Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_N22
         (152 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46240-3|CAA86312.1|  309|Caenorhabditis elegans Hypothetical pr...    26   3.2  
Z75547-5|CAA99899.1|  207|Caenorhabditis elegans Hypothetical pr...    26   4.2  
AF026212-1|AAF99971.1|  807|Caenorhabditis elegans Hypothetical ...    25   7.3  
AF043693-4|AAB97538.1|  971|Caenorhabditis elegans Hypothetical ...    25   9.6  
AC199169-2|ABO33254.1|  319|Caenorhabditis elegans Hypothetical ...    25   9.6  
AC024751-7|AAK21507.2| 1258|Caenorhabditis elegans Hypothetical ...    25   9.6  

>Z46240-3|CAA86312.1|  309|Caenorhabditis elegans Hypothetical
           protein B0272.3 protein.
          Length = 309

 Score = 26.2 bits (55), Expect = 3.2
 Identities = 11/34 (32%), Positives = 24/34 (70%)
 Frame = +1

Query: 49  LELLGGTCDLAIAVKDAIFVQECVPENLELKKKV 150
           L+ +  + +++ +VKDA  V E + EN+++K+K+
Sbjct: 92  LDRIKMSTNVSDSVKDADLVIEAIVENIDIKRKL 125


>Z75547-5|CAA99899.1|  207|Caenorhabditis elegans Hypothetical
           protein R11D1.4 protein.
          Length = 207

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -2

Query: 136 VPNFPGRILVRKSHP*RQSLNHRYLPTIPTFS 41
           V NF  +I+   + P + S   +YLP I TFS
Sbjct: 166 VDNFCIKIVTENATPIQWSCGKKYLPNILTFS 197


>AF026212-1|AAF99971.1|  807|Caenorhabditis elegans Hypothetical
           protein F52G3.3 protein.
          Length = 807

 Score = 25.0 bits (52), Expect = 7.3
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -2

Query: 88  RQSLNHRYLPTIPTFSDLNLEAMTTR 11
           +Q L+H  LP I T    NL+A+ TR
Sbjct: 131 QQDLSHMILPRIHTPPARNLQAIATR 156


>AF043693-4|AAB97538.1|  971|Caenorhabditis elegans Hypothetical
           protein C34B2.6 protein.
          Length = 971

 Score = 24.6 bits (51), Expect = 9.6
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -1

Query: 89  TAIAKSQVPPNNSNFFRFKLGSHDDTQRL 3
           T+IAKS     N  +FRF +G   D   +
Sbjct: 519 TSIAKSIATALNREYFRFSVGGMTDVAEI 547


>AC199169-2|ABO33254.1|  319|Caenorhabditis elegans Hypothetical
           protein F38A1.15 protein.
          Length = 319

 Score = 24.6 bits (51), Expect = 9.6
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = +2

Query: 50  WNCWEVPVI*RLPLRMRFSYKNASRKIWNSK 142
           W  W+  +I +LP+   + Y   + K+ N K
Sbjct: 51  WETWDCVLIYKLPVGCEYFYIKDNLKVTNQK 81


>AC024751-7|AAK21507.2| 1258|Caenorhabditis elegans Hypothetical
            protein Y18H1A.3 protein.
          Length = 1258

 Score = 24.6 bits (51), Expect = 9.6
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -2

Query: 103  KSHP*RQSLNHRYLPTI 53
            K  P  QS+NH Y+PTI
Sbjct: 1242 KPMPLAQSINHLYVPTI 1258


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,743,067
Number of Sequences: 27780
Number of extensions: 53580
Number of successful extensions: 132
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 132
length of database: 12,740,198
effective HSP length: 31
effective length of database: 11,879,018
effective search space used: 225701342
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)