Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_N21
(443 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical pr... 66 1e-11
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p... 57 7e-09
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt... 57 7e-09
U40954-1|ABA00179.1| 251|Caenorhabditis elegans Hypothetical pr... 48 2e-06
U88173-9|AAK21384.3| 320|Caenorhabditis elegans Hypothetical pr... 42 3e-04
U39993-3|AAK72060.1| 728|Caenorhabditis elegans Hypothetical pr... 32 0.22
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 31 0.50
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 31 0.50
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 31 0.50
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 31 0.50
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 31 0.50
Z81546-1|CAB04449.2| 859|Caenorhabditis elegans Hypothetical pr... 29 1.5
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 28 2.7
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 28 2.7
AF012437-1|AAC47715.1| 1846|Caenorhabditis elegans insulin recep... 28 2.7
AC084196-6|AAK29947.2| 1843|Caenorhabditis elegans Abnormal daue... 28 2.7
U50311-10|AAA92314.1| 135|Caenorhabditis elegans Inhibitor of s... 25 4.7
Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical pr... 27 6.1
Z74039-3|CAA98502.1| 410|Caenorhabditis elegans Hypothetical pr... 27 6.1
Z81482-5|CAB03956.3| 409|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z14092-9|CAA78474.1| 1429|Caenorhabditis elegans Hypothetical pr... 27 8.1
U72211-1|AAB97099.1| 409|Caenorhabditis elegans putative transc... 27 8.1
M12069-1|AAA70191.1| 1429|Caenorhabditis elegans protein ( C.ele... 27 8.1
AF098500-1|AAC67400.2| 311|Caenorhabditis elegans Hypothetical ... 27 8.1
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l... 27 8.1
>Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical
protein F29G6.1 protein.
Length = 1170
Score = 65.7 bits (153), Expect = 1e-11
Identities = 35/98 (35%), Positives = 47/98 (47%), Gaps = 5/98 (5%)
Frame = +3
Query: 120 PSSCACARNLRPVCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGTCEEADPCVCTFIYAP 299
P C C +RPVCG+D TY+N C L C + +T+ DL GTC D C + P
Sbjct: 16 PPDCDCPSVIRPVCGTDNVTYNNLCFLRCVQ-RTNEDLLFFYNGTC--CDKKECEKVGTP 72
Query: 300 VCGTDGNTYPNKC---SLEC--SRPLAPSLEMKHRGEC 398
+C G T+ N C +C + + SL H G C
Sbjct: 73 ICDNFGETHINDCHFAQFQCIMKKSMGLSLTKLHMGRC 110
Score = 48.4 bits (110), Expect = 2e-06
Identities = 30/96 (31%), Positives = 42/96 (43%), Gaps = 6/96 (6%)
Frame = +3
Query: 135 CARNLRPVCGSDGKTYHNQCLLYCER----DKTHSDLKIVKEGTCEEADPCV--CTFIYA 296
C + +PVC S G + N C R K H + I E C + C CT
Sbjct: 537 CPTDGQPVCDSAGNLHGNLCEFTYSRCIAASKGHQ-IHIATEENCISKEACQMPCTDDKH 595
Query: 297 PVCGTDGNTYPNKCSLECSRPLAPSLEMKHRGECHE 404
P+C +D +TY N C + L LE+ +G+C E
Sbjct: 596 PICASDFSTYENLCQFRKQKCLDSELEVLFKGKCSE 631
Score = 47.6 bits (108), Expect = 4e-06
Identities = 30/101 (29%), Positives = 54/101 (53%), Gaps = 12/101 (11%)
Frame = +3
Query: 132 ACARNLRPVCGSDGKTYHNQCLL-----YCERDKTHSDLKIVK--EGTCEEADPCVCTFI 290
AC + PVC S+G+ N+C L E + T D K+VK +G C + C + +
Sbjct: 871 ACPKEYSPVCASNGQNIVNECELDKIRCLVENNVTTGD-KLVKDYDGECCRIENCDIS-V 928
Query: 291 YAPVCGTDGNTYPNKCSLE---C--SRPLAPSLEMKHRGEC 398
++PVC T+G T+ N C ++ C + ++++ ++G+C
Sbjct: 929 FSPVCDTEGVTHANMCLMDQNACIQMKKNKKTIQVSYQGQC 969
Score = 47.2 bits (107), Expect = 5e-06
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +3
Query: 126 SCACARNLRPVCGSDGKTYHNQCLLYCE-RDKTHSDLKIVKEGTCEEADPCVCTFIYAPV 302
S C + P+CG++G T+ N C L E + +S +++ G C + + C ++PV
Sbjct: 769 SMECDNSYDPLCGTNGVTFTNACSLQKEICESANSTIEVAYTGMCCDTN---CPSDFSPV 825
Query: 303 CGTDGNTYPNKCSLECSRPLA 365
C + G+T+ N C R +A
Sbjct: 826 CDSKGSTHQNICHFGVKRCIA 846
Score = 40.3 bits (90), Expect = 6e-04
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = +3
Query: 273 CVCTFIYAPVCGTDGNTYPNKCSLECSRPLAPSLEMKHRGECHEVK 410
C C + PVCGTD TY N C L C + L + G C + K
Sbjct: 19 CDCPSVIRPVCGTDNVTYNNLCFLRCVQRTNEDLLFFYNGTCCDKK 64
Score = 39.5 bits (88), Expect = 0.001
Identities = 30/97 (30%), Positives = 42/97 (43%), Gaps = 9/97 (9%)
Frame = +3
Query: 135 CARNLRPVCGSDGKTYH-NQC---LLYCERDKTHSDLKIVKEGTCEEADPCVCTFIYAPV 302
C + PVC DG H N C + CE ++ + L I G C C A V
Sbjct: 974 CDEDKTPVC--DGTITHPNICRFRIAQCEAERVNKTLSIAYSGECCLLPKGECESSGA-V 1030
Query: 303 CGTDGNTYPNKCSLECSRPLAPSLEMK-----HRGEC 398
C ++G T+ N C + R +A ++ K H GEC
Sbjct: 1031 CDSEGQTHMNHCVYQQRRCMAQTISQKTLNIVHTGEC 1067
Score = 37.1 bits (82), Expect = 0.006
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
Frame = +3
Query: 132 ACARNLRPVCGSDGKTYHNQCLLY---CERDKTHSD---LKIVKEGTCEEADPCVCTFIY 293
+C + +PVC S G+T+ + C + C DK H+ L + +G C P CT
Sbjct: 1072 SCPKTGQPVCDSRGRTHDSLCHFHNSKCIFDKIHTQNTTLTLDYQGKC---CPAGCTDEL 1128
Query: 294 APVCGTDGNTYPNKC 338
+ +C N Y N C
Sbjct: 1129 SVICDQHENIYRNSC 1143
Score = 35.5 bits (78), Expect = 0.017
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +3
Query: 279 CTFIYAPVCGTDGNTYPNKCSL--ECSRPLAPSLEMKHRGECHEVKV-ADIQPCIC 437
C Y P+CGT+G T+ N CSL E ++E+ + G C + +D P +C
Sbjct: 772 CDNSYDPLCGTNGVTFTNACSLQKEICESANSTIEVAYTGMCCDTNCPSDFSP-VC 826
Score = 34.3 bits (75), Expect = 0.040
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 7/81 (8%)
Frame = +3
Query: 135 CARNLRPVCGSDGKTYHNQC---LLYCERDKTHS-DLKIVKEGTCEEADPCV--CTFI-Y 293
C + P+C + G+T+ N C C K+ L + G C D C CT +
Sbjct: 66 CEKVGTPICDNFGETHINDCHFAQFQCIMKKSMGLSLTKLHMGRCSSKD-CNHNCTNTEF 124
Query: 294 APVCGTDGNTYPNKCSLECSR 356
PVC T+G+ Y N C + R
Sbjct: 125 DPVCDTNGSVYRNLCVFQMRR 145
Score = 28.7 bits (61), Expect = 2.0
Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 8/77 (10%)
Frame = +3
Query: 135 CARNLRPVCGSDGKTYHNQC---LLYCERDKTH-SDLKIVKEGTCE-EADPCV-C--TFI 290
C ++ PVC + +T+ N C C+ +K S + I G C C+ C
Sbjct: 257 CDKSWDPVCDTRNRTHKNVCQFKFFACKINKIDGSVIDIAHSGACRARKSTCITCPKDEK 316
Query: 291 YAPVCGTDGNTYPNKCS 341
P+C T+P CS
Sbjct: 317 KIPICDNRNMTHPTLCS 333
Score = 26.6 bits (56), Expect = 8.1
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +3
Query: 135 CARNLRPVCGSDGKTYHNQC 194
C+R+++PVC T+ N C
Sbjct: 375 CSRDVKPVCDEANNTHQNLC 394
>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
protein F41G3.12 protein.
Length = 1483
Score = 56.8 bits (131), Expect = 7e-09
Identities = 36/115 (31%), Positives = 51/115 (44%), Gaps = 27/115 (23%)
Frame = +3
Query: 135 CARNLRPVCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGTCEEA-DPCV----------- 278
C N VCG+DGKTY N+C L K D+ + K G C+EA PC
Sbjct: 323 CTMNSAHVCGTDGKTYLNECFLKLAACKEQKDILVWKRGNCDEAGSPCEKMECGFWGSCV 382
Query: 279 --------------CTFIYAPVCGTDGNTYPNKCSL-ECSRPLAPSLEMKHRGEC 398
C + PVC T+G T+ N+C + + S +++KH+G C
Sbjct: 383 VKPDRTAECECPNRCEDVMRPVCATNGETFDNECEMKKKSCETKSMIKVKHQGTC 437
Score = 39.9 bits (89), Expect = 8e-04
Identities = 28/90 (31%), Positives = 38/90 (42%), Gaps = 2/90 (2%)
Frame = +3
Query: 132 ACARNLRPVCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGTCE--EADPCVCTFIYAPVC 305
+C + VCGSDGKTY N+C L ++ + CE + C F A V
Sbjct: 467 SCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSACEACKLKKEKCDFYSACVV 526
Query: 306 GTDGNTYPNKCSLECSRPLAPSLEMKHRGE 395
G + KC +C PS EM+ E
Sbjct: 527 G-ENEKAECKCPDDC-----PSYEMEEGKE 550
Score = 39.1 bits (87), Expect = 0.001
Identities = 35/125 (28%), Positives = 57/125 (45%), Gaps = 29/125 (23%)
Frame = +3
Query: 150 RPVCGSDGKTYHNQCLLYCERDKTHSDLKIVK--EGTCEE-------------ADPCVCT 284
+ VCG+DG TY ++C + ++ H ++ EG C+E + CVC+
Sbjct: 549 KEVCGTDGVTYSSEC--HMKKSACHQSKFVMTAFEGKCDECLHVQCRYGEECRSGVCVCS 606
Query: 285 F-------IYAPVCGTDGNTYPNKCSLECS--RPLAPSLEMKHRGECHEVKVA--DI--- 422
+ + A +CG +G YP+ C L+ + + AP EM CH K + D
Sbjct: 607 YNCPANPPLSARICGENGVLYPSLCHLQLASCQKGAPISEMP-PSHCHSSKTSFPDFKVR 665
Query: 423 QPCIC 437
+PC C
Sbjct: 666 RPCAC 670
Score = 33.5 bits (73), Expect = 0.071
Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 5/92 (5%)
Frame = +3
Query: 126 SCACARNLRPVCGSDGKTYHNQC---LLYCERDKTHSDLKIVKE--GTCEEADPCVCTFI 290
+C + N P+CGSDG Y+NQC + C + L ++ G D C C +
Sbjct: 685 TCNLSSNY-PICGSDGIVYNNQCHLNTISCRDQREIHVLPLISHWIGESRVLDSCQCNRV 743
Query: 291 YAPVCGTDGNTYPNKCSLECSRPLAPSLEMKH 386
G+ G+T +C RP ++ H
Sbjct: 744 -----GSFGHTCDETGQCKC-RPGVAGIKCDH 769
Score = 32.7 bits (71), Expect = 0.12
Identities = 31/110 (28%), Positives = 43/110 (39%), Gaps = 26/110 (23%)
Frame = +3
Query: 153 PVCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGTCEEADPC------------------- 275
PVC S G Y + C L ++ +++ + G C DPC
Sbjct: 259 PVCSSHGVDYQSSCHLRHHACESKTNITVKFFGRC---DPCHGHKCPNGQTCQLGVDRRP 315
Query: 276 ------VCTFIYAPVCGTDGNTYPNKCSLECSR-PLAPSLEMKHRGECHE 404
CT A VCGTDG TY N+C L+ + + + RG C E
Sbjct: 316 ECKCSEQCTMNSAHVCGTDGKTYLNECFLKLAACKEQKDILVWKRGNCDE 365
Score = 30.7 bits (66), Expect(2) = 0.059
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Frame = +3
Query: 156 VCGSDGKTYHNQCLLY---CERDKTHSDLKIVKEGTCEEADPC 275
VCGSD +Y + C L C K L++ +G C++ +PC
Sbjct: 176 VCGSDHVSYSSFCHLSVRSCVLAKNGVRLRVATKGPCKKRNPC 218
Score = 28.7 bits (61), Expect = 2.0
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +3
Query: 300 VCGTDGNTYPNKCSLE 347
VCG+DG TY N C L+
Sbjct: 880 VCGSDGTTYSNLCELK 895
Score = 27.9 bits (59), Expect = 3.5
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +3
Query: 156 VCGSDGKTYHNQCLL 200
VCGSDG TY N C L
Sbjct: 880 VCGSDGTTYSNLCEL 894
Score = 21.8 bits (44), Expect(2) = 0.059
Identities = 14/50 (28%), Positives = 22/50 (44%), Gaps = 4/50 (8%)
Frame = +3
Query: 294 APVCGTDGNTYPNKCSLE---CSRPLAPSLEMKHRGE-CHEVKVADIQPC 431
+PVC + G Y + C L C +++ R + CH K + Q C
Sbjct: 258 SPVCSSHGVDYQSSCHLRHHACESKTNITVKFFGRCDPCHGHKCPNGQTC 307
>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
protein) homologfamily member protein.
Length = 1473
Score = 56.8 bits (131), Expect = 7e-09
Identities = 36/115 (31%), Positives = 51/115 (44%), Gaps = 27/115 (23%)
Frame = +3
Query: 135 CARNLRPVCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGTCEEA-DPCV----------- 278
C N VCG+DGKTY N+C L K D+ + K G C+EA PC
Sbjct: 331 CTMNSAHVCGTDGKTYLNECFLKLAACKEQKDILVWKRGNCDEAGSPCEKMECGFWGSCV 390
Query: 279 --------------CTFIYAPVCGTDGNTYPNKCSL-ECSRPLAPSLEMKHRGEC 398
C + PVC T+G T+ N+C + + S +++KH+G C
Sbjct: 391 VKPDRTAECECPNRCEDVMRPVCATNGETFDNECEMKKKSCETKSMIKVKHQGTC 445
Score = 43.2 bits (97), Expect = 9e-05
Identities = 34/122 (27%), Positives = 55/122 (45%), Gaps = 24/122 (19%)
Frame = +3
Query: 150 RPVCGSDGKTYHNQCLLYCERDKTHSDLKIVK--EGTCEE-------------ADPCVCT 284
+ VCG+DG TY ++C + ++ H ++ EG C+E + CVC+
Sbjct: 557 KEVCGTDGVTYSSEC--HMKKSACHQSKFVMTAFEGKCDECLHVQCRYGEECRSGVCVCS 614
Query: 285 F-------IYAPVCGTDGNTYPNKCSLECS--RPLAPSLEMKHRGECHEVKVADIQPCIC 437
+ + A +CG +G YP+ C L+ + + AP EM CH K + C C
Sbjct: 615 YNCPANPPLSARICGENGVLYPSLCHLQLASCQKGAPISEMP-PSHCHSSKTSFPDSCQC 673
Query: 438 TR 443
R
Sbjct: 674 NR 675
Score = 39.9 bits (89), Expect = 8e-04
Identities = 28/90 (31%), Positives = 38/90 (42%), Gaps = 2/90 (2%)
Frame = +3
Query: 132 ACARNLRPVCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGTCE--EADPCVCTFIYAPVC 305
+C + VCGSDGKTY N+C L ++ + CE + C F A V
Sbjct: 475 SCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSACEACKLKKEKCDFYSACVV 534
Query: 306 GTDGNTYPNKCSLECSRPLAPSLEMKHRGE 395
G + KC +C PS EM+ E
Sbjct: 535 G-ENEKAECKCPDDC-----PSYEMEEGKE 558
Score = 33.1 bits (72), Expect = 0.093
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +3
Query: 156 VCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGTCEE 263
VCGSDG TY N C L K D+ V G C++
Sbjct: 819 VCGSDGTTYSNLCELKMFACKHQIDVVPVSMGICDD 854
Score = 32.7 bits (71), Expect = 0.12
Identities = 31/110 (28%), Positives = 43/110 (39%), Gaps = 26/110 (23%)
Frame = +3
Query: 153 PVCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGTCEEADPC------------------- 275
PVC S G Y + C L ++ +++ + G C DPC
Sbjct: 267 PVCSSHGVDYQSSCHLRHHACESKTNITVKFFGRC---DPCHGHKCPNGQTCQLGVDRRP 323
Query: 276 ------VCTFIYAPVCGTDGNTYPNKCSLECSR-PLAPSLEMKHRGECHE 404
CT A VCGTDG TY N+C L+ + + + RG C E
Sbjct: 324 ECKCSEQCTMNSAHVCGTDGKTYLNECFLKLAACKEQKDILVWKRGNCDE 373
Score = 30.7 bits (66), Expect(2) = 0.059
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Frame = +3
Query: 156 VCGSDGKTYHNQCLLY---CERDKTHSDLKIVKEGTCEEADPC 275
VCGSD +Y + C L C K L++ +G C++ +PC
Sbjct: 184 VCGSDHVSYSSFCHLSVRSCVLAKNGVRLRVATKGPCKKRNPC 226
Score = 28.7 bits (61), Expect = 2.0
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +3
Query: 300 VCGTDGNTYPNKCSLE 347
VCG+DG TY N C L+
Sbjct: 819 VCGSDGTTYSNLCELK 834
Score = 21.8 bits (44), Expect(2) = 0.059
Identities = 14/50 (28%), Positives = 22/50 (44%), Gaps = 4/50 (8%)
Frame = +3
Query: 294 APVCGTDGNTYPNKCSLE---CSRPLAPSLEMKHRGE-CHEVKVADIQPC 431
+PVC + G Y + C L C +++ R + CH K + Q C
Sbjct: 266 SPVCSSHGVDYQSSCHLRHHACESKTNITVKFFGRCDPCHGHKCPNGQTC 315
>U40954-1|ABA00179.1| 251|Caenorhabditis elegans Hypothetical
protein ZK813.6 protein.
Length = 251
Score = 48.4 bits (110), Expect = 2e-06
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Frame = +3
Query: 123 SSCACARNLRPVCGSDGK---TYHNQCLLYCERDKTHSDLKIVKEGTCEEADPCVCTFIY 293
S+C+C + PVC +G TY N+C+ C ++ DL ++ EG+C A C
Sbjct: 23 STCSCKPEIDPVCVREGPYQYTYSNKCVFQCAQE-NKKDLVLLYEGSCCSAR--YCNMFE 79
Query: 294 APVCGTDGNTYPNKCSLE 347
PVC ++G Y C E
Sbjct: 80 QPVC-SEGQMYQTVCEFE 96
Score = 40.3 bits (90), Expect = 6e-04
Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 4/103 (3%)
Frame = +3
Query: 135 CARNLRPVCGSDGKTYHNQCLLY---C-ERDKTHSDLKIVKEGTCEEADPCVCTFIYAPV 302
C PVC G+T+ N C C +++ + L++ G C E D C V
Sbjct: 125 CPTEWNPVCDKKGQTHANFCTFLNSKCYHKNQLNESLEVDYSGVCCE-DMCSAGQTSLTV 183
Query: 303 CGTDGNTYPNKCSLECSRPLAPSLEMKHRGECHEVKVADIQPC 431
C ++GNT+ + CS +A +M+ +++A + PC
Sbjct: 184 CDSEGNTHTDICSFY----IAKCRQMRRGIGKKRLQIAGVGPC 222
Score = 31.9 bits (69), Expect = 0.22
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = +3
Query: 258 EEADPCVCTFIYAPVCGTDGN---TYPNKCSLECSRPLAPSLEMKHRGECHEVKVADI-- 422
E C C PVC +G TY NKC +C++ L + + G C + ++
Sbjct: 20 EPNSTCSCKPEIDPVCVREGPYQYTYSNKCVFQCAQENKKDLVLLYEGSCCSARYCNMFE 79
Query: 423 QPCICT 440
QP +C+
Sbjct: 80 QP-VCS 84
>U88173-9|AAK21384.3| 320|Caenorhabditis elegans Hypothetical
protein F46F11.7 protein.
Length = 320
Score = 41.5 bits (93), Expect = 3e-04
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Frame = +3
Query: 138 ARNLRPVCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGTCEEADPCVCTFIYAPVCGTDG 317
AR++ CG GK + QC+L + + + + ++G CE+ C I CG +
Sbjct: 89 ARSIVSDCGKHGKCVNGQCILNRCQGVSCDEGSMCRDGKCEKVLETFC--IGHADCGPNM 146
Query: 318 NTYPNKCSLECSRPL--APSLEMKHRGECH 401
NKC L+ PL E+ H G+C+
Sbjct: 147 LCQQNKCQLKPQEPLCNCQPHEICHHGQCY 176
>U39993-3|AAK72060.1| 728|Caenorhabditis elegans Hypothetical
protein F47E1.4 protein.
Length = 728
Score = 31.9 bits (69), Expect = 0.22
Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = +3
Query: 123 SSCACAR-NLRPVCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGTCE 260
S C+C +L PVC +DG Y + C C ++ +CE
Sbjct: 526 SQCSCENAHLYPVCSADGTAYFSPCHAGCREATQFGSDPVIGFASCE 572
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 30.7 bits (66), Expect = 0.50
Identities = 24/88 (27%), Positives = 35/88 (39%)
Frame = +3
Query: 135 CARNLRPVCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGTCEEADPCVCTFIYAPVCGTD 314
C+ N R C +DG + +CL ER + + G+C DP C C
Sbjct: 948 CSENER--CTNDGSDWFCECLPGFERIRNG---QCAYPGSCNPNDPMSCDVRKRQQCLPR 1002
Query: 315 GNTYPNKCSLECSRPLAPSLEMKHRGEC 398
GN Y +C R P ++ + EC
Sbjct: 1003 GNIYTCQCGRNEKR--HPITDICLKNEC 1028
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 30.7 bits (66), Expect = 0.50
Identities = 24/88 (27%), Positives = 35/88 (39%)
Frame = +3
Query: 135 CARNLRPVCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGTCEEADPCVCTFIYAPVCGTD 314
C+ N R C +DG + +CL ER + + G+C DP C C
Sbjct: 1532 CSENER--CTNDGSDWFCECLPGFERIRNG---QCAYPGSCNPNDPMSCDVRKRQQCLPR 1586
Query: 315 GNTYPNKCSLECSRPLAPSLEMKHRGEC 398
GN Y +C R P ++ + EC
Sbjct: 1587 GNIYTCQCGRNEKR--HPITDICLKNEC 1612
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 30.7 bits (66), Expect = 0.50
Identities = 24/88 (27%), Positives = 35/88 (39%)
Frame = +3
Query: 135 CARNLRPVCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGTCEEADPCVCTFIYAPVCGTD 314
C+ N R C +DG + +CL ER + + G+C DP C C
Sbjct: 948 CSENER--CTNDGSDWFCECLPGFERIRNG---QCAYPGSCNPNDPMSCDVRKRQQCLPR 1002
Query: 315 GNTYPNKCSLECSRPLAPSLEMKHRGEC 398
GN Y +C R P ++ + EC
Sbjct: 1003 GNIYTCQCGRNEKR--HPITDICLKNEC 1028
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 30.7 bits (66), Expect = 0.50
Identities = 24/88 (27%), Positives = 35/88 (39%)
Frame = +3
Query: 135 CARNLRPVCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGTCEEADPCVCTFIYAPVCGTD 314
C+ N R C +DG + +CL ER + + G+C DP C C
Sbjct: 1532 CSENER--CTNDGSDWFCECLPGFERIRNG---QCAYPGSCNPNDPMSCDVRKRQQCLPR 1586
Query: 315 GNTYPNKCSLECSRPLAPSLEMKHRGEC 398
GN Y +C R P ++ + EC
Sbjct: 1587 GNIYTCQCGRNEKR--HPITDICLKNEC 1612
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 30.7 bits (66), Expect = 0.50
Identities = 24/88 (27%), Positives = 35/88 (39%)
Frame = +3
Query: 135 CARNLRPVCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGTCEEADPCVCTFIYAPVCGTD 314
C+ N R C +DG + +CL ER + + G+C DP C C
Sbjct: 1532 CSENER--CTNDGSDWFCECLPGFERIRNG---QCAYPGSCNPNDPMSCDVRKRQQCLPR 1586
Query: 315 GNTYPNKCSLECSRPLAPSLEMKHRGEC 398
GN Y +C R P ++ + EC
Sbjct: 1587 GNIYTCQCGRNEKR--HPITDICLKNEC 1612
>Z81546-1|CAB04449.2| 859|Caenorhabditis elegans Hypothetical
protein F53A2.1 protein.
Length = 859
Score = 29.1 bits (62), Expect = 1.5
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 186 NQCLLYCERDKTHSDLKIVKEGTCEEADPCVCT 284
N +LY R K HS++ I G C++ PC+CT
Sbjct: 450 NLAVLYKIR-KEHSEIIIHNLGHCDKHLPCICT 481
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 28.3 bits (60), Expect = 2.7
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = +2
Query: 98 NIRRNSAAVVMRVRKKLKTGLRIRRQDLPQPVPLVLREGQDAQRFE-NRERGYV*GSRSL 274
++R +S+ +++RV+ K+ +RRQ PQP P + Q Q++E E YV SR+L
Sbjct: 566 SMRGSSSPILVRVQLSSKSPDSVRRQVQPQPQP----QPQQQQQYEAYGEADYV--SRNL 619
Query: 275 RL 280
L
Sbjct: 620 PL 621
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 28.3 bits (60), Expect = 2.7
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = +2
Query: 98 NIRRNSAAVVMRVRKKLKTGLRIRRQDLPQPVPLVLREGQDAQRFE-NRERGYV*GSRSL 274
++R +S+ +++RV+ K+ +RRQ PQP P + Q Q++E E YV SR+L
Sbjct: 788 SMRGSSSPILVRVQLSSKSPDSVRRQVQPQPQP----QPQQQQQYEAYGEADYV--SRNL 841
Query: 275 RL 280
L
Sbjct: 842 PL 843
>AF012437-1|AAC47715.1| 1846|Caenorhabditis elegans insulin receptor
homolog protein.
Length = 1846
Score = 28.3 bits (60), Expect = 2.7
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +3
Query: 141 RNLRPVCGSDGKTYHNQCLLYCER--DKT--HSDLKIVKEGTCEE 263
+ + P C ++G H+QC+ CER D T H+ + +G C E
Sbjct: 380 KEIGPGCDANGDRCHDQCVGGCERVNDATACHACKNVYHKGKCIE 424
>AC084196-6|AAK29947.2| 1843|Caenorhabditis elegans Abnormal dauer
formation protein 2 protein.
Length = 1843
Score = 28.3 bits (60), Expect = 2.7
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +3
Query: 141 RNLRPVCGSDGKTYHNQCLLYCER--DKT--HSDLKIVKEGTCEE 263
+ + P C ++G H+QC+ CER D T H+ + +G C E
Sbjct: 377 KEIGPGCDANGDRCHDQCVGGCERVNDATACHACKNVYHKGKCIE 421
>U50311-10|AAA92314.1| 135|Caenorhabditis elegans Inhibitor of
serine protease likeprotein protein 2, isoform a
protein.
Length = 135
Score = 25.4 bits (53), Expect(2) = 4.7
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +3
Query: 204 CERDKTHSDLKIVKEGTCEEADPCVCT 284
C ++T E TCE+ +P VCT
Sbjct: 80 CPENETFFGCGTACEATCEKPNPTVCT 106
Score = 20.6 bits (41), Expect(2) = 4.7
Identities = 7/23 (30%), Positives = 10/23 (43%)
Frame = +3
Query: 132 ACARNLRPVCGSDGKTYHNQCLL 200
+C P CG K QC++
Sbjct: 28 SCHNTCEPQCGYTPKACTEQCIM 50
>Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical
protein W05B2.2 protein.
Length = 1278
Score = 27.1 bits (57), Expect = 6.1
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = -3
Query: 297 GHI*RYRRKDRLPHTYPLSR--FSNRCASCPSR 205
G I R D P T+ +R +SNR + CPSR
Sbjct: 578 GRIIACERNDDCPSTHTCTRQLYSNRTSCCPSR 610
>Z74039-3|CAA98502.1| 410|Caenorhabditis elegans Hypothetical
protein K03B8.3 protein.
Length = 410
Score = 27.1 bits (57), Expect = 6.1
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +3
Query: 300 VCGTDGNTYPNKCSLECSRPL 362
+CG G T P+KCS EC PL
Sbjct: 268 LCGNGGYTNPSKCS-ECICPL 287
>Z81482-5|CAB03956.3| 409|Caenorhabditis elegans Hypothetical
protein C40H5.5 protein.
Length = 409
Score = 26.6 bits (56), Expect = 8.1
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +3
Query: 168 DGKTYHNQCL--LYCERDKTHSDLKIVKEG 251
DGK YHN CL C+ +SD V++G
Sbjct: 126 DGKYYHNNCLRCQMCDIPFEYSDKCYVRDG 155
>Z14092-9|CAA78474.1| 1429|Caenorhabditis elegans Hypothetical
protein R107.8 protein.
Length = 1429
Score = 26.6 bits (56), Expect = 8.1
Identities = 11/40 (27%), Positives = 18/40 (45%)
Frame = +3
Query: 231 LKIVKEGTCEEADPCVCTFIYAPVCGTDGNTYPNKCSLEC 350
L + ++ CE C+ T ++PVC +C EC
Sbjct: 405 LNMCQDFHCENDGTCMHTSDHSPVCQCKNGFIGKRCEKEC 444
>U72211-1|AAB97099.1| 409|Caenorhabditis elegans putative
transcription factor TTX-3 protein.
Length = 409
Score = 26.6 bits (56), Expect = 8.1
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +3
Query: 168 DGKTYHNQCL--LYCERDKTHSDLKIVKEG 251
DGK YHN CL C+ +SD V++G
Sbjct: 126 DGKYYHNNCLRCQMCDIPFEYSDKCYVRDG 155
>M12069-1|AAA70191.1| 1429|Caenorhabditis elegans protein (
C.elegans homeotic lin-12 protein gene, complete cds. ).
Length = 1429
Score = 26.6 bits (56), Expect = 8.1
Identities = 11/40 (27%), Positives = 18/40 (45%)
Frame = +3
Query: 231 LKIVKEGTCEEADPCVCTFIYAPVCGTDGNTYPNKCSLEC 350
L + ++ CE C+ T ++PVC +C EC
Sbjct: 405 LNMCQDFHCENDGTCMHTSDHSPVCQCKNGFIGKRCEKEC 444
>AF098500-1|AAC67400.2| 311|Caenorhabditis elegans Hypothetical
protein F43B10.1 protein.
Length = 311
Score = 26.6 bits (56), Expect = 8.1
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +3
Query: 351 SRPLAPSLEMKHRGECHEVKVADIQPCICT 440
+RP L++ H G ++ +D+QP I T
Sbjct: 152 TRPFMEKLDLSHLGPSDPLRDSDLQPAITT 181
>AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density
lipoprotein receptorrelated protein 2 protein.
Length = 2192
Score = 26.6 bits (56), Expect = 8.1
Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 5/59 (8%)
Frame = +3
Query: 117 LPSSCACARNLRPVCGSDGKTYHNQCLLYCERDKTHSD-----LKIVKEGTCEEADPCV 278
+P C L GSD K +C + C+ H+D K +G+ E+ + CV
Sbjct: 1006 IPKRRQCDGTLDCRDGSDEKGCKKECAIVCDNSCVHADDLCDGKKKCNDGSDEDEEACV 1064
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,211,065
Number of Sequences: 27780
Number of extensions: 218996
Number of successful extensions: 742
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 595
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 718
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 767282256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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