Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_O03
         (618 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    22   4.7  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   4.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   4.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   4.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   4.7  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    22   4.7  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   4.7  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   8.3  

>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +2

Query: 437 LPQPVPLVLREGQDAQR 487
           LP+P PLV ++G + +R
Sbjct: 236 LPKPTPLVPQQGFNMER 252


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +1

Query: 85  ATLDDTLCDDHLAFICEKDPKKLQT 159
           AT+D+   D H   +  + PKK+ T
Sbjct: 642 ATIDEAASDVHQTHMRIRPPKKIPT 666


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +1

Query: 85  ATLDDTLCDDHLAFICEKDPKKLQT 159
           AT+D+   D H   +  + PKK+ T
Sbjct: 642 ATIDEAASDVHQTHMRIRPPKKIPT 666


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +1

Query: 85  ATLDDTLCDDHLAFICEKDPKKLQT 159
           AT+D+   D H   +  + PKK+ T
Sbjct: 642 ATIDEAASDVHQTHMRIRPPKKIPT 666


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +1

Query: 85  ATLDDTLCDDHLAFICEKDPKKLQT 159
           AT+D+   D H   +  + PKK+ T
Sbjct: 642 ATIDEAASDVHQTHMRIRPPKKIPT 666


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -2

Query: 377 QRCCGVYLRSGDQKYT*YIHFMLLFMAQNP 288
           +R   V L + DQK    +H  L+ + +NP
Sbjct: 346 ERLLNVNLSAVDQKTRQEVHMFLMAIEKNP 375


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -2

Query: 377 QRCCGVYLRSGDQKYT*YIHFMLLFMAQNP 288
           +R   V L + DQK    +H  L+ + +NP
Sbjct: 346 ERLLNVNLSAVDQKTRQEVHMFLMAIEKNP 375


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -3

Query: 406 KFLAHAHDDG 377
           KF++H H+DG
Sbjct: 230 KFMSHIHNDG 239


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,681
Number of Sequences: 336
Number of extensions: 2601
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)