Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_O02
         (545 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82051-10|CAB04822.2|  577|Caenorhabditis elegans Hypothetical p...    27   6.7  
Z81109-1|CAB03245.1|  485|Caenorhabditis elegans Hypothetical pr...    27   6.7  
AY874872-1|AAX62733.1| 1668|Caenorhabditis elegans chitin syntha...    27   6.7  
AL021175-11|CAA15973.2|  577|Caenorhabditis elegans Hypothetical...    27   6.7  
AF026210-2|AAB71283.2| 1668|Caenorhabditis elegans Chitin syntha...    27   6.7  
Z92803-7|CAB07244.1|  445|Caenorhabditis elegans Hypothetical pr...    27   8.8  

>Z82051-10|CAB04822.2|  577|Caenorhabditis elegans Hypothetical
           protein T23D5.2 protein.
          Length = 577

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 9/41 (21%), Positives = 25/41 (60%)
 Frame = +3

Query: 141 LYKTIYKNKYILNSYTFYIILVNMLCITSTIIQIVCYRCIH 263
           +Y T +  + I  +Y   IIL +++C++ + ++++ +  +H
Sbjct: 33  IYLTAFHVEKITGAYKHLIILFSLICMSFSCLEVLAHPYLH 73


>Z81109-1|CAB03245.1|  485|Caenorhabditis elegans Hypothetical
           protein R10D12.1 protein.
          Length = 485

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 10/24 (41%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
 Frame = +3

Query: 183 YTFYIILVN-MLCITSTIIQIVCY 251
           Y  Y+I+++ MLC+TS +  +VC+
Sbjct: 34  YVRYLIMISTMLCLTSLMSNVVCF 57


>AY874872-1|AAX62733.1| 1668|Caenorhabditis elegans chitin synthase 2
            protein.
          Length = 1668

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 9/34 (26%), Positives = 23/34 (67%)
 Frame = +3

Query: 171  ILNSYTFYIILVNMLCITSTIIQIVCYRCIHLQF 272
            I NS+T Y +++N++ I S ++  +   C+++++
Sbjct: 1372 IRNSHTVYFLMINIVFIISVLVLQIHKDCLNIEW 1405


>AL021175-11|CAA15973.2|  577|Caenorhabditis elegans Hypothetical
           protein T23D5.2 protein.
          Length = 577

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 9/41 (21%), Positives = 25/41 (60%)
 Frame = +3

Query: 141 LYKTIYKNKYILNSYTFYIILVNMLCITSTIIQIVCYRCIH 263
           +Y T +  + I  +Y   IIL +++C++ + ++++ +  +H
Sbjct: 33  IYLTAFHVEKITGAYKHLIILFSLICMSFSCLEVLAHPYLH 73


>AF026210-2|AAB71283.2| 1668|Caenorhabditis elegans Chitin synthase
            protein 2 protein.
          Length = 1668

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 9/34 (26%), Positives = 23/34 (67%)
 Frame = +3

Query: 171  ILNSYTFYIILVNMLCITSTIIQIVCYRCIHLQF 272
            I NS+T Y +++N++ I S ++  +   C+++++
Sbjct: 1372 IRNSHTVYFLMINIVFIISVLVLQIHKDCLNIEW 1405


>Z92803-7|CAB07244.1|  445|Caenorhabditis elegans Hypothetical
           protein K01G5.5 protein.
          Length = 445

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 12/43 (27%), Positives = 24/43 (55%)
 Frame = +3

Query: 147 KTIYKNKYILNSYTFYIILVNMLCITSTIIQIVCYRCIHLQFI 275
           +T+Y+NK+I       + + N +C + T ++ +   C+HL  I
Sbjct: 185 RTVYENKFIEYDPAQQMGIFNCICESGTYVRTI---CVHLGLI 224


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,701,803
Number of Sequences: 27780
Number of extensions: 198200
Number of successful extensions: 401
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 399
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 401
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1102518352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)