Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_N12
(469 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 26 0.18
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 24 0.71
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 24 0.94
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 24 0.94
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 24 0.94
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 24 0.94
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 24 0.94
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 24 0.94
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 24 0.94
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 23 1.2
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 23 1.2
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 23 1.2
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 23 1.2
AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin prot... 22 3.8
AB073997-1|BAC76401.1| 124|Apis mellifera preprotachykinin prot... 22 3.8
AB073996-1|BAC76400.1| 215|Apis mellifera preprotachykinin prot... 22 3.8
AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin prot... 22 3.8
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 21 6.6
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 21 6.6
DQ069332-1|AAZ32217.1| 296|Apis mellifera RNA polymerase II lar... 21 8.7
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 21 8.7
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 21 8.7
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 26.2 bits (55), Expect = 0.18
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = -3
Query: 257 PPGLPSKPRSPLSPFWPMIPGIPCGPWSPFSPGNP*PTGPWSPLSPFSPVIP 102
P G+P + F + G+P P++PF+ NP P P SP +P +P
Sbjct: 1135 PGGIPGPNGIKMPSF---MEGMPHLPFTPFNFWNPPPFMP-SPFMAGAPNVP 1182
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.2 bits (50), Expect = 0.71
Identities = 14/44 (31%), Positives = 17/44 (38%)
Frame = -3
Query: 227 PLSPFWPMIPGIPCGPWSPFSPGNP*PTGPWSPLSPFSPVIPGN 96
P+ + P P GPW P P P +PF IP N
Sbjct: 124 PVPIYCGNFPSRPMGPWVPMQEQIP-RFRHIGPSTPFPQFIPPN 166
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.8 bits (49), Expect = 0.94
Identities = 14/44 (31%), Positives = 17/44 (38%)
Frame = -3
Query: 227 PLSPFWPMIPGIPCGPWSPFSPGNP*PTGPWSPLSPFSPVIPGN 96
P+ + P P GPW P P P +PF IP N
Sbjct: 124 PVPIYCGNFPSRPMGPWVPMQEQIP-RFRHIGPSTPFPRFIPPN 166
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.8 bits (49), Expect = 0.94
Identities = 14/44 (31%), Positives = 17/44 (38%)
Frame = -3
Query: 227 PLSPFWPMIPGIPCGPWSPFSPGNP*PTGPWSPLSPFSPVIPGN 96
P+ + P P GPW P P P +PF IP N
Sbjct: 124 PVPIYCGNFPSRPMGPWVPMQEQIP-RFRHIGPSTPFPRFIPPN 166
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.8 bits (49), Expect = 0.94
Identities = 14/44 (31%), Positives = 17/44 (38%)
Frame = -3
Query: 227 PLSPFWPMIPGIPCGPWSPFSPGNP*PTGPWSPLSPFSPVIPGN 96
P+ + P P GPW P P P +PF IP N
Sbjct: 124 PVPIYCGNFPSRPMGPWVPMQEQIP-RFRHIGPSTPFPRFIPPN 166
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.8 bits (49), Expect = 0.94
Identities = 14/44 (31%), Positives = 17/44 (38%)
Frame = -3
Query: 227 PLSPFWPMIPGIPCGPWSPFSPGNP*PTGPWSPLSPFSPVIPGN 96
P+ + P P GPW P P P +PF IP N
Sbjct: 124 PVPIYCGNFPSRPMGPWVPMQEQIP-RFRHIGPSTPFPRFIPPN 166
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.8 bits (49), Expect = 0.94
Identities = 14/44 (31%), Positives = 17/44 (38%)
Frame = -3
Query: 227 PLSPFWPMIPGIPCGPWSPFSPGNP*PTGPWSPLSPFSPVIPGN 96
P+ + P P GPW P P P +PF IP N
Sbjct: 124 PVPIYCGNFPSRPMGPWVPMQEQIP-RFRHIGPSTPFPRFIPPN 166
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.8 bits (49), Expect = 0.94
Identities = 14/44 (31%), Positives = 17/44 (38%)
Frame = -3
Query: 227 PLSPFWPMIPGIPCGPWSPFSPGNP*PTGPWSPLSPFSPVIPGN 96
P+ + P P GPW P P P +PF IP N
Sbjct: 124 PVPIYCGNFPSRPMGPWVPMQEQIP-RFRHIGPSTPFPRFIPPN 166
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 23.8 bits (49), Expect = 0.94
Identities = 14/44 (31%), Positives = 17/44 (38%)
Frame = -3
Query: 227 PLSPFWPMIPGIPCGPWSPFSPGNP*PTGPWSPLSPFSPVIPGN 96
P+ + P P GPW P P P +PF IP N
Sbjct: 127 PVPIYCGNFPSRPMGPWVPMQEQIP-RFRHIGPSTPFPRFIPPN 169
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 23.4 bits (48), Expect = 1.2
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -3
Query: 461 NPGAPGAPSDPG 426
NPG PG P D G
Sbjct: 331 NPGPPGVPGDHG 342
Score = 21.4 bits (43), Expect = 5.0
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1
Query: 391 PGPRGVPGIDG 423
PGP GVPG G
Sbjct: 332 PGPPGVPGDHG 342
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 23.4 bits (48), Expect = 1.2
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -3
Query: 461 NPGAPGAPSDPG 426
NPG PG P D G
Sbjct: 331 NPGPPGVPGDHG 342
Score = 21.4 bits (43), Expect = 5.0
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1
Query: 391 PGPRGVPGIDG 423
PGP GVPG G
Sbjct: 332 PGPPGVPGDHG 342
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 23.4 bits (48), Expect = 1.2
Identities = 13/43 (30%), Positives = 17/43 (39%)
Frame = +1
Query: 28 KGELGREGIAGQPGNDGAQGPTGFPGITGEKGDKGDQGPVGYG 156
+G+ G G G G +G TGF + D D YG
Sbjct: 80 RGKGRGHGKGGSRGRGGNRGRTGFNNKNKDGDDNNDYEDNDYG 122
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 23.4 bits (48), Expect = 1.2
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -3
Query: 461 NPGAPGAPSDPG 426
NPG PG P D G
Sbjct: 270 NPGPPGVPGDHG 281
Score = 21.4 bits (43), Expect = 5.0
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1
Query: 391 PGPRGVPGIDG 423
PGP GVPG G
Sbjct: 271 PGPPGVPGDHG 281
>AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin
protein.
Length = 339
Score = 21.8 bits (44), Expect = 3.8
Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 5/40 (12%)
Frame = +1
Query: 64 PGNDGAQGPTGFPGITGEKGDKGDQ----GPVGY-GLPGE 168
P + + P GF G+ G+K D+ P+G+ G+ G+
Sbjct: 81 PEDINKRAPMGFQGMRGKKASFDDEYYKRAPMGFQGMRGK 120
>AB073997-1|BAC76401.1| 124|Apis mellifera preprotachykinin
protein.
Length = 124
Score = 21.8 bits (44), Expect = 3.8
Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 5/40 (12%)
Frame = +1
Query: 64 PGNDGAQGPTGFPGITGEKGDKGDQ----GPVGY-GLPGE 168
P + + P GF G+ G+K D+ P+G+ G+ G+
Sbjct: 82 PEDINKRAPMGFQGMRGKKASFDDEYYKRAPMGFQGMRGK 121
>AB073996-1|BAC76400.1| 215|Apis mellifera preprotachykinin
protein.
Length = 215
Score = 21.8 bits (44), Expect = 3.8
Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 5/40 (12%)
Frame = +1
Query: 64 PGNDGAQGPTGFPGITGEKGDKGDQ----GPVGY-GLPGE 168
P + + P GF G+ G+K D+ P+G+ G+ G+
Sbjct: 81 PEDINKRAPMGFQGMRGKKASFDDEYYKRAPMGFQGMRGK 120
>AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin
protein.
Length = 301
Score = 21.8 bits (44), Expect = 3.8
Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 5/40 (12%)
Frame = +1
Query: 64 PGNDGAQGPTGFPGITGEKGDKGDQ----GPVGY-GLPGE 168
P + + P GF G+ G+K D+ P+G+ G+ G+
Sbjct: 81 PEDINKRAPMGFQGMRGKKASFDDEYYKRAPMGFQGMRGK 120
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 21.0 bits (42), Expect = 6.6
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = +1
Query: 250 PGGQGAIGMSGEKGDRGFPGRS 315
P G SGE RG G+S
Sbjct: 380 PSGSSVHSDSGENNSRGHSGQS 401
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 21.0 bits (42), Expect = 6.6
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = -3
Query: 422 PSIPGTPRGPG 390
P P PRGPG
Sbjct: 393 PCTPSPPRGPG 403
>DQ069332-1|AAZ32217.1| 296|Apis mellifera RNA polymerase II large
subunit protein.
Length = 296
Score = 20.6 bits (41), Expect = 8.7
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -1
Query: 181 PGHPFLLVIHSPLVPGHLC 125
PG ++V H LV G LC
Sbjct: 84 PGDTKVMVEHGELVMGILC 102
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 20.6 bits (41), Expect = 8.7
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3
Query: 176 SPFSPGNP*PTGPWSP 129
S +PGN P+GP SP
Sbjct: 56 SLINPGNFSPSGPNSP 71
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 20.6 bits (41), Expect = 8.7
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3
Query: 176 SPFSPGNP*PTGPWSP 129
S +PGN P+GP SP
Sbjct: 56 SLINPGNFSPSGPNSP 71
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.308 0.146 0.454
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,214
Number of Sequences: 438
Number of extensions: 3164
Number of successful extensions: 25
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12559158
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.0 bits)
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