Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_N11
(388 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D38542-1|BAA07545.1| 256|Caenorhabditis elegans CeTMIII protein. 54 4e-08
D38539-3|BAA07542.1| 256|Caenorhabditis elegans CeTMIII protein. 54 4e-08
AL132877-5|CAD45604.1| 256|Caenorhabditis elegans Hypothetical ... 54 4e-08
D38540-1|BAA07543.1| 284|Caenorhabditis elegans CeTMI protein. 53 6e-08
AL132877-1|CAC70114.1| 284|Caenorhabditis elegans Hypothetical ... 53 6e-08
D38539-1|BAA07540.1| 284|Caenorhabditis elegans CeTMI protein. 52 1e-07
D38541-1|BAA07544.1| 284|Caenorhabditis elegans CeTMII protein. 41 3e-04
D38539-2|BAA07541.1| 284|Caenorhabditis elegans CeTMII protein. 41 3e-04
AL132877-4|CAC70112.1| 284|Caenorhabditis elegans Hypothetical ... 41 3e-04
AL132877-3|CAC70115.1| 256|Caenorhabditis elegans Hypothetical ... 41 3e-04
AL132877-2|CAC70113.2| 193|Caenorhabditis elegans Hypothetical ... 41 3e-04
AF298180-1|AAG10302.1| 256|Caenorhabditis elegans tropomyosin i... 41 3e-04
Z82266-11|CAB05177.4| 1192|Caenorhabditis elegans Hypothetical p... 29 0.86
DQ360810-1|ABC88647.1| 1192|Caenorhabditis elegans intraflagella... 29 0.86
Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical pr... 29 1.1
Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical pr... 29 1.1
X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy ch... 29 1.1
Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical pr... 29 1.5
AC006631-1|AAF39793.2| 787|Caenorhabditis elegans Hypothetical ... 28 2.6
AC006607-9|AAF60368.2| 995|Caenorhabditis elegans Hypothetical ... 28 2.6
AL132876-14|CAD21666.1| 486|Caenorhabditis elegans Hypothetical... 27 3.5
AF024502-2|AAK77623.1| 591|Caenorhabditis elegans Hypothetical ... 27 3.5
AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical... 27 3.5
Z92833-2|CAB07379.1| 891|Caenorhabditis elegans Hypothetical pr... 27 4.6
Z92780-3|CAB07178.2| 289|Caenorhabditis elegans Hypothetical pr... 27 4.6
U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone methyl... 27 4.6
U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone methyl... 27 4.6
AL132948-15|CAD31816.1| 1352|Caenorhabditis elegans Hypothetical... 27 4.6
Z81575-5|CAB04631.2| 353|Caenorhabditis elegans Hypothetical pr... 26 8.1
Z78412-2|CAB01650.1| 169|Caenorhabditis elegans Hypothetical pr... 26 8.1
U12965-3|AAZ32811.1| 980|Caenorhabditis elegans Hypothetical pr... 26 8.1
>D38542-1|BAA07545.1| 256|Caenorhabditis elegans CeTMIII protein.
Length = 256
Score = 54.0 bits (124), Expect = 4e-08
Identities = 26/55 (47%), Positives = 37/55 (67%)
Frame = +1
Query: 1 LDAQLKXXXXXXXXXXXSVQKLQKEVDRLEDDLVAEREKSKLLQEEMEATLHDIQ 165
+ ++LK SVQKLQKEVDRLED+L+ E+E+ + L EE+E T+ +IQ
Sbjct: 200 VSSRLKEAETRAEFAERSVQKLQKEVDRLEDELLLEKERVRNLTEEIEQTVQEIQ 254
>D38539-3|BAA07542.1| 256|Caenorhabditis elegans CeTMIII protein.
Length = 256
Score = 54.0 bits (124), Expect = 4e-08
Identities = 26/55 (47%), Positives = 37/55 (67%)
Frame = +1
Query: 1 LDAQLKXXXXXXXXXXXSVQKLQKEVDRLEDDLVAEREKSKLLQEEMEATLHDIQ 165
+ ++LK SVQKLQKEVDRLED+L+ E+E+ + L EE+E T+ +IQ
Sbjct: 200 VSSRLKEAETRAEFAERSVQKLQKEVDRLEDELLLEKERVRNLTEEIEQTVQEIQ 254
>AL132877-5|CAD45604.1| 256|Caenorhabditis elegans Hypothetical
protein Y105E8B.1e protein.
Length = 256
Score = 54.0 bits (124), Expect = 4e-08
Identities = 26/55 (47%), Positives = 37/55 (67%)
Frame = +1
Query: 1 LDAQLKXXXXXXXXXXXSVQKLQKEVDRLEDDLVAEREKSKLLQEEMEATLHDIQ 165
+ ++LK SVQKLQKEVDRLED+L+ E+E+ + L EE+E T+ +IQ
Sbjct: 200 VSSRLKEAETRAEFAERSVQKLQKEVDRLEDELLLEKERVRNLTEEIEQTVQEIQ 254
>D38540-1|BAA07543.1| 284|Caenorhabditis elegans CeTMI protein.
Length = 284
Score = 53.2 bits (122), Expect = 6e-08
Identities = 24/54 (44%), Positives = 36/54 (66%)
Frame = +1
Query: 1 LDAQLKXXXXXXXXXXXSVQKLQKEVDRLEDDLVAEREKSKLLQEEMEATLHDI 162
+ ++LK SVQKLQKEVDRLED+LV E+E+ K + EE+++T ++
Sbjct: 228 VSSRLKEAETRAEFAERSVQKLQKEVDRLEDELVHEKERYKTISEELDSTFQEL 281
>AL132877-1|CAC70114.1| 284|Caenorhabditis elegans Hypothetical
protein Y105E8B.1a protein.
Length = 284
Score = 53.2 bits (122), Expect = 6e-08
Identities = 24/54 (44%), Positives = 36/54 (66%)
Frame = +1
Query: 1 LDAQLKXXXXXXXXXXXSVQKLQKEVDRLEDDLVAEREKSKLLQEEMEATLHDI 162
+ ++LK SVQKLQKEVDRLED+LV E+E+ K + EE+++T ++
Sbjct: 228 VSSRLKEAETRAEFAERSVQKLQKEVDRLEDELVHEKERYKTISEELDSTFQEL 281
>D38539-1|BAA07540.1| 284|Caenorhabditis elegans CeTMI protein.
Length = 284
Score = 52.0 bits (119), Expect = 1e-07
Identities = 24/54 (44%), Positives = 36/54 (66%)
Frame = +1
Query: 1 LDAQLKXXXXXXXXXXXSVQKLQKEVDRLEDDLVAEREKSKLLQEEMEATLHDI 162
+ ++LK SVQKLQKEVDRLED+LV E+E+ K + EE+++ L ++
Sbjct: 228 VSSRLKEAETRAEFAERSVQKLQKEVDRLEDELVHEKERYKTISEELDSNLPEL 281
>D38541-1|BAA07544.1| 284|Caenorhabditis elegans CeTMII protein.
Length = 284
Score = 41.1 bits (92), Expect = 3e-04
Identities = 21/57 (36%), Positives = 35/57 (61%)
Frame = +1
Query: 1 LDAQLKXXXXXXXXXXXSVQKLQKEVDRLEDDLVAEREKSKLLQEEMEATLHDIQNM 171
+ ++LK SVQKLQKEVDRLE+ AE K++ LQ+E++ + ++ ++
Sbjct: 228 VSSRLKEAETRAEFAERSVQKLQKEVDRLEELRDAEVLKARQLQDELDHMVQELNSV 284
>D38539-2|BAA07541.1| 284|Caenorhabditis elegans CeTMII protein.
Length = 284
Score = 41.1 bits (92), Expect = 3e-04
Identities = 21/57 (36%), Positives = 35/57 (61%)
Frame = +1
Query: 1 LDAQLKXXXXXXXXXXXSVQKLQKEVDRLEDDLVAEREKSKLLQEEMEATLHDIQNM 171
+ ++LK SVQKLQKEVDRLE+ AE K++ LQ+E++ + ++ ++
Sbjct: 228 VSSRLKEAETRAEFAERSVQKLQKEVDRLEELRDAEVLKARQLQDELDHMVQELNSV 284
>AL132877-4|CAC70112.1| 284|Caenorhabditis elegans Hypothetical
protein Y105E8B.1d protein.
Length = 284
Score = 41.1 bits (92), Expect = 3e-04
Identities = 21/57 (36%), Positives = 35/57 (61%)
Frame = +1
Query: 1 LDAQLKXXXXXXXXXXXSVQKLQKEVDRLEDDLVAEREKSKLLQEEMEATLHDIQNM 171
+ ++LK SVQKLQKEVDRLE+ AE K++ LQ+E++ + ++ ++
Sbjct: 228 VSSRLKEAETRAEFAERSVQKLQKEVDRLEELRDAEVLKARQLQDELDHMVQELNSV 284
>AL132877-3|CAC70115.1| 256|Caenorhabditis elegans Hypothetical
protein Y105E8B.1c protein.
Length = 256
Score = 41.1 bits (92), Expect = 3e-04
Identities = 21/57 (36%), Positives = 35/57 (61%)
Frame = +1
Query: 1 LDAQLKXXXXXXXXXXXSVQKLQKEVDRLEDDLVAEREKSKLLQEEMEATLHDIQNM 171
+ ++LK SVQKLQKEVDRLE+ AE K++ LQ+E++ + ++ ++
Sbjct: 200 VSSRLKEAETRAEFAERSVQKLQKEVDRLEELRDAEVLKARQLQDELDHMVQELNSV 256
>AL132877-2|CAC70113.2| 193|Caenorhabditis elegans Hypothetical
protein Y105E8B.1b protein.
Length = 193
Score = 41.1 bits (92), Expect = 3e-04
Identities = 21/57 (36%), Positives = 35/57 (61%)
Frame = +1
Query: 1 LDAQLKXXXXXXXXXXXSVQKLQKEVDRLEDDLVAEREKSKLLQEEMEATLHDIQNM 171
+ ++LK SVQKLQKEVDRLE+ AE K++ LQ+E++ + ++ ++
Sbjct: 137 VSSRLKEAETRAEFAERSVQKLQKEVDRLEELRDAEVLKARQLQDELDHMVQELNSV 193
>AF298180-1|AAG10302.1| 256|Caenorhabditis elegans tropomyosin
isoform IV protein.
Length = 256
Score = 41.1 bits (92), Expect = 3e-04
Identities = 21/57 (36%), Positives = 35/57 (61%)
Frame = +1
Query: 1 LDAQLKXXXXXXXXXXXSVQKLQKEVDRLEDDLVAEREKSKLLQEEMEATLHDIQNM 171
+ ++LK SVQKLQKEVDRLE+ AE K++ LQ+E++ + ++ ++
Sbjct: 200 VSSRLKEAETRAEFAERSVQKLQKEVDRLEELRDAEVLKARQLQDELDHMVQELNSV 256
>Z82266-11|CAB05177.4| 1192|Caenorhabditis elegans Hypothetical
protein F23B2.4 protein.
Length = 1192
Score = 29.5 bits (63), Expect = 0.86
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -1
Query: 325 SFAPLDDRQNHYYHIYEPYERYHSDRNRTRRASETNERAGQ 203
+FA D + +Y PY R+ ++R+R A + RAG+
Sbjct: 812 AFAIADRHPKYVEDVYLPYARFLAERDRFEEAQKAFHRAGK 852
>DQ360810-1|ABC88647.1| 1192|Caenorhabditis elegans intraflagellar
transport protein protein.
Length = 1192
Score = 29.5 bits (63), Expect = 0.86
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -1
Query: 325 SFAPLDDRQNHYYHIYEPYERYHSDRNRTRRASETNERAGQ 203
+FA D + +Y PY R+ ++R+R A + RAG+
Sbjct: 812 AFAIADRHPKYVEDVYLPYARFLAERDRFEEAQKAFHRAGK 852
>Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical
protein T18D3.4 protein.
Length = 1947
Score = 29.1 bits (62), Expect = 1.1
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +1
Query: 58 QKLQKEVDRLEDDLVAEREKSKLLQEEME 144
+KLQ+ V L+D +V E EK + LQE E
Sbjct: 866 EKLQETVATLKDTVVQEEEKKRQLQEGAE 894
>Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical
protein T18D3.4 protein.
Length = 1947
Score = 29.1 bits (62), Expect = 1.1
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +1
Query: 58 QKLQKEVDRLEDDLVAEREKSKLLQEEME 144
+KLQ+ V L+D +V E EK + LQE E
Sbjct: 866 EKLQETVATLKDTVVQEEEKKRQLQEGAE 894
>X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy chain
2 protein.
Length = 1947
Score = 29.1 bits (62), Expect = 1.1
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +1
Query: 58 QKLQKEVDRLEDDLVAEREKSKLLQEEME 144
+KLQ+ V L+D +V E EK + LQE E
Sbjct: 866 EKLQETVATLKDTVVQEEEKKRQLQEGAE 894
>Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical
protein C09G5.6 protein.
Length = 948
Score = 28.7 bits (61), Expect = 1.5
Identities = 22/85 (25%), Positives = 31/85 (36%), Gaps = 3/85 (3%)
Frame = -1
Query: 310 DDRQNHYYHIYEPYERYHSDRNRTRRASETNERAGQ---G*GSEGEGVFTCSECRGAWPP 140
+DR+ Y PY+ + + T + T A + G + S R PP
Sbjct: 73 NDREKRSYEPEGPYQSETTTPSTTTSTAATTTEAAEDESGYDFVNDNGPPSSRPRKPEPP 132
Query: 139 FPPAGVCSFRARRPGRLQACRPPFG 65
P + FRA P RPP G
Sbjct: 133 TMPRTIQGFRAPPPAATSTYRPPHG 157
>AC006631-1|AAF39793.2| 787|Caenorhabditis elegans Hypothetical
protein F27B3.5 protein.
Length = 787
Score = 27.9 bits (59), Expect = 2.6
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +1
Query: 61 KLQKEVDRLEDDLVAEREKSKLLQEE 138
KL+ EV++L+D L ERE + LQEE
Sbjct: 565 KLRNEVNQLKDQLEREREIAYGLQEE 590
>AC006607-9|AAF60368.2| 995|Caenorhabditis elegans Hypothetical
protein C09E7.7 protein.
Length = 995
Score = 27.9 bits (59), Expect = 2.6
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +1
Query: 61 KLQKEVDRLEDDLVAEREKSKLLQEE 138
KL+ EV++L+D L ERE + LQEE
Sbjct: 772 KLRNEVNQLKDQLEREREIAYGLQEE 797
>AL132876-14|CAD21666.1| 486|Caenorhabditis elegans Hypothetical
protein Y105E8A.17 protein.
Length = 486
Score = 27.5 bits (58), Expect = 3.5
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 88 EDDLVAEREKSKLLQEEMEATLHDIQNM 171
E+DL AE + +L ++E E HD+Q +
Sbjct: 224 EEDLTAELRRIELRKKEREKKAHDLQKL 251
>AF024502-2|AAK77623.1| 591|Caenorhabditis elegans Hypothetical
protein M151.4 protein.
Length = 591
Score = 27.5 bits (58), Expect = 3.5
Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 4/43 (9%)
Frame = +1
Query: 52 SVQKLQKEVDRLEDDLVAE-REKSKLL---QEEMEATLHDIQN 168
+VQKLQ + D+LE++ + + R+ K L QE +E D++N
Sbjct: 201 AVQKLQTDKDKLEEEYMNDMRDLKKALKDNQEGLEKIAKDVKN 243
>AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical
protein F38A1.7 protein.
Length = 475
Score = 27.5 bits (58), Expect = 3.5
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = -1
Query: 196 GSEGEGVFTCSECRGAWPPFPPAGVCSFRARRPGRLQACRP 74
G+ + VF CS A P FPP + + R +C+P
Sbjct: 92 GNGAKNVFVCSYDPAAPPTFPPPFILTTRQSTITSANSCQP 132
>Z92833-2|CAB07379.1| 891|Caenorhabditis elegans Hypothetical
protein F38A6.2 protein.
Length = 891
Score = 27.1 bits (57), Expect = 4.6
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 61 KLQKEVDRLEDDLVAEREKSKLLQEEMEATLHDIQNM 171
+L+ VD LE +VA+R + LLQ L +QN+
Sbjct: 37 RLKFRVDELEKIVVAQRNEILLLQSSTVEILRRLQNL 73
>Z92780-3|CAB07178.2| 289|Caenorhabditis elegans Hypothetical
protein C45G3.3 protein.
Length = 289
Score = 27.1 bits (57), Expect = 4.6
Identities = 11/33 (33%), Positives = 23/33 (69%)
Frame = +1
Query: 244 YCDRNDIVRTVRRYDSSGSVYHLVGRTSDNVIS 342
Y ++N+I + VRR+ G+VYH +G + ++++
Sbjct: 68 YANKNNI-QIVRRHSGGGTVYHDLGNLNISLLT 99
>U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform b protein.
Length = 1590
Score = 27.1 bits (57), Expect = 4.6
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 55 VQKLQKEVDRLEDDLVAEREKSKLLQEEME 144
+QK E + ED+ E EK K+ +EEM+
Sbjct: 571 IQKENDEKKQKEDEAKMEEEKKKIKEEEMK 600
>U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform a protein.
Length = 1604
Score = 27.1 bits (57), Expect = 4.6
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 55 VQKLQKEVDRLEDDLVAEREKSKLLQEEME 144
+QK E + ED+ E EK K+ +EEM+
Sbjct: 585 IQKENDEKKQKEDEAKMEEEKKKIKEEEMK 614
>AL132948-15|CAD31816.1| 1352|Caenorhabditis elegans Hypothetical
protein Y39B6A.18 protein.
Length = 1352
Score = 27.1 bits (57), Expect = 4.6
Identities = 10/29 (34%), Positives = 20/29 (68%)
Frame = +1
Query: 58 QKLQKEVDRLEDDLVAEREKSKLLQEEME 144
++ +KE + + L+AERE+ + ++EE E
Sbjct: 861 KRKEKEAEEENEKLIAERERMRAIKEEEE 889
>Z81575-5|CAB04631.2| 353|Caenorhabditis elegans Hypothetical
protein R08H2.5 protein.
Length = 353
Score = 26.2 bits (55), Expect = 8.1
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 198 YPCPARSFVSLARLVLLRSE*YRSY 272
YPCPA+ F + + LV+L R Y
Sbjct: 186 YPCPAQEFFTTSVLVVLIDHDMRKY 210
>Z78412-2|CAB01650.1| 169|Caenorhabditis elegans Hypothetical
protein M176.3 protein.
Length = 169
Score = 26.2 bits (55), Expect = 8.1
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 73 EVDRLEDDLVAEREKSKLLQEEMEATLHDIQ 165
E DRL +L ERE+ L+E+M A L +Q
Sbjct: 51 ESDRLRQELAREREEKARLREDM-AKLSQLQ 80
>U12965-3|AAZ32811.1| 980|Caenorhabditis elegans Hypothetical
protein F23F12.8 protein.
Length = 980
Score = 26.2 bits (55), Expect = 8.1
Identities = 9/27 (33%), Positives = 19/27 (70%)
Frame = +1
Query: 64 LQKEVDRLEDDLVAEREKSKLLQEEME 144
++KE+ + ++ E+ K K+L++EME
Sbjct: 520 IEKEMKENKQKMIEEKNKRKMLEKEME 546
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,057,027
Number of Sequences: 27780
Number of extensions: 134490
Number of successful extensions: 633
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 613
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 633
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 576961812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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