Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_N12
         (469 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    25   0.46 
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   3.3  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   4.3  
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    21   7.5  
AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    21   7.5  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   7.5  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    20   9.9  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    20   9.9  

>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 24.6 bits (51), Expect = 0.46
 Identities = 13/55 (23%), Positives = 23/55 (41%)
 Frame = -2

Query: 375 INDCCRFTGITFVAWFXXXXXXXXXXSIAFFTTHTYCSLPSWSTV*ATFSSVTFL 211
           +N CC    I  + +F           + F   H + +L  WS + +TF+ +  L
Sbjct: 58  LNVCCLNLSIVTI-FFNFATKKLEQFIVRFMKYHFFGTLKLWSQLFSTFAGIEVL 111


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 7/20 (35%), Positives = 9/20 (45%)
 Frame = -3

Query: 212 WPMIPGIPCGPWSPFSPGNP 153
           W    G+  G +  F P NP
Sbjct: 732 WKRATGVSPGDYKDFKPNNP 751


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 9/25 (36%), Positives = 11/25 (44%)
 Frame = -3

Query: 257 PPGLPSKPRSPLSPFWPMIPGIPCG 183
           P  +PS P  P      M   +PCG
Sbjct: 205 PEPVPSTPYPPPGSLGSMGVSVPCG 229


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 140 DQWAMDYQEKRVTRDHKE 193
           DQ  MDY  K V + HK+
Sbjct: 61  DQKVMDYFIKMVKQKHKK 78


>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 181 PGHPFLLVIHSPLVPG 134
           PG P ++  H PL+ G
Sbjct: 147 PGAPMMMSSHGPLMYG 162


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -2

Query: 234 TFSSVTFLAYDTWYSLWSLVTLFS 163
           T +++  +AY   + LW +V  FS
Sbjct: 238 TKNTIETVAYSVIFILWHIVGTFS 261


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +1

Query: 271 GMSGEKGDRGFPGRSG 318
           G + E  DRGFPG  G
Sbjct: 449 GKNCEIYDRGFPGGLG 464


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 296 RSPFSPLIPIAPCPPGL 246
           R+  SPLI  +  PPG+
Sbjct: 174 RASVSPLISSSSSPPGV 190


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.308    0.146    0.454 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,755
Number of Sequences: 336
Number of extensions: 2416
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10826639
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (20.5 bits)