Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_O02
         (545 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q25802 Cluster: RpoD protein; n=2; Plasmodium|Rep: RpoD...    35   1.1  
UniRef50_Q70GV4 Cluster: Putative uncharacterized protein fp9.20...    35   1.4  
UniRef50_Q3LW59 Cluster: Putative uncharacterized protein; n=1; ...    33   4.3  
UniRef50_O97234 Cluster: Putative uncharacterized protein MAL3P2...    33   4.3  
UniRef50_Q8I3K5 Cluster: Putative uncharacterized protein PFE129...    32   9.9  

>UniRef50_Q25802 Cluster: RpoD protein; n=2; Plasmodium|Rep: RpoD
            protein - Plasmodium falciparum
          Length = 960

 Score = 35.1 bits (77), Expect = 1.1
 Identities = 23/65 (35%), Positives = 34/65 (52%)
 Frame = -3

Query: 264  NVYSGNIRFELSWK*YTTC*QV*CKMYKNLKYTYFYKLFYINVI*YTRNKIILNYFHHIH 85
            N+Y  +I FEL  K   +C ++    +K  KY     L  IN+I Y+ N   LN  H+I+
Sbjct: 836  NIYLPSIYFELIIKKMLSCIKIISNNFKIFKYNDIISLQLINIINYSLN---LNK-HYIY 891

Query: 84   MYVPV 70
             Y P+
Sbjct: 892  KYEPI 896


>UniRef50_Q70GV4 Cluster: Putative uncharacterized protein fp9.205;
           n=2; Fowlpox virus|Rep: Putative uncharacterized protein
           fp9.205 - Fowlpox virus (isolate HP-438[Munich])
          Length = 218

 Score = 34.7 bits (76), Expect = 1.4
 Identities = 16/50 (32%), Positives = 29/50 (58%)
 Frame = +3

Query: 168 YILNSYTFYIILVNMLCITSTIIQIVCYRCIHLQFIDKKTPLSKFLEEFV 317
           + LN+Y  Y ++++ +C+   II IVCY     ++I+KK       E+F+
Sbjct: 145 HFLNNYQLYTLVLSSICVVIIII-IVCYISYKHKYINKKIKTISNSEKFI 193


>UniRef50_Q3LW59 Cluster: Putative uncharacterized protein; n=1;
           Bigelowiella natans|Rep: Putative uncharacterized
           protein - Bigelowiella natans (Pedinomonas minutissima)
           (Chlorarachnion sp.(strain CCMP 621))
          Length = 100

 Score = 33.1 bits (72), Expect = 4.3
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -2

Query: 121 KQNNIKLFSSYSYVCTCYK*SINNFMRHIITKKKKKN 11
           KQN  KL      +C CY    ++F++H+  KK K+N
Sbjct: 42  KQNIFKLSKFDCTICKCYLWDSDSFLKHLTGKKHKRN 78


>UniRef50_O97234 Cluster: Putative uncharacterized protein
           MAL3P2.13; n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein MAL3P2.13 - Plasmodium
           falciparum (isolate 3D7)
          Length = 1446

 Score = 33.1 bits (72), Expect = 4.3
 Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
 Frame = -3

Query: 195 CK-MYKNLKYTYFYKLFYINVI*YTRNKIILNYFHHIHMY 79
           CK +Y+    T+FYKL Y+++      K+  N+F HIH+Y
Sbjct: 285 CKDLYEEAIITHFYKLKYLDI-----QKLYNNHFFHIHIY 319


>UniRef50_Q8I3K5 Cluster: Putative uncharacterized protein PFE1295c;
           n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein PFE1295c - Plasmodium falciparum
           (isolate 3D7)
          Length = 806

 Score = 31.9 bits (69), Expect = 9.9
 Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
 Frame = +3

Query: 141 LYKTIYKNKYILNSYTFYIILVNMLCITSTIIQIVCYRCIHL-QFIDKKTPLSKFLEEFV 317
           +Y TI KNKY  N     IIL+N       I  I   +C+HL  + D      K+L  F 
Sbjct: 511 IYNTILKNKYNHNEPNIKIILINF--NNKNIHYIYDNKCVHLNSYYDYLFKRLKYLLHFY 568

Query: 318 R 320
           R
Sbjct: 569 R 569


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 438,761,210
Number of Sequences: 1657284
Number of extensions: 7572481
Number of successful extensions: 15576
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14813
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15562
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 35405708495
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)