + + + DY ++ ++
Sbjct: 314 IKRIFEAIDNGYAQATNGDRVPLDNEKGIDLIGDLLEASTNSINFNYYGDYHQNGHVMLG 373
Query: 516 HV 521
++
Sbjct: 374 YI 375
>AJ459961-1|CAD31060.1| 700|Anopheles gambiae prophenoloxidase 8
protein.
Length = 700
Score = 58.0 bits (134), Expect = 2e-10
Identities = 45/160 (28%), Positives = 73/160 (45%), Gaps = 9/160 (5%)
Frame = +3
Query: 3 LTYLTEDIGFNSYYYYFHSHLPFWWSSERYGNLKHRRGEIYYNFYQQLTTRYYFERLTNG 182
+ + EDIG N +++ H HL + S K RRGE++Y +QQL RY +R G
Sbjct: 210 MAFFREDIGVNLHHW--HWHLVYPASGPPDVVRKDRRGELFYYMHQQLLARYQIDRYAQG 267
Query: 183 LGSI-PEFSWYSPIKTGYYP--LMTSYYFPFAQRPDNYNLHSVKNYE---AIRFLDI--F 338
LG I P + P++ YYP L TS F R + V +R DI +
Sbjct: 268 LGRIEPLANLREPVREAYYPKLLRTSNNRTFCPRYPGMTISDVARSADRLEVRIADIESW 327
Query: 339 EKTFVQSLQKG-KFESYGKKIDFHDEKAINFVGNYWQENA 455
++++ G G ++ + + I+ +GN + +A
Sbjct: 328 LPRVLEAIDAGFAVSDDGVRVPLDETRGIDVLGNILERSA 367
>AJ459960-1|CAD31059.1| 696|Anopheles gambiae prophenoloxidase 7
protein.
Length = 696
Score = 57.2 bits (132), Expect = 3e-10
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Frame = +3
Query: 3 LTYLTEDIGFNSYYYYFHSHLPFWWSSERYGNLKHRRGEIYYNFYQQLTTRYYFERLTNG 182
L Y EDIG N +++++H P ER K RRGE++Y +QQ+ RY ER + G
Sbjct: 209 LAYFREDIGVNLHHWHWHLVYPAE-GPERVVR-KDRRGELFYYMHQQMIARYQVERYSQG 266
Query: 183 LGSI-PEFSWYSPIKTGYYP 239
LG + P + +PI YYP
Sbjct: 267 LGRVTPLDNLRTPIPEPYYP 286
>AJ010193-1|CAA09032.1| 684|Anopheles gambiae prophenoloxidase
protein.
Length = 684
Score = 55.2 bits (127), Expect = 1e-09
Identities = 40/154 (25%), Positives = 73/154 (47%), Gaps = 9/154 (5%)
Frame = +3
Query: 3 LTYLTEDIGFNSYYYYFHSHLPFWWSSERYGNLKHRRGEIYYNFYQQLTTRYYFERLTNG 182
L Y EDIG N +++++H P + K RRGE++Y +QQ RY ER NG
Sbjct: 196 LAYWREDIGVNLHHWHWHLVYPARGPNRIVR--KDRRGELFYYMHQQTMARYNIERFANG 253
Query: 183 LGSIPEF-SWYSPIKTGYYPLMT--SYYFPFAQRPDNYNLHSVKNYE-----AIRFLDIF 338
+ + F ++ I Y+P +T S + R N L +K E +I ++++
Sbjct: 254 MPRVVAFRNFREAIPEAYFPKITRSSDGRSYPARHPNETLSDLKRVEDGVIVSIADMELW 313
Query: 339 EKTFVQSLQKGKFE-SYGKKIDFHDEKAINFVGN 437
+++ G + S +++ ++ I+ +GN
Sbjct: 314 TTRIFEAIDNGFAQSSSNQRVPLDNDSGIDLLGN 347
>AF004915-1|AAB94671.1| 688|Anopheles gambiae pro-phenol oxidase
subunit 1 protein.
Length = 688
Score = 51.6 bits (118), Expect = 2e-08
Identities = 39/154 (25%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
Frame = +3
Query: 3 LTYLTEDIGFNSYYYYFHSHLPFWWSSERYGNLKHRRGEIYYNFYQQLTTRYYFERLTNG 182
+ Y EDIG N +++++H P E K RRGE+++ + QL RY +R
Sbjct: 195 MAYFREDIGVNMHHWHWHLVYPGDGPDEVVR--KDRRGELFFYMHSQLIARYNADRFCAK 252
Query: 183 LGSIPEFSWY-SPIKTGYYPLM--TSYYFPFAQRPDNYNLHSVKNYE-----AIRFLDIF 338
L + + Y PI GYYP M +S + R N L V + ++ L+ +
Sbjct: 253 LKKVRNLTNYREPIVEGYYPKMIRSSNNRSYPARAANTTLQDVDRVDNGTTVSVNDLERW 312
Query: 339 EKTFVQSLQKG-KFESYGKKIDFHDEKAINFVGN 437
+++ +G + G +I +++ I+ +G+
Sbjct: 313 RDRIHEAIDQGFVLDKSGNRIMLDEQRGIDILGD 346
>AJ459962-1|CAD31061.1| 685|Anopheles gambiae prophenoloxidase 9
protein.
Length = 685
Score = 50.4 bits (115), Expect = 4e-08
Identities = 50/189 (26%), Positives = 81/189 (42%), Gaps = 9/189 (4%)
Frame = +3
Query: 3 LTYLTEDIGFNSYYYYFHSHLPFWWSSERYGNLKHRRGEIYYNFYQQLTTRYYFERLTNG 182
L Y EDIG N +++++H P E K RRGE++Y ++Q RY ER N
Sbjct: 196 LAYFREDIGVNLHHWHWHLVYPQEGPLEVVD--KDRRGELFYYMHRQTVARYNVERFCNR 253
Query: 183 LGSI-PEFSWYSPIKTGYYP--LMTSYYFPFAQRPDNYNLHSVKNYEAIRFLDIFE---- 341
L ++ P + PI Y+P L ++ + R N L V + I E
Sbjct: 254 LPAVKPLKNLREPIPEAYFPKLLNSALNRTYPGRHANMVLSHVNRPDDDAVATILELESS 313
Query: 342 -KTFVQSLQKG-KFESYGKKIDFHDEKAINFVGNYWQENADLYEEEVTKDYQRSYDIVAR 515
+++Q G + G ++ +K I+ +GN EN+ L V Y +Y +
Sbjct: 314 LGRIKEAIQSGFAMAADGTRVPLDPKKGIDILGNI-MENSIL---SVNVPYYGNYHSLGH 369
Query: 516 HVLGAAPKP 542
++G P
Sbjct: 370 VLIGFIHDP 378
>M93689-1|AAA29368.1| 442|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 442
Score = 24.6 bits (51), Expect = 2.2
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -2
Query: 159 NNVLLIVGRNCNIFRHG 109
NN LL + +NCN FR+G
Sbjct: 78 NNQLLWLCKNCNEFRNG 94
>DQ974173-1|ABJ52813.1| 553|Anopheles gambiae serpin 16 protein.
Length = 553
Score = 23.0 bits (47), Expect = 6.6
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +2
Query: 143 INNTLLLRASYKRLGFHT 196
I NT+ LR +RLG HT
Sbjct: 381 ITNTINLRDVLQRLGLHT 398
>DQ230893-2|ABD94312.1| 525|Anopheles gambiae iduronate 2-sulfatase
precursor protein.
Length = 525
Score = 23.0 bits (47), Expect = 6.6
Identities = 10/26 (38%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +3
Query: 258 FPFAQRPDNYNLHSVKN-YEAIRFLD 332
FPF PD++ L ++ Y A+ F+D
Sbjct: 278 FPFGPVPDDFKLRIRQHYYAAVTFVD 303
>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
FGF-signaling promoter protein.
Length = 1197
Score = 23.0 bits (47), Expect = 6.6
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +2
Query: 236 SPDDFILFPIRSKAGQ 283
S D F+LFP + K GQ
Sbjct: 389 SHDSFVLFPRKVKVGQ 404
>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
precursor protein.
Length = 1623
Score = 22.6 bits (46), Expect = 8.7
Identities = 8/33 (24%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Frame = -2
Query: 372 CLSVGTVRK--SFQKCPRTVLLRSSLRCVDCSC 280
C+ G R + ++C +R C++C C
Sbjct: 367 CIDCGANRDGPNCERCKENFFMREDGYCINCGC 399
>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
protein.
Length = 1077
Score = 22.6 bits (46), Expect = 8.7
Identities = 12/50 (24%), Positives = 20/50 (40%), Gaps = 4/50 (8%)
Frame = -2
Query: 411 HRGNQFSCHTIRICLSVGTVRKSFQKCPRTV----LLRSSLRCVDCSCPA 274
HR N+ + C ++ T+ F C R +L + V CP+
Sbjct: 975 HRMNRVPSPSCSFCSAIDTLEHKFAGCRRVADAWQILHQRISVVISGCPS 1024
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 561,581
Number of Sequences: 2352
Number of extensions: 11419
Number of successful extensions: 53
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50460840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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