Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_N17
         (431 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58729-3|AAM54204.1|  955|Caenorhabditis elegans Hypothetical pr...    30   0.62 
U58729-2|AAM54203.1|  913|Caenorhabditis elegans Hypothetical pr...    30   0.62 
U58729-1|AAM54202.1|  928|Caenorhabditis elegans Hypothetical pr...    30   0.62 
AF456360-1|AAL60231.1|  928|Caenorhabditis elegans immunoglobuli...    30   0.62 
Z99171-7|CAB16312.1|  188|Caenorhabditis elegans Hypothetical pr...    30   0.82 
U58755-2|AAB00692.1|  362|Caenorhabditis elegans Hypothetical pr...    30   0.82 
AL032660-1|CAA21752.1|  711|Caenorhabditis elegans Hypothetical ...    29   1.9  
Z48009-12|CAA88089.1| 1137|Caenorhabditis elegans Hypothetical p...    28   3.3  
Z48007-3|CAA88054.1| 1137|Caenorhabditis elegans Hypothetical pr...    28   3.3  
U10414-9|AAA19072.1|  712|Caenorhabditis elegans Hypothetical pr...    27   4.4  
AL132859-6|CAB60493.3|  324|Caenorhabditis elegans Hypothetical ...    27   4.4  
AF016686-7|AAB66241.2|  664|Caenorhabditis elegans C-type lectin...    27   5.8  
U80444-2|AAB37788.1|  305|Caenorhabditis elegans Collagen protei...    27   7.7  

>U58729-3|AAM54204.1|  955|Caenorhabditis elegans Hypothetical
           protein F02G3.1c protein.
          Length = 955

 Score = 30.3 bits (65), Expect = 0.62
 Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = +3

Query: 294 ASSDPLKMRRALRIIQT-NSDISGDYTCVVSTXMDEDSKTKQMTVFV 431
           A SD   +   L II++ NS+ +G Y CV +  +  + +T  + VF+
Sbjct: 286 ARSDKHNVEEGLLIIESLNSEDAGTYKCVANNTVGSNERTFDLAVFL 332


>U58729-2|AAM54203.1|  913|Caenorhabditis elegans Hypothetical
           protein F02G3.1b protein.
          Length = 913

 Score = 30.3 bits (65), Expect = 0.62
 Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = +3

Query: 294 ASSDPLKMRRALRIIQT-NSDISGDYTCVVSTXMDEDSKTKQMTVFV 431
           A SD   +   L II++ NS+ +G Y CV +  +  + +T  + VF+
Sbjct: 259 ARSDKHNVEEGLLIIESLNSEDAGTYKCVANNTVGSNERTFDLAVFL 305


>U58729-1|AAM54202.1|  928|Caenorhabditis elegans Hypothetical
           protein F02G3.1a protein.
          Length = 928

 Score = 30.3 bits (65), Expect = 0.62
 Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = +3

Query: 294 ASSDPLKMRRALRIIQT-NSDISGDYTCVVSTXMDEDSKTKQMTVFV 431
           A SD   +   L II++ NS+ +G Y CV +  +  + +T  + VF+
Sbjct: 259 ARSDKHNVEEGLLIIESLNSEDAGTYKCVANNTVGSNERTFDLAVFL 305


>AF456360-1|AAL60231.1|  928|Caenorhabditis elegans immunoglobulin
           domain-containingprotein F02G3.1 protein.
          Length = 928

 Score = 30.3 bits (65), Expect = 0.62
 Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = +3

Query: 294 ASSDPLKMRRALRIIQT-NSDISGDYTCVVSTXMDEDSKTKQMTVFV 431
           A SD   +   L II++ NS+ +G Y CV +  +  + +T  + VF+
Sbjct: 259 ARSDKHNVEEGLLIIESLNSEDAGTYKCVANNTVGSNERTFDLAVFL 305


>Z99171-7|CAB16312.1|  188|Caenorhabditis elegans Hypothetical
           protein F47G4.8 protein.
          Length = 188

 Score = 29.9 bits (64), Expect = 0.82
 Identities = 9/33 (27%), Positives = 19/33 (57%)
 Frame = +3

Query: 156 TFNNDTSGLVVKWFFKSKSRLVYQWIVGQKPQD 254
           T    T GL+ +W + S+ + ++ W++G +  D
Sbjct: 131 TLRMGTRGLLTRWSYNSRKKAIFGWMMGPQVTD 163


>U58755-2|AAB00692.1|  362|Caenorhabditis elegans Hypothetical
           protein C34D4.10 protein.
          Length = 362

 Score = 29.9 bits (64), Expect = 0.82
 Identities = 14/28 (50%), Positives = 16/28 (57%)
 Frame = +3

Query: 228 WIVGQKPQDIGILRGRVDLTYRASSDPL 311
           W VG +  DIGI+R R D     S DPL
Sbjct: 210 WPVGVETCDIGIMRSRTDFKPLGSLDPL 237


>AL032660-1|CAA21752.1|  711|Caenorhabditis elegans Hypothetical
           protein Y70G10A.2 protein.
          Length = 711

 Score = 28.7 bits (61), Expect = 1.9
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +3

Query: 246 PQDIGILRGRVDLTYRASSDPL 311
           P+DIG L GR++L   A+ DPL
Sbjct: 614 PRDIGKLNGRLELVTLAAEDPL 635


>Z48009-12|CAA88089.1| 1137|Caenorhabditis elegans Hypothetical
           protein AH6.1 protein.
          Length = 1137

 Score = 27.9 bits (59), Expect = 3.3
 Identities = 15/67 (22%), Positives = 30/67 (44%)
 Frame = +3

Query: 63  HVIRGDKITKMVVPEIIQYGVEDAVILDCDYTFNNDTSGLVVKWFFKSKSRLVYQWIVGQ 242
           HV+    +T+M + ++     +   +   D+T+ N      V  F+K +   V+ +    
Sbjct: 411 HVVISPNLTRMPIFQLYGLNSDYDQVALVDFTYTNSVMVPNVTLFYKDEGGAVWSYYGHS 470

Query: 243 KPQDIGI 263
           +P DI I
Sbjct: 471 RPLDIPI 477


>Z48007-3|CAA88054.1| 1137|Caenorhabditis elegans Hypothetical
           protein AH6.1 protein.
          Length = 1137

 Score = 27.9 bits (59), Expect = 3.3
 Identities = 15/67 (22%), Positives = 30/67 (44%)
 Frame = +3

Query: 63  HVIRGDKITKMVVPEIIQYGVEDAVILDCDYTFNNDTSGLVVKWFFKSKSRLVYQWIVGQ 242
           HV+    +T+M + ++     +   +   D+T+ N      V  F+K +   V+ +    
Sbjct: 411 HVVISPNLTRMPIFQLYGLNSDYDQVALVDFTYTNSVMVPNVTLFYKDEGGAVWSYYGHS 470

Query: 243 KPQDIGI 263
           +P DI I
Sbjct: 471 RPLDIPI 477


>U10414-9|AAA19072.1|  712|Caenorhabditis elegans Hypothetical
           protein F42A10.1 protein.
          Length = 712

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 12/50 (24%), Positives = 24/50 (48%)
 Frame = +3

Query: 270 GRVDLTYRASSDPLKMRRALRIIQTNSDISGDYTCVVSTXMDEDSKTKQM 419
           G+  L    SS  LK+   + ++    ++ GD T V+   +  D+K + +
Sbjct: 216 GKTTLLKMISSQQLKIPAGISMLSVEQEVEGDDTLVLDAVLMSDTKRQTL 265


>AL132859-6|CAB60493.3|  324|Caenorhabditis elegans Hypothetical
           protein Y39C12A.7 protein.
          Length = 324

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 13/52 (25%), Positives = 26/52 (50%)
 Frame = -1

Query: 167 IVESIIAVQYNSIFYTVLDYFRDYHFCYLVSTYNMETGDKQKDCA*MRQRHT 12
           I+  ++  Q+++ FY  L  F      Y+V+  N +      +C+ +R+ HT
Sbjct: 130 IISVLVCTQFSTTFYPFLVLFMSNIISYIVNIINYKLNRYYYNCS-LRKLHT 180


>AF016686-7|AAB66241.2|  664|Caenorhabditis elegans C-type lectin
           protein 44 protein.
          Length = 664

 Score = 27.1 bits (57), Expect = 5.8
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -1

Query: 98  YHFCYLVSTYNMETGDKQKDC 36
           +HFCY V+TY +   D ++ C
Sbjct: 265 FHFCYSVNTYLLSEPDAREFC 285


>U80444-2|AAB37788.1|  305|Caenorhabditis elegans Collagen protein
           58 protein.
          Length = 305

 Score = 26.6 bits (56), Expect = 7.7
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +2

Query: 83  DNKNGSPGNNPIRCRR 130
           D K G+PGNN +R RR
Sbjct: 214 DGKPGNPGNNGVRVRR 229


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,969,657
Number of Sequences: 27780
Number of extensions: 196373
Number of successful extensions: 574
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 537
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 574
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 724655464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)