Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_N13
         (609 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    23   1.5  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   6.1  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    21   6.1  

>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = +3

Query: 138 SPRTNATRVSSTPSSAFPRSRVCSHSGVVTSP 233
           S  T   + + TP S      VC+  G+V  P
Sbjct: 421 SSTTQKPQTTKTPESGNESDGVCTKEGIVRDP 452


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = -2

Query: 236 HWRSYHARMRADPAPWECGR 177
           H   YH R  A   P++C +
Sbjct: 244 HHLEYHLRNHAGSKPFQCNK 263


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = -2

Query: 236 HWRSYHARMRADPAPWECGR 177
           H   YH R  A   P++C +
Sbjct: 2   HHLEYHLRNHAGSKPFQCNK 21


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,456
Number of Sequences: 336
Number of extensions: 2200
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15457268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)