Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_N17
         (431 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              25   0.48 
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    25   0.48 
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    24   0.63 
L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein pro...    21   4.5  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   4.5  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   4.5  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          21   4.5  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   5.9  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   5.9  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 24.6 bits (51), Expect = 0.48
 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
 Frame = +3

Query: 297  SSDPLKM--RRALRIIQTNSDISGDYTCVVSTXMDEDSKTKQMTV 425
            SSD L+     +L I + +   +G+Y+C V      D+ T Q+ V
Sbjct: 1319 SSDRLRQLPEGSLFIKEVDRTDAGEYSCYVENTFGHDTVTHQLIV 1363



 Score = 21.0 bits (42), Expect = 5.9
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +3

Query: 327 LRIIQTNSDISGDYTCVVSTXMDEDSKTKQMTV 425
           L I +   + SG Y C+V+  +  +S    +TV
Sbjct: 272 LIIREARVEDSGKYLCIVNNSVGGESVETVLTV 304


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 24.6 bits (51), Expect = 0.48
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +3

Query: 327 LRIIQTNSDISGDYTCVVSTXMDEDSKTKQMTVFV 431
           L I   + D +G+Y+CV      E S T+++ V V
Sbjct: 670 LMIEHLSPDHNGNYSCVARNLAAEVSHTQRLVVHV 704



 Score = 23.4 bits (48), Expect = 1.1
 Identities = 12/35 (34%), Positives = 14/35 (40%)
 Frame = +3

Query: 327  LRIIQTNSDISGDYTCVVSTXMDEDSKTKQMTVFV 431
            L +    S   GDYTC V      D     +TV V
Sbjct: 1365 LMLSNLQSQDGGDYTCQVENAQGNDKLHYTLTVQV 1399


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 24.2 bits (50), Expect = 0.63
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +3

Query: 327 LRIIQTNSDISGDYTCVVSTXMDEDSKTKQMTVFV 431
           L I    ++ SGDYTCV +    E   T ++ V V
Sbjct: 674 LSITNLAAEHSGDYTCVAANPAAEVRYTAKLQVKV 708



 Score = 23.4 bits (48), Expect = 1.1
 Identities = 12/35 (34%), Positives = 14/35 (40%)
 Frame = +3

Query: 327  LRIIQTNSDISGDYTCVVSTXMDEDSKTKQMTVFV 431
            L +    S   GDYTC V      D     +TV V
Sbjct: 1369 LMLSNLQSQDGGDYTCQVENAQGNDKLHYTLTVQV 1403


>L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein
           protein.
          Length = 69

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = -2

Query: 217 NLDFDLKNHFTTRP 176
           +L++ L+NHF ++P
Sbjct: 3   HLEYHLRNHFGSKP 16


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 134 SIFYTVLDYFRDY 96
           SI+ T+LDY+  Y
Sbjct: 419 SIYKTILDYYHKY 431


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 134 SIFYTVLDYFRDY 96
           SI+ T+LDY+  Y
Sbjct: 419 SIYKTILDYYHKY 431


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 134 SIFYTVLDYFRDY 96
           SI+ T+LDY+  Y
Sbjct: 45  SIYKTILDYYHKY 57


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -2

Query: 259 PIS*GFCPTIH*YTNLDFDLKNHFTTRP 176
           PI+ GF  TI     + F  +N F++ P
Sbjct: 292 PINSGFYSTIMYSNGVTFPQRNRFSSLP 319


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -2

Query: 259 PIS*GFCPTIH*YTNLDFDLKNHFTTRP 176
           PI+ GF  TI     + F  +N F++ P
Sbjct: 292 PINSGFYSTIMYSNGVTFPQRNRFSSLP 319


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,921
Number of Sequences: 438
Number of extensions: 2713
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11244597
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)