Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_N10
(469 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70753-10|CAD44125.1| 296|Caenorhabditis elegans Hypothetical p... 30 0.72
Z70753-1|CAD44126.1| 296|Caenorhabditis elegans Hypothetical pr... 30 0.72
L23648-5|AAN63385.1| 381|Caenorhabditis elegans Cyclin t protei... 30 0.95
L23648-4|AAA28033.2| 555|Caenorhabditis elegans Cyclin t protei... 30 0.95
AL132860-24|CAB60506.1| 767|Caenorhabditis elegans Hypothetical... 28 3.8
U61951-3|AAB03158.4| 1783|Caenorhabditis elegans Egg laying defe... 27 6.7
U61951-2|AAM75372.1| 1877|Caenorhabditis elegans Egg laying defe... 27 6.7
AF023602-1|AAC47755.1| 1783|Caenorhabditis elegans putative L-ty... 27 6.7
Z79755-7|CAB02103.1| 466|Caenorhabditis elegans Hypothetical pr... 27 8.9
AL032632-5|CAA21585.1| 297|Caenorhabditis elegans Hypothetical ... 27 8.9
>Z70753-10|CAD44125.1| 296|Caenorhabditis elegans Hypothetical
protein F40F9.1a protein.
Length = 296
Score = 30.3 bits (65), Expect = 0.72
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = -2
Query: 468 LTGLMNYARVYVSLCVYGCVFIVYLCGFFFKIRRRHSLVSLDKSLIIIIQL 316
LT M Y + +S+C +V +C FFKI+ + +L +LI+++ L
Sbjct: 201 LTAHMGYILI-ISMCFMFFGLVVVICSMFFKIKFLMMVYALGGALIMMLYL 250
>Z70753-1|CAD44126.1| 296|Caenorhabditis elegans Hypothetical
protein F40F9.1b protein.
Length = 296
Score = 30.3 bits (65), Expect = 0.72
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = -2
Query: 468 LTGLMNYARVYVSLCVYGCVFIVYLCGFFFKIRRRHSLVSLDKSLIIIIQL 316
LT M Y + +S+C +V +C FFKI+ + +L +LI+++ L
Sbjct: 201 LTAHMGYILI-ISMCFMFFGLVVVICSMFFKIKFLMMVYALGGALIMMLYL 250
>L23648-5|AAN63385.1| 381|Caenorhabditis elegans Cyclin t protein
1.2, isoform b protein.
Length = 381
Score = 29.9 bits (64), Expect = 0.95
Identities = 18/92 (19%), Positives = 39/92 (42%), Gaps = 4/92 (4%)
Frame = +2
Query: 185 VPSIILPQGYIQTHRQTDRQEFK----PADGAVNLPEPRRTTPSSIFNNCIIMISDLSRE 352
V S + P G ++ D + +K P + + P R + + N ++ + +
Sbjct: 121 VSSTVTPSGSSSNLKKIDLESYKGRPKPLSNSSDSPSTRPSFLPDVKNQKVVEQELMEQR 180
Query: 353 TSEWRRRILKKNPHKYTIKTHPYTHRETYTRA 448
E ++ + +N H+ + +HP H T + A
Sbjct: 181 MKEAAQQKIHRNGHRPSSSSHPLHHHSTSSSA 212
>L23648-4|AAA28033.2| 555|Caenorhabditis elegans Cyclin t protein
1.2, isoform a protein.
Length = 555
Score = 29.9 bits (64), Expect = 0.95
Identities = 18/92 (19%), Positives = 39/92 (42%), Gaps = 4/92 (4%)
Frame = +2
Query: 185 VPSIILPQGYIQTHRQTDRQEFK----PADGAVNLPEPRRTTPSSIFNNCIIMISDLSRE 352
V S + P G ++ D + +K P + + P R + + N ++ + +
Sbjct: 295 VSSTVTPSGSSSNLKKIDLESYKGRPKPLSNSSDSPSTRPSFLPDVKNQKVVEQELMEQR 354
Query: 353 TSEWRRRILKKNPHKYTIKTHPYTHRETYTRA 448
E ++ + +N H+ + +HP H T + A
Sbjct: 355 MKEAAQQKIHRNGHRPSSSSHPLHHHSTSSSA 386
>AL132860-24|CAB60506.1| 767|Caenorhabditis elegans Hypothetical
protein Y56A3A.30 protein.
Length = 767
Score = 27.9 bits (59), Expect = 3.8
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +2
Query: 152 SAASETDKARAVPSIILPQGYIQTHRQ-TDRQEFKPADGAVNLPEPRRTTP 301
S TD+A + P P+ R+ D E ADG +P+P+R P
Sbjct: 617 STVKPTDEAHSPPIQAQPKKKATPRRKKADDVETVVADGTATIPKPKRKRP 667
>U61951-3|AAB03158.4| 1783|Caenorhabditis elegans Egg laying defective
protein 19,isoform a protein.
Length = 1783
Score = 27.1 bits (57), Expect = 6.7
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +2
Query: 278 PEPRRTTPSSIFNNCIIMISDLSRETSEWRRRILK 382
PEP+ P S+FNN + +S ++ RI K
Sbjct: 1574 PEPQHRRPHSLFNNLVHRLSGAGSKSPTEHERIEK 1608
>U61951-2|AAM75372.1| 1877|Caenorhabditis elegans Egg laying defective
protein 19,isoform b protein.
Length = 1877
Score = 27.1 bits (57), Expect = 6.7
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +2
Query: 278 PEPRRTTPSSIFNNCIIMISDLSRETSEWRRRILK 382
PEP+ P S+FNN + +S ++ RI K
Sbjct: 1574 PEPQHRRPHSLFNNLVHRLSGAGSKSPTEHERIEK 1608
>AF023602-1|AAC47755.1| 1783|Caenorhabditis elegans putative L-type
calcium channelalpha 1 subunit protein.
Length = 1783
Score = 27.1 bits (57), Expect = 6.7
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +2
Query: 278 PEPRRTTPSSIFNNCIIMISDLSRETSEWRRRILK 382
PEP+ P S+FNN + +S ++ RI K
Sbjct: 1574 PEPQHRRPHSLFNNLVHRLSGAGSKSPTEHERIEK 1608
>Z79755-7|CAB02103.1| 466|Caenorhabditis elegans Hypothetical
protein F43G9.10 protein.
Length = 466
Score = 26.6 bits (56), Expect = 8.9
Identities = 14/40 (35%), Positives = 26/40 (65%), Gaps = 4/40 (10%)
Frame = +3
Query: 153 VQRVRLTRH----APSHQ*YYHKDTYKHTDRQTDRNSNRR 260
+Q+V+++R+ AP + Y D+ +DR+TDR+ +RR
Sbjct: 40 MQKVKVSRYVAGKAPEYARNYDSDS-SESDRETDRDDDRR 78
>AL032632-5|CAA21585.1| 297|Caenorhabditis elegans Hypothetical
protein Y11D7A.9 protein.
Length = 297
Score = 26.6 bits (56), Expect = 8.9
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = -2
Query: 459 LMNYARVYVSLCVYGCVFIVYLCGFFFKIRRRHSLV 352
L Y+ V++++C +GC F F +R+ +V
Sbjct: 246 LCEYSGVFLNICFHGCAFFDIRYKVTFSVRKIEDVV 281
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,952,310
Number of Sequences: 27780
Number of extensions: 186909
Number of successful extensions: 639
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 638
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 839684522
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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