BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0002_N10 (469 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 25 0.54 AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 23 2.2 AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein. 22 3.8 DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 21 6.6 DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 21 6.6 DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 21 6.6 DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 21 6.6 DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 21 6.6 DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 21 6.6 DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 21 6.6 DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 21 6.6 DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 21 6.6 DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 21 6.6 DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 21 6.6 DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 21 6.6 DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 21 6.6 DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 21 6.6 DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 21 6.6 DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 21 6.6 DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 21 6.6 DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 21 6.6 DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 21 6.6 DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 21 6.6 DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 21 6.6 DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 21 6.6 DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 21 6.6 DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 21 6.6 DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 21 6.6 DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 21 6.6 AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 21 6.6 AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 21 6.6 AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 21 6.6 AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 21 6.6 AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 21 6.6 AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 21 6.6 AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 21 6.6 AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 21 6.6 AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 21 6.6 AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 21 6.6 AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 21 6.6 AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 21 6.6 >AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor protein. Length = 501 Score = 24.6 bits (51), Expect = 0.54 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = -3 Query: 443 VCMSLCVCTDVFLLCIYVDFFLKSADAIRSFLST 342 + + VC F + V FLK+ DAI +FLS+ Sbjct: 377 IMSAFIVCWLPFFVLALVRPFLKNPDAIPAFLSS 410 >AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice variant B protein. Length = 810 Score = 22.6 bits (46), Expect = 2.2 Identities = 7/32 (21%), Positives = 19/32 (59%) Frame = +2 Query: 269 VNLPEPRRTTPSSIFNNCIIMISDLSRETSEW 364 +NL R +++ N C++ +++ ++ S+W Sbjct: 468 MNLEISTRPKSNTVENACVLKNTEIFKDKSDW 499 >AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein. Length = 366 Score = 21.8 bits (44), Expect = 3.8 Identities = 9/26 (34%), Positives = 14/26 (53%) Frame = -3 Query: 176 PCQSHSLHLYYINPRLHRSQILLQRS 99 P + L +Y + LH Q+L Q+S Sbjct: 61 PPEHRDLPIYQSHHHLHHHQVLYQQS 86 >DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex determiner protein. Length = 179 Score = 21.0 bits (42), Expect = 6.6 Identities = 7/8 (87%), Positives = 7/8 (87%) Frame = -1 Query: 373 PPTPFARF 350 PPTPF RF Sbjct: 151 PPTPFPRF 158 >DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex determiner protein. Length = 179 Score = 21.0 bits (42), Expect = 6.6 Identities = 7/8 (87%), Positives = 7/8 (87%) Frame = -1 Query: 373 PPTPFARF 350 PPTPF RF Sbjct: 151 PPTPFPRF 158 >DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex determiner protein. Length = 179 Score = 21.0 bits (42), Expect = 6.6 Identities = 7/8 (87%), Positives = 7/8 (87%) Frame = -1 Query: 373 PPTPFARF 350 PPTPF RF Sbjct: 151 PPTPFPRF 158 >DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.0 bits (42), Expect = 6.6 Identities = 7/8 (87%), Positives = 7/8 (87%) Frame = -1 Query: 373 PPTPFARF 350 PPTPF RF Sbjct: 153 PPTPFPRF 160 >DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.0 bits (42), Expect = 6.6 Identities = 7/8 (87%), Positives = 7/8 (87%) Frame = -1 Query: 373 PPTPFARF 350 PPTPF RF Sbjct: 153 PPTPFPRF 160 >DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.0 bits (42), Expect = 6.6 Identities = 7/8 (87%), Positives = 7/8 (87%) Frame = -1 Query: 373 PPTPFARF 350 PPTPF RF Sbjct: 153 PPTPFPRF 160 >DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.0 bits (42), Expect = 6.6 Identities = 7/8 (87%), Positives = 7/8 (87%) Frame = -1 Query: 373 PPTPFARF 350 PPTPF RF Sbjct: 153 PPTPFPRF 160 >DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.0 bits (42), Expect = 6.6 Identities = 7/8 (87%), Positives = 7/8 (87%) Frame = -1 Query: 373 PPTPFARF 350 PPTPF RF Sbjct: 153 PPTPFPRF 160 >DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.0 bits (42), Expect = 6.6 Identities = 7/8 (87%), Positives = 7/8 (87%) Frame = -1 Query: 373 PPTPFARF 350 PPTPF RF Sbjct: 153 PPTPFPRF 160 >DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex determiner protein. Length = 185 Score = 21.0 bits (42), Expect = 6.6 Identities = 7/8 (87%), Positives = 7/8 (87%) Frame = -1 Query: 373 PPTPFARF 350 PPTPF RF Sbjct: 157 PPTPFPRF 164 >DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.0 bits (42), Expect = 6.6 Identities = 7/8 (87%), Positives = 7/8 (87%) Frame = -1 Query: 373 PPTPFARF 350 PPTPF RF Sbjct: 153 PPTPFPRF 160 >DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex determiner protein. Length = 180 Score = 21.0 bits (42), Expect = 6.6 Identities = 7/8 (87%), Positives = 7/8 (87%) Frame = -1 Query: 373 PPTPFARF 350 PPTPF RF Sbjct: 152 PPTPFPRF 159 >DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex determiner protein. Length = 180 Score = 21.0 bits (42), Expect = 6.6 Identities = 7/8 (87%), Positives = 7/8 (87%) Frame = -1 Query: 373 PPTPFARF 350 PPTPF RF Sbjct: 152 PPTPFPRF 159 >DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex determiner protein. Length = 175 Score = 21.0 bits (42), Expect = 6.6 Identities = 7/8 (87%), Positives = 7/8 (87%) Frame = -1 Query: 373 PPTPFARF 350 PPTPF RF Sbjct: 147 PPTPFPRF 154 >DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex determiner protein. Length = 175 Score = 21.0 bits (42), Expect = 6.6 Identities = 7/8 (87%), Positives = 7/8 (87%) Frame = -1 Query: 373 PPTPFARF 350 PPTPF RF Sbjct: 147 PPTPFPRF 154 >DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex determiner protein. Length = 175 Score = 21.0 bits (42), Expect = 6.6 Identities = 7/8 (87%), Positives = 7/8 (87%) Frame = -1 Query: 373 PPTPFARF 350 PPTPF RF Sbjct: 147 PPTPFPRF 154 >DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex determiner protein. Length = 175 Score = 21.0 bits (42), Expect = 6.6 Identities = 7/8 (87%), Positives = 7/8 (87%) Frame = -1 Query: 373 PPTPFARF 350 PPTPF RF Sbjct: 147 PPTPFPRF 154 >DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex determiner protein. Length = 185 Score = 21.0 bits (42), Expect = 6.6 Identities = 7/8 (87%), Positives = 7/8 (87%) Frame = -1 Query: 373 PPTPFARF 350 PPTPF RF Sbjct: 158 PPTPFPRF 165 >DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex determiner protein. Length = 185 Score = 21.0 bits (42), Expect = 6.6 Identities = 7/8 (87%), Positives = 7/8 (87%) Frame = -1 Query: 373 PPTPFARF 350 PPTPF RF Sbjct: 158 PPTPFPRF 165 >DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex determiner protein. Length = 189 Score = 21.0 bits (42), Expect = 6.6 Identities = 7/8 (87%), Positives = 7/8 (87%) Frame = -1 Query: 373 PPTPFARF 350 PPTPF RF Sbjct: 161 PPTPFPRF 168 >DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex determiner protein. Length = 179 Score = 21.0 bits (42), Expect = 6.6 Identities = 7/8 (87%), Positives = 7/8 (87%) Frame = -1 Query: 373 PPTPFARF 350 PPTPF RF Sbjct: 151 PPTPFPRF 158 >DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex determiner protein. Length = 184 Score = 21.0 bits (42), Expect = 6.6 Identities = 7/8 (87%), Positives = 7/8 (87%) Frame = -1 Query: 373 PPTPFARF 350 PPTPF RF Sbjct: 156 PPTPFPRF 163 >DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex determiner protein. Length = 184 Score = 21.0 bits (42), Expect = 6.6 Identities = 7/8 (87%), Positives = 7/8 (87%) Frame = -1 Query: 373 PPTPFARF 350 PPTPF RF Sbjct: 156 PPTPFPRF 163 >DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex determiner protein. Length = 184 Score = 21.0 bits (42), Expect = 6.6 Identities = 7/8 (87%), Positives = 7/8 (87%) Frame = -1 Query: 373 PPTPFARF 350 PPTPF RF Sbjct: 156 PPTPFPRF 163 >DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.0 bits (42), Expect = 6.6 Identities = 7/8 (87%), Positives = 7/8 (87%) Frame = -1 Query: 373 PPTPFARF 350 PPTPF RF Sbjct: 153 PPTPFPRF 160 >DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex determiner protein. Length = 191 Score = 21.0 bits (42), Expect = 6.6 Identities = 7/8 (87%), Positives = 7/8 (87%) Frame = -1 Query: 373 PPTPFARF 350 PPTPF RF Sbjct: 163 PPTPFPRF 170 >AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex determiner protein. Length = 400 Score = 21.0 bits (42), Expect = 6.6 Identities = 7/8 (87%), Positives = 7/8 (87%) Frame = -1 Query: 373 PPTPFARF 350 PPTPF RF Sbjct: 372 PPTPFPRF 379 >AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex determiner protein. Length = 406 Score = 21.0 bits (42), Expect = 6.6 Identities = 7/8 (87%), Positives = 7/8 (87%) Frame = -1 Query: 373 PPTPFARF 350 PPTPF RF Sbjct: 378 PPTPFPRF 385 >AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex determiner protein. Length = 406 Score = 21.0 bits (42), Expect = 6.6 Identities = 7/8 (87%), Positives = 7/8 (87%) Frame = -1 Query: 373 PPTPFARF 350 PPTPF RF Sbjct: 378 PPTPFPRF 385 >AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex determiner protein. Length = 426 Score = 21.0 bits (42), Expect = 6.6 Identities = 7/8 (87%), Positives = 7/8 (87%) Frame = -1 Query: 373 PPTPFARF 350 PPTPF RF Sbjct: 398 PPTPFPRF 405 >AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex determiner protein. Length = 396 Score = 21.0 bits (42), Expect = 6.6 Identities = 7/8 (87%), Positives = 7/8 (87%) Frame = -1 Query: 373 PPTPFARF 350 PPTPF RF Sbjct: 368 PPTPFPRF 375 >AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex determiner protein. Length = 407 Score = 21.0 bits (42), Expect = 6.6 Identities = 7/8 (87%), Positives = 7/8 (87%) Frame = -1 Query: 373 PPTPFARF 350 PPTPF RF Sbjct: 379 PPTPFPRF 386 >AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex determiner protein. Length = 407 Score = 21.0 bits (42), Expect = 6.6 Identities = 7/8 (87%), Positives = 7/8 (87%) Frame = -1 Query: 373 PPTPFARF 350 PPTPF RF Sbjct: 379 PPTPFPRF 386 >AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex determiner protein. Length = 396 Score = 21.0 bits (42), Expect = 6.6 Identities = 7/8 (87%), Positives = 7/8 (87%) Frame = -1 Query: 373 PPTPFARF 350 PPTPF RF Sbjct: 368 PPTPFPRF 375 >AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex determiner protein. Length = 413 Score = 21.0 bits (42), Expect = 6.6 Identities = 7/8 (87%), Positives = 7/8 (87%) Frame = -1 Query: 373 PPTPFARF 350 PPTPF RF Sbjct: 386 PPTPFPRF 393 >AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex determiner protein. Length = 400 Score = 21.0 bits (42), Expect = 6.6 Identities = 7/8 (87%), Positives = 7/8 (87%) Frame = -1 Query: 373 PPTPFARF 350 PPTPF RF Sbjct: 372 PPTPFPRF 379 >AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex determiner protein. Length = 418 Score = 21.0 bits (42), Expect = 6.6 Identities = 7/8 (87%), Positives = 7/8 (87%) Frame = -1 Query: 373 PPTPFARF 350 PPTPF RF Sbjct: 390 PPTPFPRF 397 >AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex determiner protein. Length = 428 Score = 21.0 bits (42), Expect = 6.6 Identities = 7/8 (87%), Positives = 7/8 (87%) Frame = -1 Query: 373 PPTPFARF 350 PPTPF RF Sbjct: 400 PPTPFPRF 407 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 124,404 Number of Sequences: 438 Number of extensions: 2523 Number of successful extensions: 41 Number of sequences better than 10.0: 41 Number of HSP's better than 10.0 without gapping: 41 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 41 length of database: 146,343 effective HSP length: 53 effective length of database: 123,129 effective search space used: 12559158 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -