Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_O03
         (618 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              35   6e-04
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    23   3.2  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   5.5  
DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    21   7.3  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   7.3  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   9.6  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 35.1 bits (77), Expect = 6e-04
 Identities = 17/37 (45%), Positives = 20/37 (54%)
 Frame = +3

Query: 393 CARNLRPVCGSDGKTYHNQCLLYCERDKTHSDLKIVK 503
           C R  RPVC S+GK Y N C L+  R   HS   + K
Sbjct: 110 CPRRHRPVCASNGKIYANHCELH--RAACHSGSSLTK 144



 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +3

Query: 537 CTFIYAPVCGTDGNT*PNKCSL 602
           C   + PVC ++G    N C L
Sbjct: 110 CPRRHRPVCASNGKIYANHCEL 131


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = -2

Query: 185 LMVLGAILAVCNFFG 141
           L+VLG+I+ V +FFG
Sbjct: 55  LIVLGSIIFVISFFG 69


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/25 (36%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
 Frame = -1

Query: 579 CSRLCHRPGHI*RY-RRKDRLPHTY 508
           C RLC+R G + R+    + +P  Y
Sbjct: 247 CERLCNRLGRVKRFINWHEPIPEAY 271


>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 12/41 (29%), Positives = 19/41 (46%)
 Frame = -2

Query: 257 HYTFIYYNKTN*NNVLKCNYMIHCLMVLGAILAVCNFFGSF 135
           +Y    YN  N NN  K  Y I+ +  +   + V  + G+F
Sbjct: 100 NYNNYNYNNNNYNNYKKLYYNINYIEQIPVPVPVPIYCGNF 140


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -1

Query: 519 PHTYPLSRFSNRCASCPSRNTR 454
           P  YPL RF N     P R+ R
Sbjct: 67  PSVYPLLRFENPETHHPIRHGR 88


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -2

Query: 71  PPQFCFCRENWLSGCP 24
           P QF    +NW+ G P
Sbjct: 333 PEQFKVIIDNWIKGTP 348


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,855
Number of Sequences: 438
Number of extensions: 3238
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)