Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_N11
         (388 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    22   2.1  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      21   6.5  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             20   8.6  

>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 22.2 bits (45), Expect = 2.1
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 123 TPAGGNGGHAPRHSEHVNTP 182
           +P  G+ GH P  + H +TP
Sbjct: 116 SPGMGHMGHTPTPNGHPSTP 135


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = +3

Query: 117 EQTPAGGNGGHAPRHSEHVNTPS 185
           ++ PA  +       SEH +TP+
Sbjct: 271 DRPPASASSNEHEAESEHTSTPN 293


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +1

Query: 130 QEEMEATLHDIQN 168
           +EE++A L DIQ+
Sbjct: 593 EEELQAALRDIQS 605


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,908
Number of Sequences: 438
Number of extensions: 1610
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9391092
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)