Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_N08
         (480 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    23   1.9  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    22   3.4  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   7.8  

>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +3

Query: 42  NDYFFYSFIYSINISKFDSCTDLYN 116
           N  F + FI    +S F+SCT L N
Sbjct: 390 NFMFSFGFILLRFLSVFESCTRLNN 414


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 313 CVGLYNCEHITYMMLDKTR 369
           C  LYNC H T +++  +R
Sbjct: 142 CQFLYNCFHSTLLLMILSR 160


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 86  TDINRIYETVEKII 45
           T++ R Y+ VEKI+
Sbjct: 65  TNLKRFYKVVEKIL 78


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,598
Number of Sequences: 336
Number of extensions: 2627
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11247091
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)