Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_O01
         (516 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66515-5|CAA91349.1|  219|Caenorhabditis elegans Hypothetical pr...    49   2e-06
U64845-4|AAC48029.1|  623|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z83319-5|CAB05907.2|  446|Caenorhabditis elegans Hypothetical pr...    28   3.4  
U97193-1|AAB52438.1|  220|Caenorhabditis elegans Hypothetical pr...    27   6.0  
Z81510-4|CAB04164.1|  839|Caenorhabditis elegans Hypothetical pr...    27   8.0  
U21321-6|AAG00046.1|  206|Caenorhabditis elegans Hypothetical pr...    27   8.0  
AF125971-8|AAP86614.1|   92|Caenorhabditis elegans Hypothetical ...    27   8.0  

>Z66515-5|CAA91349.1|  219|Caenorhabditis elegans Hypothetical
           protein R53.5 protein.
          Length = 219

 Score = 49.2 bits (112), Expect = 2e-06
 Identities = 36/105 (34%), Positives = 50/105 (47%), Gaps = 2/105 (1%)
 Frame = +2

Query: 56  YATIMAVDLNEI-GAQKVKNVAN-GEISELKSFWEDQNAAIIFFRRWGCMLCRLWAKELS 229
           +A + A  L  I G  K K V    E     S ++     ++  RR GCMLCR  A EL 
Sbjct: 34  FAHLAAAKLVPIRGGPKEKEVVERNEQFTADSLFKKGPIMVMAVRRPGCMLCRREAAELH 93

Query: 230 EIAPILKNNNIKLIGVGVEEAGAKDFVDGNYFDGDLYYVDXVSTY 364
            + P+LK   I+L  V  E  GA +F   ++F G   Y+D   T+
Sbjct: 94  TLLPLLKEKGIELAAVVHETRGANEF--KSWFSGGDVYLDTDRTF 136


>U64845-4|AAC48029.1|  623|Caenorhabditis elegans Hypothetical
           protein F45F2.7 protein.
          Length = 623

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = -2

Query: 143 ISVPKFLHSPHSSLFEH-QFHLNPRPLSLRINLL 45
           ++VP  L SP  SL EH Q+  NP+ L   + LL
Sbjct: 33  VTVPNALPSPTESLLEHPQWIRNPKALRFLVGLL 66


>Z83319-5|CAB05907.2|  446|Caenorhabditis elegans Hypothetical
           protein T02D1.4 protein.
          Length = 446

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 14/63 (22%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
 Frame = -3

Query: 403 NSNHIEPFETQLLICGHVIY-IVQITVKVISIHKVLSTCFLDTHSNQFNVIIFQYRRYFA 227
           NS+HI+ +    ++C  ++   + +   +    +++S    D+H N+   + + Y+ YF 
Sbjct: 113 NSDHIKYYIAIRMLCTRLLMNSLTLICMLPQALRIVSAWDSDSHINEIYWVYYPYQIYFV 172

Query: 226 QLF 218
            LF
Sbjct: 173 NLF 175


>U97193-1|AAB52438.1|  220|Caenorhabditis elegans Hypothetical
           protein C06A5.4 protein.
          Length = 220

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +2

Query: 239 PILKNNNIKLIGVGVEEAGAKDFVD 313
           P LKN N++L G G  + G  D+ D
Sbjct: 60  PKLKNRNVRLRGAGRPQKGGDDYKD 84


>Z81510-4|CAB04164.1|  839|Caenorhabditis elegans Hypothetical
           protein F21D9.5 protein.
          Length = 839

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 15/51 (29%), Positives = 30/51 (58%)
 Frame = +2

Query: 38  IRTTN*YATIMAVDLNEIGAQKVKNVANGEISELKSFWEDQNAAIIFFRRW 190
           ++++N +   M +DL +     +K V +  +++L +F ED+NA  IF + W
Sbjct: 40  LKSSNVHDASMHIDLKKQPGITLKVVKSCGVAKL-NFPEDKNAVNIFVKTW 89


>U21321-6|AAG00046.1|  206|Caenorhabditis elegans Hypothetical
           protein ZK177.3 protein.
          Length = 206

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 14/26 (53%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
 Frame = -3

Query: 76  HGHYR-CVLICCSYCKKKL**NSRRN 2
           HGH R   +I C YCKKK    SR N
Sbjct: 57  HGHIRQSNVIHCPYCKKKKTFKSRNN 82


>AF125971-8|AAP86614.1|   92|Caenorhabditis elegans Hypothetical
           protein Y4C6B.7 protein.
          Length = 92

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +1

Query: 94  CSKSEECGEWRNFGTEIFLGRS 159
           C + +EC EW+  GTE   G +
Sbjct: 21  CCQFDECNEWKGDGTEFKAGET 42


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,587,769
Number of Sequences: 27780
Number of extensions: 264104
Number of successful extensions: 754
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 754
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)