Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_N13
(609 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 204 1e-53
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 76 5e-15
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 72 6e-14
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 72 8e-14
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 58 1e-09
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 50 3e-07
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 48 8e-07
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 48 1e-06
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 43 3e-05
SPBC83.13 |||mitochondrial tricarboxylic acid transporter|Schizo... 43 4e-05
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 40 3e-04
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 38 0.001
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo... 37 0.002
SPAC823.10c |||mitochondrial carrier with solute carrier repeats... 37 0.003
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 35 0.008
SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccha... 33 0.033
SPBC29A3.11c |||mitochondrial carboxylic acid transporter|Schizo... 33 0.033
SPBC19F5.02c |||U3 snoRNP protein Utp4 |Schizosaccharomyces pomb... 31 0.17
SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr 2... 31 0.17
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 30 0.23
SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|ch... 28 1.2
SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces p... 27 1.6
SPAC23E2.02 |lsd2|swm2, saf140|histone demethylase SWIRM2 |Schiz... 27 1.6
SPBC1271.11 |||tricarboxylate transporter |Schizosaccharomyces p... 26 3.7
SPBC56F2.04 |utp20||U3 snoRNP protein Utp20|Schizosaccharomyces ... 25 6.5
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 204 bits (497), Expect = 1e-53
Identities = 104/195 (53%), Positives = 129/195 (66%), Gaps = 3/195 (1%)
Frame = +2
Query: 26 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAE-DQRYKGIVDAFVRIPKEQG 202
F DF+ GG+SAAVSKTA APIERVKLL+Q Q + RYKGI + F R E+G
Sbjct: 27 FFFDFMMGGVSAAVSKTAAAPIERVKLLIQNQDEMIRAGRLSHRYKGIGECFKRTAAEEG 86
Query: 203 LLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFWRYFXXXXXXXXXXXXT 382
++S WRGN ANV+RYFPTQALNFAFKDK+K++F G + + ++F
Sbjct: 87 VISLWRGNTANVLRYFPTQALNFAFKDKFKKMF-GYKKERDGYAKWFAGNLASGGAAGAA 145
Query: 383 SLCFVYPLDFARTRLAADV--GKGDGQREFTGLGNCISKIFKSDGLTGLYRGFGVSVQGI 556
SL FVY LD+ARTRLA D K G+R+F GL + K ++SDGL GLYRGFG SV GI
Sbjct: 146 SLLFVYSLDYARTRLANDAKSAKKGGERQFNGLVDVYRKTYRSDGLRGLYRGFGPSVVGI 205
Query: 557 IIYRAAYFGFYDTAR 601
++YR YFG YDT +
Sbjct: 206 VVYRGLYFGMYDTLK 220
Score = 45.6 bits (103), Expect = 6e-06
Identities = 39/174 (22%), Positives = 69/174 (39%)
Frame = +2
Query: 26 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRIPKEQGL 205
FA + +GG + A S V ++ + L S + ++++ G+VD + + + GL
Sbjct: 132 FAGNLASGGAAGAASLLFVYSLDYARTRLANDAKSAKKGGERQFNGLVDVYRKTYRSDGL 191
Query: 206 LSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFWRYFXXXXXXXXXXXXTS 385
+RG +V+ + L F D K V L G F F S
Sbjct: 192 RGLYRGFGPSVVGIVVYRGLYFGMYDTLKPVVLVG-PLEGNFLASFLLGWAVTTGSGVAS 250
Query: 386 LCFVYPLDFARTRLAADVGKGDGQREFTGLGNCISKIFKSDGLTGLYRGFGVSV 547
YPLD R R+ G+ +++ C +I +G ++G G ++
Sbjct: 251 ----YPLDTIRRRMMMTSGEA---VKYSSSFECGRQILAKEGARSFFKGAGANI 297
Score = 27.5 bits (58), Expect = 1.6
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +2
Query: 464 FTGLGNCISKIFKSDGLTGLYRGFGVSVQGIIIYRAAYFGFYDTARGM 607
+ G+G C + +G+ L+RG +V +A F F D + M
Sbjct: 71 YKGIGECFKRTAAEEGVISLWRGNTANVLRYFPTQALNFAFKDKFKKM 118
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 75.8 bits (178), Expect = 5e-15
Identities = 47/133 (35%), Positives = 70/133 (52%), Gaps = 1/133 (0%)
Frame = +2
Query: 41 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRIPKEQGLLSFWR 220
L+GG++A VS+TAV+P+ER+K++ QVQ+ ++ Y + V+I +GL+ F+R
Sbjct: 25 LSGGVAATVSRTAVSPLERMKIIFQVQN-------NKEYTSLTSTLVKIWNREGLIGFFR 77
Query: 221 GNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFWRYFXXXXXXXXXXXXTSLC-FV 397
GN N +R FP A+ FA + KQ L KN + C
Sbjct: 78 GNGTNCLRAFPYGAVQFATFNMLKQRAL----KNRSHQNLENHERLLFGAIAGAASCATT 133
Query: 398 YPLDFARTRLAAD 436
YPLD ARTRL+ +
Sbjct: 134 YPLDIARTRLSIE 146
Score = 42.3 bits (95), Expect = 5e-05
Identities = 25/87 (28%), Positives = 42/87 (48%)
Frame = +2
Query: 11 ADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRIP 190
AD AF K FL GG + + +T P + ++ QV + YK I A I
Sbjct: 222 ADLTAFQKLFL-GGFTGIIGQTLTFPADVLRRRFQVNRIP---GIGHNYKNIKSAIFHIY 277
Query: 191 KEQGLLSFWRGNFANVIRYFPTQALNF 271
K +G+ F+RG +N+++ P ++ +
Sbjct: 278 KTEGINGFFRGYSSNMLKIIPVMSITW 304
Score = 36.7 bits (81), Expect = 0.003
Identities = 32/141 (22%), Positives = 57/141 (40%)
Frame = +2
Query: 185 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFWRYFXXXXXXX 364
+ E G + + G A ++ P ++ F + KQ F D T F + F
Sbjct: 180 VQHEGGYPALYNGLPATLLNVVPYVSICFFTFEFCKQKFFSNADL-TAFQKLFLGGFTGI 238
Query: 365 XXXXXTSLCFVYPLDFARTRLAADVGKGDGQREFTGLGNCISKIFKSDGLTGLYRGFGVS 544
T +P D R R + G G + + + I I+K++G+ G +RG+ +
Sbjct: 239 IGQTLT-----FPADVLRRRFQVNRIPGIGHN-YKNIKSAIFHIYKTEGINGFFRGYSSN 292
Query: 545 VQGIIIYRAAYFGFYDTARGM 607
+ II + + Y+T M
Sbjct: 293 MLKIIPVMSITWYTYETVSKM 313
Score = 31.5 bits (68), Expect = 0.100
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +2
Query: 458 REFTGLGNCISKIFKSDGLTGLYRGFGVSVQGIIIYRAAYFGFYD 592
+E+T L + + KI+ +GL G +RG G + Y A F ++
Sbjct: 54 KEYTSLTSTLVKIWNREGLIGFFRGNGTNCLRAFPYGAVQFATFN 98
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 72.1 bits (169), Expect = 6e-14
Identities = 57/200 (28%), Positives = 90/200 (45%), Gaps = 11/200 (5%)
Frame = +2
Query: 32 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRIPKEQGLLS 211
K +AGG + V+K+ VAP++RVK+L Q H S + R+ G+ A I GL
Sbjct: 19 KSGIAGGTAGCVAKSVVAPLDRVKILYQTNHASYRGYAYSRH-GLYKAIKHIYHVYGLHG 77
Query: 212 FWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFWRYFXXXXXXXXXXXXTSLC 391
++G+ A + R FP + F ++ ++V + + T R+ S+
Sbjct: 78 LYQGHTATLYRVFPYAGIKFVAYEQVRRVLIRDPEHETHARRFLSGSLAGT-----CSVF 132
Query: 392 FVYPLDFARTRLA--ADVGKGDGQREFT-GLGN-----CISK---IFKSDGLTGLYRGFG 538
F YPL+ R RLA + GK + T + + C K + + + YRGF
Sbjct: 133 FTYPLELIRVRLAYITNTGKNPTLTQVTKDIFHERDFLCNKKYPGLSRLSKICNFYRGFS 192
Query: 539 VSVQGIIIYRAAYFGFYDTA 598
V++ GI Y F YD A
Sbjct: 193 VTLTGIFPYAGMSFLAYDLA 212
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 71.7 bits (168), Expect = 8e-14
Identities = 47/194 (24%), Positives = 92/194 (47%), Gaps = 1/194 (0%)
Frame = +2
Query: 14 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRIPK 193
DP F++GGI+ VS+T AP++R+K++L + + + + ++ +
Sbjct: 123 DPKNNVGYFISGGIAGIVSRTCTAPLDRLKVML-ISDTGSKPSPKYPFATLLHTTKVLWN 181
Query: 194 EQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFWRYFXXXXXXXXXX 373
G+ SF+ GN NV++ P ++ F + K+V G+ +++
Sbjct: 182 RNGIRSFFVGNGINVLKVMPESSIKFGTYEAMKRVL--GISSSSENHSPLYSYLAGGMAG 239
Query: 374 XXTSLCFVYPLDFARTRL-AADVGKGDGQREFTGLGNCISKIFKSDGLTGLYRGFGVSVQ 550
+ F+YP+D + R+ +D+ +G + L N +++KS G+ G YRG V +
Sbjct: 240 SVAQM-FIYPVDTLKFRIQCSDLSRGQHGKSII-LSNA-KELYKSVGIRGYYRGVLVGIL 296
Query: 551 GIIIYRAAYFGFYD 592
G+ Y A G ++
Sbjct: 297 GMFPYSATDLGTFE 310
Score = 52.0 bits (119), Expect = 7e-08
Identities = 41/172 (23%), Positives = 75/172 (43%), Gaps = 7/172 (4%)
Frame = +2
Query: 38 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVR-IPKEQGLLSF 214
+LAGG++ +V++ + P++ +K +Q +S+ Q K I+ + + + K G+ +
Sbjct: 232 YLAGGMAGSVAQMFIYPVDTLKFRIQCSDLSR----GQHGKSIILSNAKELYKSVGIRGY 287
Query: 215 WRGNFANVIRYFPTQALNFAFKDKYKQVFLG------GVDKNTQFWRYFXXXXXXXXXXX 376
+RG ++ FP A + + K+ ++G VD
Sbjct: 288 YRGVLVGILGMFPYSATDLGTFEGLKRTWIGILASRDNVDPQ-DVKLPNGLVMAFGALSG 346
Query: 377 XTSLCFVYPLDFARTRLAADVGKGDGQREFTGLGNCISKIFKSDGLTGLYRG 532
T V+PL+ RTRL G + G +C K K++G GLY+G
Sbjct: 347 STGATIVFPLNVIRTRLQTQ-GTSAHPATYDGFIDCFYKTTKNEGFRGLYKG 397
Score = 42.3 bits (95), Expect = 5e-05
Identities = 21/83 (25%), Positives = 40/83 (48%)
Frame = +2
Query: 47 GGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRIPKEQGLLSFWRGN 226
G +S + T V P+ ++ LQ Q S A Y G +D F + K +G ++G
Sbjct: 342 GALSGSTGATIVFPLNVIRTRLQTQGTS---AHPATYDGFIDCFYKTTKNEGFRGLYKGL 398
Query: 227 FANVIRYFPTQALNFAFKDKYKQ 295
N+++ P+ A+++ + K+
Sbjct: 399 SPNLLKVAPSVAISYLVYENCKK 421
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 58.0 bits (134), Expect = 1e-09
Identities = 47/196 (23%), Positives = 78/196 (39%)
Frame = +2
Query: 14 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRIPK 193
D + F F AG ++ + P++ VK +Q+ V K Y G D +I K
Sbjct: 4 DNIPFPVTFAAGAVAGISEVLTLYPLDVVKTRMQLS-VGKS-----DYNGTFDCLKKIVK 57
Query: 194 EQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFWRYFXXXXXXXXXX 373
+G +RG ++ P +AL FA D Y +++ +
Sbjct: 58 NEGPHRLYRGILPPILMEAPKRALKFASNDTYSKLWRKVFKRKDSSP---ALSILTGSCA 114
Query: 374 XXTSLCFVYPLDFARTRLAADVGKGDGQREFTGLGNCISKIFKSDGLTGLYRGFGVSVQG 553
T V P + + RL DV ++ G +C +KI K + + LY GF ++
Sbjct: 115 GFTETFVVVPFELMKIRLQ-DVKNAS---KYNGTVDCFTKIVKQERILALYNGFEATMWR 170
Query: 554 IIIYRAAYFGFYDTAR 601
+++ A YFG R
Sbjct: 171 HVVWNAGYFGVIQKIR 186
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 50.0 bits (114), Expect = 3e-07
Identities = 44/185 (23%), Positives = 79/185 (42%), Gaps = 12/185 (6%)
Frame = +2
Query: 38 FLAGGISAAVSKTAVAPIERVKLLLQVQHVS----KQIAEDQR-----YKGIVDAFV--- 181
F+AGG++ + A AP++ VK LQ KQ A+ + Y+ +D +
Sbjct: 52 FIAGGVAGMLGAIATAPLDVVKTRLQSDFYKDRFLKQTAKSKSPLTAAYRHFMDTCIILK 111
Query: 182 RIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFWRYFXXXXXX 361
+ +G + +RG N+I P +++NF K++ L + N Q
Sbjct: 112 NVKVHEGTRALFRGLGPNLIGTIPARSINFFSYGNGKRI-LADLFNNGQENSQIHLMAAA 170
Query: 362 XXXXXXTSLCFVYPLDFARTRLAADVGKGDGQREFTGLGNCISKIFKSDGLTGLYRGFGV 541
++ P+ +TRL D G + + + +CI K + +G GLY+G
Sbjct: 171 IAGVITSAA--TNPIWLVKTRLQLDKKSGQAAQYRSSI-DCIIKTIRLEGFRGLYKGLSA 227
Query: 542 SVQGI 556
S+ G+
Sbjct: 228 SLLGV 232
Score = 45.2 bits (102), Expect = 8e-06
Identities = 42/193 (21%), Positives = 77/193 (39%), Gaps = 9/193 (4%)
Frame = +2
Query: 41 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRIPKEQGLLSFWR 220
+A I+ ++ A PI VK LQ+ S Q A+ Y+ +D ++ + +G ++
Sbjct: 167 MAAAIAGVITSAATNPIWLVKTRLQLDKKSGQAAQ---YRSSIDCIIKTIRLEGFRGLYK 223
Query: 221 GNFANVIRYFPTQALNFAFKDKYKQVF----LGGVDKNTQFWRY-----FXXXXXXXXXX 373
G A+++ + L + +K+K L + Q Y +
Sbjct: 224 GLSASLLGVGES-TLQWVLYEKFKHAVAIRQLRRKELGIQETIYDKVLDWGGKLGGAGIA 282
Query: 374 XXTSLCFVYPLDFARTRLAADVGKGDGQREFTGLGNCISKIFKSDGLTGLYRGFGVSVQG 553
+ YP + RTRL +G ++TGL C ++ G+ GLY G +
Sbjct: 283 KFMAAGIAYPHEVVRTRLRQSPSI-NGTPKYTGLIQCFKLVWMEQGIVGLYGGLTAHLLR 341
Query: 554 IIIYRAAYFGFYD 592
++ FG Y+
Sbjct: 342 VVPNACILFGSYE 354
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 48.4 bits (110), Expect = 8e-07
Identities = 38/186 (20%), Positives = 80/186 (43%), Gaps = 1/186 (0%)
Frame = +2
Query: 41 LAGGISAAVSKTAVAPIERVKLLLQVQH-VSKQIAEDQRYKGIVDAFVRIPKEQGLLSFW 217
LAG S + + + P++ +K +Q+ + VS+ ++ + IV++ ++I +G+ S W
Sbjct: 24 LAGAFSGILEHSVMYPVDAIKTRMQMLNGVSRSVSGN-----IVNSVIKISSTEGVYSLW 78
Query: 218 RGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFWRYFXXXXXXXXXXXXTSLCFV 397
RG + ++ P+ A+ F+ + +K D+ S F+
Sbjct: 79 RGISSVIMGAGPSHAIYFSVLEFFKSKINASPDRPL-------ASALAGACAITISDAFM 131
Query: 398 YPLDFARTRLAADVGKGDGQREFTGLGNCISKIFKSDGLTGLYRGFGVSVQGIIIYRAAY 577
P D + R+ R++ +C + +F+++GL Y + + I + A
Sbjct: 132 TPFDVIKQRMQLP------SRKYKSALHCATTVFRNEGLGAFYISYPTCIAMSIPFTAIQ 185
Query: 578 FGFYDT 595
YDT
Sbjct: 186 VATYDT 191
Score = 45.6 bits (103), Expect = 6e-06
Identities = 28/96 (29%), Positives = 53/96 (55%)
Frame = +2
Query: 41 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRIPKEQGLLSFWR 220
++GG+S A++ + P++ VK LLQ + S I E ++ KG +D I G+ SF++
Sbjct: 209 ISGGLSGAIASSLTTPLDVVKTLLQTRG-SSSIPEVRKCKGSLDVVRFIYNYGGIPSFFK 267
Query: 221 GNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQ 328
G ++ P A+++A + K++ + V K +Q
Sbjct: 268 GIRPRMVVAMPATAVSWAAYEAGKEILI-RVSKTSQ 302
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 48.0 bits (109), Expect = 1e-06
Identities = 50/190 (26%), Positives = 79/190 (41%), Gaps = 5/190 (2%)
Frame = +2
Query: 23 AFAKDFLAGGISAAVSKTAVA-PIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRIPKEQ 199
+F KDFLA G+S V++ V P + VK+ LQ Q I Y +D +I K +
Sbjct: 16 SFTKDFLA-GVSGGVAQVLVGQPFDCVKVRLQSQSNVSPI-----YNNALDCVKKISKNE 69
Query: 200 GLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFWRYFXXXXXXXXXXXX 379
GL +F++G ++ ++ F + K+ F T Y
Sbjct: 70 GLAAFYKGTVLPLLGIGFCVSIQFTTFEYCKRFFSRDGTPVTMPQYYVSGAISGLANSF- 128
Query: 380 TSLCFVYPLDFARTRLAADVGKGDGQREFTGLGNCISKIFKSDGLTGLYRGFGVS----V 547
V P++ R RL GK + G +CI KI GL+G+ +G+ +
Sbjct: 129 ----LVGPVEHVRIRLQIQTGK---NVLYHGPWDCIKKISSQYGLSGIMKGYNPTAAREA 181
Query: 548 QGIIIYRAAY 577
G+ +Y AY
Sbjct: 182 HGLGMYFLAY 191
Score = 40.3 bits (90), Expect = 2e-04
Identities = 44/197 (22%), Positives = 73/197 (37%), Gaps = 4/197 (2%)
Frame = +2
Query: 17 PVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRIPKE 196
PV + +++G IS + V P+E V++ LQ+Q K + Y G D +I +
Sbjct: 109 PVTMPQYYVSGAISGLANSFLVGPVEHVRIRLQIQ-TGKNVL----YHGPWDCIKKISSQ 163
Query: 197 QGLLSFWRGNFANVIRYFPTQALNF-AFKDKYKQVFLGG--VDKN-TQFWRYFXXXXXXX 364
GL +G R + F A++ K D++ T W+
Sbjct: 164 YGLSGIMKGYNPTAAREAHGLGMYFLAYEALVKNTMAKHHLTDRSQTPGWKLCVFGAGAG 223
Query: 365 XXXXXTSLCFVYPLDFARTRLAADVGKGDGQREFTGLGNCISKIFKSDGLTGLYRGFGVS 544
+ YP D ++++ D + + C I+ GL G YRGF
Sbjct: 224 YAMWLAA----YPFDIVKSKIQTDGFL--SKATYKNSWQCAKGIYTKAGLRGFYRGFVPV 277
Query: 545 VQGIIIYRAAYFGFYDT 595
+ A F Y+T
Sbjct: 278 LVRAAPANAVTFYVYET 294
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 43.2 bits (97), Expect = 3e-05
Identities = 47/183 (25%), Positives = 71/183 (38%)
Frame = +2
Query: 41 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRIPKEQGLLSFWR 220
LAGGIS+ + + +AP + +K+ +Q+ S + F +++G+ + WR
Sbjct: 21 LAGGISSVICRFMIAPFDVIKIRMQITQSS-----------LRPVFKETVQKEGVRALWR 69
Query: 221 GNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFWRYFXXXXXXXXXXXXTSLCFVY 400
GN + Y A F K K + + N F TS Y
Sbjct: 70 GNVVAELLYLVYGAAEFVAFSKLKHL-TENLAMNDHAVN-FLCGTSAGIFATLTS----Y 123
Query: 401 PLDFARTRLAADVGKGDGQREFTGLGNCISKIFKSDGLTGLYRGFGVSVQGIIIYRAAYF 580
PLD RT+ A+ K T KI+ G+ G + G SV I Y +F
Sbjct: 124 PLDTMRTKFAS-YAKTPHMLPAT------KKIYAEAGIKGFFPGLKFSVIQIGPYAGCFF 176
Query: 581 GFY 589
FY
Sbjct: 177 MFY 179
Score = 28.3 bits (60), Expect = 0.93
Identities = 19/71 (26%), Positives = 32/71 (45%)
Frame = +2
Query: 41 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRIPKEQGLLSFWR 220
L+G I+ A SK + P++ V LQ YK D F+ I + G+ +R
Sbjct: 197 LSGVIAGAGSKAIMFPVDTVVKTLQTF--------PSNYKSFKDCFLSIYRNSGIKGLYR 248
Query: 221 GNFANVIRYFP 253
G ++++ P
Sbjct: 249 GLSVSMLKVAP 259
>SPBC83.13 |||mitochondrial tricarboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 293
Score = 42.7 bits (96), Expect = 4e-05
Identities = 45/163 (27%), Positives = 65/163 (39%), Gaps = 4/163 (2%)
Frame = +2
Query: 128 SKQIAEDQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFA---FKDKYKQV 298
+KQ A Q KG F + KE+G+ RG A +R A F +K +
Sbjct: 134 AKQAATGQEVKGTFRVFADLYKEKGIRGINRGVNAVALRQMTNWGSRLALSRFLEKPIRY 193
Query: 299 FLGGVDKNTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADVGKGDGQREFTGLG 478
F G T+ C+ PL+ AR + + + KG Q G+
Sbjct: 194 FTG----RTEAEPLTTGQRFVASVSAGALSCWNQPLEVARVEMQS-LTKGI-QHSSPGIM 247
Query: 479 NCISKIFKSDGLTGLYRGFGVSVQGIIIYRAAYFGFY-DTARG 604
I I+K++G+ GLYRG V G+ Y+ F D RG
Sbjct: 248 QTIMSIYKNNGIKGLYRG-AVPRMGLGAYQTFVMVFLADCVRG 289
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 39.9 bits (89), Expect = 3e-04
Identities = 40/193 (20%), Positives = 74/193 (38%), Gaps = 3/193 (1%)
Frame = +2
Query: 38 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQR-YKGIVDAFVRIPKEQGLLSF 214
FL+GG++A + T P E +K Q+Q ++ +R YK + AF I + +G+
Sbjct: 27 FLSGGLAACGAVTLTNPFEVIKTRFQLQGQLTKLDPSKRIYKSVGQAFSLIARHEGIRGL 86
Query: 215 WRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFWRYFXXXXXXXXXXXXTSLCF 394
RG + F + ++ L + F
Sbjct: 87 QRGLGTAYVYQICLNGCRLGFYEPIRRT-LNTWFLDDPKGNKLAINVASGAGSGLCGALF 145
Query: 395 VYPLDFARTRLAADVGKGD-GQR-EFTGLGNCISKIFKSDGLTGLYRGFGVSVQGIIIYR 568
P +TR+ + K GQ+ + + N S+I K +G+ GL+ G ++ +
Sbjct: 146 GSPFFLVKTRMQSYSPKFPVGQQYGYKHIFNAFSRIIKENGVKGLFVGADAAILRTVSGS 205
Query: 569 AAYFGFYDTARGM 607
+ Y+ A+ M
Sbjct: 206 SVQLPIYNWAKRM 218
Score = 34.7 bits (76), Expect = 0.011
Identities = 34/158 (21%), Positives = 58/158 (36%)
Frame = +2
Query: 83 APIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQA 262
+P VK +Q + + YK I +AF RI KE G+ + G A ++R +
Sbjct: 147 SPFFLVKTRMQSYSPKFPVGQQYGYKHIFNAFSRIIKENGVKGLFVGADAAILRTVSGSS 206
Query: 263 LNFAFKDKYKQVFLGGVDKNTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADVG 442
+ + K++ ++ C + D TR+
Sbjct: 207 VQLPIYNWAKRM----IEHYNLLEEGMIKHLTASAVSGFGVCCTMQIFDTVMTRMYNQKN 262
Query: 443 KGDGQREFTGLGNCISKIFKSDGLTGLYRGFGVSVQGI 556
K + +CI K +S+G LY+GFG + I
Sbjct: 263 K----ELYKNPIDCILKTIRSEGFFALYKGFGAHLARI 296
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 37.9 bits (84), Expect = 0.001
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 3/99 (3%)
Frame = +2
Query: 32 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQR---YKGIVDAFVRIPKEQG 202
KD +AGG + S VAP++ VK Q Q + G + + I +G
Sbjct: 7 KDAIAGGAAGLASSLVVAPLDVVKTRKQAQKAFYSTGGGKNTMVLGGTLSSMRTIFHNEG 66
Query: 203 LLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDK 319
+ +RG ++ Y P+ ++ F +K K +F GV+K
Sbjct: 67 IAGLYRGVGPMMLGYLPSWSIYFVVYEKCKVLF--GVNK 103
Score = 37.1 bits (82), Expect = 0.002
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 5/74 (6%)
Frame = +2
Query: 395 VYPLDFARTRLAAD-----VGKGDGQREFTGLGNCISKIFKSDGLTGLYRGFGVSVQGII 559
V PLD +TR A G G G + + IF ++G+ GLYRG G + G +
Sbjct: 23 VAPLDVVKTRKQAQKAFYSTGGGKNTMVLGGTLSSMRTIFHNEGIAGLYRGVGPMMLGYL 82
Query: 560 IYRAAYFGFYDTAR 601
+ YF Y+ +
Sbjct: 83 PSWSIYFVVYEKCK 96
Score = 29.1 bits (62), Expect = 0.53
Identities = 23/91 (25%), Positives = 34/91 (37%)
Frame = +2
Query: 155 YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFW 334
Y DAF +I K +GL +F+RG F ++ + F + +K K + F
Sbjct: 230 YNNTFDAFRKIYKYEGLAAFYRGLFPSLFGTLHV-GIQFPLYEYFKSFLDDFFGKKSNFH 288
Query: 335 RYFXXXXXXXXXXXXTSLCFVYPLDFARTRL 427
T YP + RTRL
Sbjct: 289 IVLAATLSKIAASTVT-----YPHEVLRTRL 314
>SPAC19G12.05 |||mitochondrial citrate
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 37.1 bits (82), Expect = 0.002
Identities = 22/87 (25%), Positives = 38/87 (43%)
Frame = +2
Query: 38 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRIPKEQGLLSFW 217
FL G ++ ++ PI+ VK +Q SK+ YK + +I + GLL FW
Sbjct: 207 FLVGSVAGIITVYCTQPIDTVKSRMQSLSASKE------YKNSIHCAYKILTQDGLLRFW 260
Query: 218 RGNFANVIRYFPTQALNFAFKDKYKQV 298
G + R + + F +K ++
Sbjct: 261 SGATPRLARLILSGGIVFTVYEKVMEI 287
>SPAC823.10c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 36.7 bits (81), Expect = 0.003
Identities = 39/194 (20%), Positives = 76/194 (39%)
Frame = +2
Query: 20 VAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRIPKEQ 199
V +K AG + +S T + P++ +K Q Q D K + + E
Sbjct: 12 VKSSKHLAAGALGGFISSTTLQPLDLLKTRCQ------QSQRDSLPKMVRRIILH---EG 62
Query: 200 GLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFWRYFXXXXXXXXXXXX 379
G+ S W+G +++R + F F + + KN +
Sbjct: 63 GVFSLWKGTLPSILRSTTGSSCYFYFLNWLRH--FAPQSKNIAS-SHIQNLWMGGFARAA 119
Query: 380 TSLCFVYPLDFARTRLAADVGKGDGQREFTGLGNCISKIFKSDGLTGLYRGFGVSVQGII 559
F+ P+ + R +++ +T + + I I+K +G++G +RGFGV+
Sbjct: 120 VGFAFM-PVTVIKVRYESNL------YSYTTIYSSIRDIWKKEGISGFFRGFGVTALRDA 172
Query: 560 IYRAAYFGFYDTAR 601
+ Y FY+ ++
Sbjct: 173 PHAGLYVYFYELSK 186
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 35.1 bits (77), Expect = 0.008
Identities = 42/194 (21%), Positives = 80/194 (41%), Gaps = 4/194 (2%)
Frame = +2
Query: 38 FLAGGISAAV-SKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRIPKEQGLLSF 214
+LA SA + + + P+E +K+ +VQ + + A R +A+ +I +G +
Sbjct: 123 YLAASASAELLADIMLCPMEAIKV--RVQTSNPRFANTTR-----EAWSKIVTNEGFGTL 175
Query: 215 WRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFWRYFXXXXXXXXXXXXTS-LC 391
+RG R P + FA ++ + + K + LC
Sbjct: 176 YRGLAPLWFRQIPYTMMKFASFERIVEALYTYIGKPKNMYSKAEKIGISFAGGYMAGVLC 235
Query: 392 FV--YPLDFARTRLAADVGKGDGQREFTGLGNCISKIFKSDGLTGLYRGFGVSVQGIIIY 565
+ +P D ++L ++ G+G G ++I+K G +GL+ G GV + I
Sbjct: 236 AIISHPADVMVSKLNSNKKAGEGA------GAAAARIYKEIGFSGLWNGLGVRIVMIGTL 289
Query: 566 RAAYFGFYDTARGM 607
A + YD+ + M
Sbjct: 290 TGAQWLIYDSFKIM 303
Score = 27.5 bits (58), Expect = 1.6
Identities = 35/167 (20%), Positives = 61/167 (36%), Gaps = 3/167 (1%)
Frame = +2
Query: 41 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRIPKEQGLLSFWR 220
L G ++ + +A+ P++ +K QV Y G + F I ++GL +
Sbjct: 28 LGGLLACGTTHSAITPLDLIKCRKQVN--------PNIYPGNIAGFKTILSKEGLRGLYT 79
Query: 221 GNFANVIRYFPTQALNFAFKD--KYKQVFLGGVDKNTQF-WRYFXXXXXXXXXXXXTSLC 391
G +I Y + F + K+K L G K ++ + LC
Sbjct: 80 GGMPTLIGYSLQGCGKYGFYELFKHKYSTLVGAQKAHEYRTSIYLAASASAELLADIMLC 139
Query: 392 FVYPLDFARTRLAADVGKGDGQREFTGLGNCISKIFKSDGLTGLYRG 532
P++ + R+ + R SKI ++G LYRG
Sbjct: 140 ---PMEAIKVRV-----QTSNPRFANTTREAWSKIVTNEGFGTLYRG 178
Score = 25.0 bits (52), Expect = 8.7
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 494 IFKSDGLTGLYRGFGVSVQGIIIYRAAYFGFYD 592
I +GL GLY G ++ G + +GFY+
Sbjct: 68 ILSKEGLRGLYTGGMPTLIGYSLQGCGKYGFYE 100
>SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 33.1 bits (72), Expect = 0.033
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 470 GLGNCISKIFKSDGLTGLYRGFGVSVQGIIIYRAAYFGFYD 592
G+ + + ++KS+GL GL+RGFG + + F FY+
Sbjct: 283 GIRHVLGGLYKSEGLLGLFRGFGPRIFWTSSQSSLMFVFYE 323
>SPBC29A3.11c |||mitochondrial carboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 33.1 bits (72), Expect = 0.033
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +2
Query: 464 FTGLGNCISKIFKSDGLTGLYRGFGVSVQGIIIYRAAYFGFYDTAR 601
F + +C K++GL GLYRG + + + R+ F YD+ +
Sbjct: 50 FPTIRSCFQNAVKNEGLKGLYRGLTLPLISATLSRSVSFTVYDSLK 95
Score = 27.9 bits (59), Expect = 1.2
Identities = 43/198 (21%), Positives = 71/198 (35%), Gaps = 9/198 (4%)
Frame = +2
Query: 29 AKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRIPKEQGLL 208
A F A +S+A+S P++ +K+ Q + + I F K +GL
Sbjct: 18 ASTFSAALVSSAISNVIGYPLDSIKVRQQTYN----------FPTIRSCFQNAVKNEGLK 67
Query: 209 SFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFWRYFXXXXXXXXXXXXTSL 388
+RG +I +++++F D K F VD RYF +
Sbjct: 68 GLYRGLTLPLISATLSRSVSFTVYDSLKLTF-AHVDPTL---RYFISGLGTGTFISLFAC 123
Query: 389 CFVYPLDFAR-TRLAADVGKGDGQREFTGLG--------NCISKIFKSDGLTGLYRGFGV 541
F Y +++ L G Q + L S I + G T L+ G+
Sbjct: 124 PFEYSKLYSQIDMLLRKTNMGRRQETNSKLSVRPPLSSFQSASDIVRRYGFTALWNGYRY 183
Query: 542 SVQGIIIYRAAYFGFYDT 595
+ + A YF Y+T
Sbjct: 184 HLTRDALGSACYFTIYET 201
>SPBC19F5.02c |||U3 snoRNP protein Utp4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 710
Score = 30.7 bits (66), Expect = 0.17
Identities = 27/104 (25%), Positives = 38/104 (36%), Gaps = 6/104 (5%)
Frame = +2
Query: 32 KDFLAGGISAAVSKT--AVAPIERVKLLLQVQHVSK-QIAEDQRYKGIVDAFVRIPKEQG 202
KD L GG + V K P + +QV K + A K + D + G
Sbjct: 167 KDHLVGGCADGVIKVWDLSTPNSAIISRMQVDRARKGEAALIWAVKSLRDGTIVSADSSG 226
Query: 203 LLSFWRGNFANVIRYFP---TQALNFAFKDKYKQVFLGGVDKNT 325
+ FW G F + + F AL VF G+D+ T
Sbjct: 227 AVKFWNGKFFTLSQSFKLHLADALCLGVSANGDMVFSSGIDRKT 270
>SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 277
Score = 30.7 bits (66), Expect = 0.17
Identities = 20/73 (27%), Positives = 34/73 (46%)
Frame = +2
Query: 383 SLCFVYPLDFARTRLAADVGKGDGQREFTGLGNCISKIFKSDGLTGLYRGFGVSVQGIII 562
S ++PLD A+ ++ A + + D + F S I + + LY G ++V G
Sbjct: 14 STLIMHPLDLAKIQMQASMNQ-DSKSLFQVFK---SNIGSNGSIRSLYHGLSINVLGSAA 69
Query: 563 YRAAYFGFYDTAR 601
AYF YD ++
Sbjct: 70 SWGAYFCIYDFSK 82
Score = 25.0 bits (52), Expect = 8.7
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +2
Query: 494 IFKSDGLTGLYRGFGVSVQGI 556
+ K++GL G Y GF S+ G+
Sbjct: 143 LIKNEGLRGCYAGFAPSLLGV 163
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 30.3 bits (65), Expect = 0.23
Identities = 29/151 (19%), Positives = 43/151 (28%)
Frame = +3
Query: 150 NATRVSSTPSSAFPRSRVCSHSGVVTSPMXXXXXXXXXXXXXXXXXXXXXXXVVLTRTRS 329
+++ VSST SS+ S S + TSP + + S
Sbjct: 128 SSSSVSSTTSSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 187
Query: 330 SGVTSLVTXXXXXXXXXXXXXXCTRSTSPVHVSPPMLARVMGXXXXXXXXXXXXXXXXXX 509
S +S + T STS H S +
Sbjct: 188 SSSSSSSSSSSSSSSSSSSSVPITSSTSSSHSSSS--SSSSSSSSSSRPSSSSSFITTMS 245
Query: 510 XXXVCTEVSVYPYRASLSTVRHISVSTTRRA 602
+ V+V P +S ST + ST A
Sbjct: 246 SSTFISTVTVTPSSSSSSTSSEVPSSTAALA 276
>SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 271
Score = 27.9 bits (59), Expect = 1.2
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2
Query: 479 NCISKIFKSDGLTGLYRGFGVSV 547
N IS + +S+GL G YRG+ + V
Sbjct: 121 NTISTLARSEGLKGFYRGYWMGV 143
Score = 25.4 bits (53), Expect = 6.5
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +2
Query: 164 IVDAFVRIPKEQGLLSFWRGNFANVIRYFPT 256
+++ + + +GL F+RG + V Y PT
Sbjct: 119 VINTISTLARSEGLKGFYRGYWMGVAIYLPT 149
>SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 335
Score = 27.5 bits (58), Expect = 1.6
Identities = 21/91 (23%), Positives = 40/91 (43%), Gaps = 2/91 (2%)
Frame = +2
Query: 41 LAGGISAAVSKTAVAPIERVKLLLQV--QHVSKQIAEDQRYKGIVDAFVRIPKEQGLLSF 214
+AG + +S T V+PIE + +Q H A + + + D + ++G+L+
Sbjct: 141 IAGASARTISATIVSPIELFRTRVQAVGGHYPPGHAREIANE-VFDGLKLMIHQKGILNL 199
Query: 215 WRGNFANVIRYFPTQALNFAFKDKYKQVFLG 307
W G + R P A + ++ + LG
Sbjct: 200 WSGVSVTLWRDVPFSAFYWWSYERIRLFLLG 230
>SPAC23E2.02 |lsd2|swm2, saf140|histone demethylase SWIRM2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1273
Score = 27.5 bits (58), Expect = 1.6
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 141 PRTNATRVSSTPSSAFPRSRVCSHSGVVTSP 233
P T A V S P+S+FP + SG ++SP
Sbjct: 310 PPTTAPAVVSPPASSFPLMSSAATSGNISSP 340
>SPBC1271.11 |||tricarboxylate transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 258
Score = 26.2 bits (55), Expect = 3.7
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = +2
Query: 485 ISKIFKSDGLTGLYRGFGVSVQGIIIYRAAYFGFYD 592
+ +I+K +G+ G +G G+ V + + Y G Y+
Sbjct: 206 VRRIYKENGIFGFEKGLGLRVFASSLGLSIYLGTYE 241
>SPBC56F2.04 |utp20||U3 snoRNP protein Utp20|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 2493
Score = 25.4 bits (53), Expect = 6.5
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = -3
Query: 553 ALYGYTETSVQTSEAIRLEDLADAVTET 470
ALY YTE +Q +E ++LAD VTE+
Sbjct: 2390 ALYRYTE--LQEAERKSQQELADLVTES 2415
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,113,890
Number of Sequences: 5004
Number of extensions: 36561
Number of successful extensions: 195
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 176
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 268287866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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