Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_N11
(388 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_54691| Best HMM Match : SWIRM (HMM E-Value=0.0033) 31 0.33
SB_35206| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.012) 31 0.33
SB_41185| Best HMM Match : RVT_1 (HMM E-Value=1.7e-10) 29 1.0
SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31) 29 1.3
SB_36560| Best HMM Match : Tropomyosin (HMM E-Value=9.6e-07) 29 1.3
SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14) 29 1.8
SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19) 29 1.8
SB_32454| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.3
SB_14243| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.3
SB_770| Best HMM Match : DUF837 (HMM E-Value=1.4) 28 2.3
SB_56618| Best HMM Match : DUF1213 (HMM E-Value=0.022) 27 4.0
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 27 4.0
SB_33030| Best HMM Match : Transformer (HMM E-Value=5.1) 27 4.0
SB_23066| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.0
SB_13671| Best HMM Match : RVT_1 (HMM E-Value=1.8e-11) 27 4.0
SB_57931| Best HMM Match : Vicilin_N (HMM E-Value=0.96) 27 5.3
SB_35419| Best HMM Match : SMC_C (HMM E-Value=1.9e-05) 27 5.3
SB_28246| Best HMM Match : M (HMM E-Value=0.0007) 27 5.3
SB_9163| Best HMM Match : XS (HMM E-Value=0.84) 27 5.3
SB_30634| Best HMM Match : Apolipoprotein (HMM E-Value=0.16) 27 5.3
SB_49284| Best HMM Match : zf-C2H2 (HMM E-Value=0) 27 7.1
SB_9369| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_42467| Best HMM Match : Borrelia_orfA (HMM E-Value=1.7) 27 7.1
SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45) 27 7.1
SB_17118| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_58363| Best HMM Match : LETM1 (HMM E-Value=0) 26 9.3
SB_41695| Best HMM Match : Spectrin (HMM E-Value=0) 26 9.3
SB_39233| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.3
SB_36579| Best HMM Match : C1_1 (HMM E-Value=0.00011) 26 9.3
SB_28044| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.3
SB_18945| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.3
SB_3879| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.3
SB_3733| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.3
>SB_54691| Best HMM Match : SWIRM (HMM E-Value=0.0033)
Length = 809
Score = 31.1 bits (67), Expect = 0.33
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = +1
Query: 1 LDAQLKXXXXXXXXXXXSVQKLQKEVDRLEDDLVAEREKSKLLQEEMEATLHDI 162
L AQ+ Q LQKE+ LEDD ER++ K + E + L I
Sbjct: 587 LYAQINPLEAKLKSSEERCQSLQKEIKSLEDDFNVERDQMKEREGEFKQKLQKI 640
>SB_35206| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.012)
Length = 1148
Score = 31.1 bits (67), Expect = 0.33
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = +1
Query: 1 LDAQLKXXXXXXXXXXXSVQKLQKEVDRLEDDLVAEREKSKLLQEEMEATLHDI 162
L AQ+ Q LQKE+ LEDD ER++ K + E + L I
Sbjct: 514 LYAQINPLEAKLKSSEERCQSLQKEIKSLEDDFNVERDQMKEREGEFKQKLQKI 567
>SB_41185| Best HMM Match : RVT_1 (HMM E-Value=1.7e-10)
Length = 1118
Score = 29.5 bits (63), Expect = 1.0
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = -1
Query: 178 VFTCSE-CRGAWP-PFPPAGVCSFRARRP-GRLQACRPPFGVSVRSAQQIQHELQPL 17
VFT + C G W P A P GR + CRPPFGV+ + + Q E++ L
Sbjct: 445 VFTALDACSGFWQLPVDEASSKLLTFNTPWGRYRFCRPPFGVA-PAPEIYQREMERL 500
>SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31)
Length = 2122
Score = 29.1 bits (62), Expect = 1.3
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +1
Query: 1 LDAQLKXXXXXXXXXXXSVQKLQKEVDRLEDDLVAEREKSKLLQEEMEATLHD 159
L+ LK + +L+ + DRL DDL+ +++ L+ E++ T HD
Sbjct: 455 LEKSLKDKNDEIFGIEGKIAELEAKNDRLHDDLMDGKKRFGELEAELKYTEHD 507
>SB_36560| Best HMM Match : Tropomyosin (HMM E-Value=9.6e-07)
Length = 245
Score = 29.1 bits (62), Expect = 1.3
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +1
Query: 64 LQKEVDRLEDDLVAEREKSKLLQEEMEATLHDI 162
L+K+ DRL ++LV ++++ L E+E L D+
Sbjct: 207 LEKQKDRLYNELVRQKKRVAFLSRELEDALADL 239
>SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14)
Length = 1709
Score = 28.7 bits (61), Expect = 1.8
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +1
Query: 55 VQKLQKEVDRLEDDLVAEREKSKLLQEEMEATLHDIQN 168
+ KLQK + R + ++ +E+EK + EE+ A L ++N
Sbjct: 105 INKLQKNLLRTQMEMESEQEKHESELEELRAQLDKLEN 142
>SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19)
Length = 3107
Score = 28.7 bits (61), Expect = 1.8
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +1
Query: 4 DAQLKXXXXXXXXXXXSVQKLQKEVDRLEDDLVAEREKSKLLQEEMEATLHDIQ 165
D +L S +QKE + L+DDL+ + K LQ E++ ++Q
Sbjct: 482 DEELSSVRDQVVEWESSYLAVQKEKEELQDDLLTAQAKFNELQAELDKAHRELQ 535
Score = 27.1 bits (57), Expect = 5.3
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 64 LQKEVDRLEDDLVAEREKSKLLQEEMEATLHDI 162
L+++VD L +DL +E LLQ E+ D+
Sbjct: 562 LKQQVDNLREDLKKSKEAQNLLQREVLENRKDL 594
>SB_32454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1161
Score = 28.3 bits (60), Expect = 2.3
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +1
Query: 58 QKLQKEVDRLEDDLVAEREKSKLLQEEMEATLHD 159
+KLQ E+D+L + L EKS +Q +ME L D
Sbjct: 732 KKLQSEIDKLSESL----EKSVAVQRKMEEELRD 761
>SB_14243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1507
Score = 28.3 bits (60), Expect = 2.3
Identities = 12/53 (22%), Positives = 25/53 (47%)
Frame = +1
Query: 76 VDRLEDDLVAEREKSKLLQEEMEATLHDIQNMXXXXXXXXXXXXXLVRSSHSL 234
VD + L R++++ L+EE++ T D+Q L++ + +L
Sbjct: 1256 VDEVSSQLSMSRQRNEKLEEELKDTKEDVQRRRSDMSALKRANDVLIKQNQTL 1308
>SB_770| Best HMM Match : DUF837 (HMM E-Value=1.4)
Length = 269
Score = 28.3 bits (60), Expect = 2.3
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +1
Query: 61 KLQKEVDRLEDDLVAEREKSKLLQEEMEATLHDIQNM 171
KL++ D L +++V +E + ++EE E DI+ +
Sbjct: 40 KLEERCDELFEEIVRMKESQREVEEEQEKLFKDIETL 76
>SB_56618| Best HMM Match : DUF1213 (HMM E-Value=0.022)
Length = 1421
Score = 27.5 bits (58), Expect = 4.0
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +1
Query: 58 QKLQKEVDRLEDDLVAEREKSKLLQEEME 144
++ Q+E DRLE++ E E+ + L+EE E
Sbjct: 1222 RRFQEEQDRLEEERRLEEERLRQLEEEDE 1250
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 27.5 bits (58), Expect = 4.0
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +1
Query: 55 VQKLQKEVDRLEDDLVAEREKSKLLQEEME 144
V + Q+EVDRLE+D+ EK L E+E
Sbjct: 872 VSEKQREVDRLENDMDVAAEKIISLNLEVE 901
>SB_33030| Best HMM Match : Transformer (HMM E-Value=5.1)
Length = 240
Score = 27.5 bits (58), Expect = 4.0
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +2
Query: 47 SAPYRNSKRRSTGLKTTWSPSAKRAN-SCRRKWRPR 151
S PYR S R TGL T A+ + S R+K R R
Sbjct: 54 STPYRCSLSRKTGLAATRGKHAQESTFSARKKLRER 89
>SB_23066| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 27.5 bits (58), Expect = 4.0
Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Frame = -1
Query: 256 SDRNRTRRASETNERAGQG*GSEGEGVFTCSECRGAWPPFPP--AGVCS 116
++R R R T R G G + TCS+ G W P PP G CS
Sbjct: 121 TERLRVRHGETTLFRCDLGYSLIGSDMITCSD--GKWIPDPPQCKGGCS 167
>SB_13671| Best HMM Match : RVT_1 (HMM E-Value=1.8e-11)
Length = 1702
Score = 27.5 bits (58), Expect = 4.0
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = -1
Query: 124 VCSFRARRPGRLQACRPPFGVSVRS--AQQIQHE 29
+C+F A GR++ CR PFG+S S AQ++ E
Sbjct: 1198 LCTFNAPF-GRIRFCRMPFGISCASEVAQKMVEE 1230
>SB_57931| Best HMM Match : Vicilin_N (HMM E-Value=0.96)
Length = 203
Score = 27.1 bits (57), Expect = 5.3
Identities = 14/57 (24%), Positives = 27/57 (47%)
Frame = +1
Query: 1 LDAQLKXXXXXXXXXXXSVQKLQKEVDRLEDDLVAEREKSKLLQEEMEATLHDIQNM 171
LDAQLK + +L+K +D+ + + ++ LQE++ + IQ +
Sbjct: 89 LDAQLKRVRDESESKEGMIDELRKSLDKALSEGREQANETAQLQEDLRMAVSAIQQL 145
>SB_35419| Best HMM Match : SMC_C (HMM E-Value=1.9e-05)
Length = 867
Score = 27.1 bits (57), Expect = 5.3
Identities = 11/28 (39%), Positives = 21/28 (75%)
Frame = +1
Query: 58 QKLQKEVDRLEDDLVAEREKSKLLQEEM 141
Q +++E+ RLE DL +R++ + LQ+E+
Sbjct: 444 QDIEQEIRRLERDLNNKRQQHQQLQDEL 471
>SB_28246| Best HMM Match : M (HMM E-Value=0.0007)
Length = 1121
Score = 27.1 bits (57), Expect = 5.3
Identities = 14/57 (24%), Positives = 27/57 (47%)
Frame = +1
Query: 1 LDAQLKXXXXXXXXXXXSVQKLQKEVDRLEDDLVAEREKSKLLQEEMEATLHDIQNM 171
LDAQLK + +L+K +D+ + + ++ LQE++ + IQ +
Sbjct: 89 LDAQLKRVRDESESKEGMIDELRKSLDKALSEGREQANETAQLQEDLRMAVSAIQQL 145
>SB_9163| Best HMM Match : XS (HMM E-Value=0.84)
Length = 424
Score = 27.1 bits (57), Expect = 5.3
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 59 RNSKRRSTGLKTTWSPSAKRANSCRRKWRPR 151
R++ R G K TW+ KR+ RRK R R
Sbjct: 387 RSNPFRVKGKKVTWNKYTKRSKVARRKNRQR 417
>SB_30634| Best HMM Match : Apolipoprotein (HMM E-Value=0.16)
Length = 558
Score = 27.1 bits (57), Expect = 5.3
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +1
Query: 64 LQKEVDRLEDDLVAEREKSKLLQEEME 144
LQ E+D L ++L A+ K + LQ+E+E
Sbjct: 141 LQAELDNLNNELKAKDNKIESLQDELE 167
>SB_49284| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1041
Score = 26.6 bits (56), Expect = 7.1
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = -1
Query: 145 PPFP-PAGVCSFRARRPGRLQACRPPFGVSVRSAQQ 41
PP P P G R P + + RPP GV R AQ+
Sbjct: 424 PPQPSPTGAPPQRPHPPPQQPSPRPPMGVPHRGAQR 459
>SB_9369| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 408
Score = 26.6 bits (56), Expect = 7.1
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +1
Query: 61 KLQKEVDRLEDDLVAEREKSKLLQEEME 144
++ KE++ L++ A E+SK LQE++E
Sbjct: 188 RMSKEIELLDNKSSALEEESKSLQEQLE 215
>SB_42467| Best HMM Match : Borrelia_orfA (HMM E-Value=1.7)
Length = 810
Score = 26.6 bits (56), Expect = 7.1
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = -1
Query: 301 QNHYYHIYEPYERYHSDRNRTRRASETNER 212
+ H+ HI +P +++H+D N+ S TN++
Sbjct: 573 KKHHTHI-DPEKKHHTDSNKHHSDSPTNKK 601
>SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45)
Length = 4160
Score = 26.6 bits (56), Expect = 7.1
Identities = 12/39 (30%), Positives = 28/39 (71%), Gaps = 1/39 (2%)
Frame = +1
Query: 55 VQKLQKEVDRLEDDL-VAEREKSKLLQEEMEATLHDIQN 168
+ +L+KEV RL+DD +A +++ +++++ E + D+Q+
Sbjct: 3554 ISRLEKEVKRLKDDQELARKQRQEVIEKGRE--IEDLQS 3590
>SB_17118| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 282
Score = 26.6 bits (56), Expect = 7.1
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 4/35 (11%)
Frame = +3
Query: 144 GHAPRHSEHVN----TPSPSLPYPCPARSFVSLAR 236
GH + HV+ +PSP L P PARS + L R
Sbjct: 143 GHPSPKTNHVSGITISPSPLLGRPRPARSLMDLQR 177
>SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2193
Score = 26.6 bits (56), Expect = 7.1
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +1
Query: 58 QKLQKEVDRLEDDLVAEREKSKLLQEEME 144
+ L+ E+D+ ED+ A R+K K L+ E+E
Sbjct: 686 EALKDELDKTEDENDALRDKKKELEAEIE 714
>SB_58363| Best HMM Match : LETM1 (HMM E-Value=0)
Length = 540
Score = 26.2 bits (55), Expect = 9.3
Identities = 14/30 (46%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Frame = +1
Query: 61 KLQKEVDRLEDDLVA-EREKSKLLQEEMEA 147
KL+ E+ RLE+ +A E+E+SK ++E EA
Sbjct: 395 KLRLEILRLEEQKIAEEKEESKKRKQEEEA 424
>SB_41695| Best HMM Match : Spectrin (HMM E-Value=0)
Length = 2322
Score = 26.2 bits (55), Expect = 9.3
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +1
Query: 55 VQKLQKEVDRLEDDLVAEREKSKLLQEEME 144
VQK E+ + EDD++ E + LQ++M+
Sbjct: 1093 VQKQMVELQKFEDDMLKEEDSFDDLQKKMD 1122
>SB_39233| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 33
Score = 26.2 bits (55), Expect = 9.3
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 135 GNGGHAPRHSEHVNTPS 185
G G +PRH +HVNT S
Sbjct: 1 GVSGKSPRHRKHVNTDS 17
>SB_36579| Best HMM Match : C1_1 (HMM E-Value=0.00011)
Length = 633
Score = 26.2 bits (55), Expect = 9.3
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +1
Query: 55 VQKLQKEVDRLEDDLVAEREKSKLLQEEMEATLHDIQNM 171
++K +KE +L +L AEREK + +A L + Q M
Sbjct: 337 LRKKEKECKKLHQELAAEREKYGQQVTKHQAQLGEAQMM 375
>SB_28044| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 879
Score = 26.2 bits (55), Expect = 9.3
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -2
Query: 378 LHLKKAAGNYSKTNNVITRSP 316
L+ K AGN+ TNN T +P
Sbjct: 579 LYYKNKAGNFDATNNTATTNP 599
>SB_18945| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 779
Score = 26.2 bits (55), Expect = 9.3
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = -1
Query: 190 EGEGVFTCSECRGAWPPFPPAGVCSFRARRP-GRLQACRPPFGVSVRSAQQIQHELQPL 17
E +G+ E W P A P GR + CR PFGV+ + + Q E++ L
Sbjct: 264 EQDGIIVKEEEHTPWLPVDEASSKFLTFNTPWGRYRFCRLPFGVA-PAPEIYQREMERL 321
>SB_3879| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 693
Score = 26.2 bits (55), Expect = 9.3
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 156 RHSEHVNTPSPSLPYPCPARSFVSLARL 239
+ SEHVNTP + +P + S+ RL
Sbjct: 71 KKSEHVNTPKNRIEFPHTLKFSFSIVRL 98
>SB_3733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1755
Score = 26.2 bits (55), Expect = 9.3
Identities = 10/31 (32%), Positives = 21/31 (67%)
Frame = +1
Query: 58 QKLQKEVDRLEDDLVAEREKSKLLQEEMEAT 150
Q+ ++++ R+ED L A ++K +Q+E + T
Sbjct: 978 QQSKQDISRVEDKLEASQKKISQIQQEKQQT 1008
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,671,430
Number of Sequences: 59808
Number of extensions: 184081
Number of successful extensions: 920
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 919
length of database: 16,821,457
effective HSP length: 74
effective length of database: 12,395,665
effective search space used: 669365910
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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