Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_N06
(583 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces... 288 5e-79
SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|ch... 171 8e-44
SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha 2|Schizosacchar... 165 4e-42
SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|... 133 2e-32
SPBC354.13 |rga6||GTPase activating protein Rga6|Schizosaccharom... 29 0.50
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 28 0.87
SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual 27 1.5
SPAC27D7.03c |mei2||RNA-binding protein involved in meiosis Mei2... 27 2.0
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 27 2.6
SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein Pof11|Schizos... 27 2.6
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 26 4.6
SPAC23A1.19c ||SPAC26H5.01c|RecQ type DNA helicase Hrq1 |Schizos... 25 6.1
SPAC8F11.09c |nnt1||nicotinamide N-methyltransferase Nnt1 |Schiz... 25 6.1
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 25 6.1
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 8.1
SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|... 25 8.1
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 25 8.1
>SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 448
Score = 288 bits (706), Expect = 5e-79
Identities = 131/193 (67%), Positives = 154/193 (79%)
Frame = +1
Query: 1 GDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGA 180
G S+ Q ER+NVY+NEA+GGKYVPRA+LVDLEPGTMD+V+SG FG +FRPDN ++GQSGA
Sbjct: 38 GTSEAQHERLNVYFNEAAGGKYVPRAVLVDLEPGTMDAVKSGKFGNLFRPDNIIYGQSGA 97
Query: 181 GNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIRE 360
GN WAKGHYTEGAEL D+VLDVVR+E+E+CD LQGFQ KIRE
Sbjct: 98 GNIWAKGHYTEGAELADAVLDVVRREAEACDALQGFQLTHSLGGGTGSGMGTLLLSKIRE 157
Query: 361 EYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDXEALYDICFRTLKL 540
EYPDR+M T+SV P+PK SDTVVEPYNATLS+HQLVEN+DET+CID EAL I TLK+
Sbjct: 158 EYPDRMMATFSVAPAPKSSDTVVEPYNATLSMHQLVENSDETFCIDNEALSSIFANTLKI 217
Query: 541 STPTYGDLNHLVS 579
+P+Y DLNHLVS
Sbjct: 218 KSPSYDDLNHLVS 230
>SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 455
Score = 171 bits (415), Expect = 8e-44
Identities = 75/181 (41%), Positives = 114/181 (62%)
Frame = +1
Query: 37 YYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEG 216
+++E GK+VPR+I VDLEP +D VR+GP+ +F P+ V G+ A NN+A+GHYT G
Sbjct: 56 FFSETGQGKFVPRSIYVDLEPNVIDQVRTGPYKDLFHPEQMVTGKEDASNNYARGHYTVG 115
Query: 217 AELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSV 396
E++DSVL+ +R+ +++C LQGF ++ EY + +SV
Sbjct: 116 KEMIDSVLERIRRMADNCSGLQGFLVFHSFGGGTGSGLGALLLERLNMEYGKKSNLQFSV 175
Query: 397 VPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDXEALYDICFRTLKLSTPTYGDLNHLV 576
P+P+VS +VVEPYN+ L+ H ++N+D T+ +D EA YDIC R L + PTY +LN L+
Sbjct: 176 YPAPQVSTSVVEPYNSVLTTHATLDNSDCTFMVDNEACYDICRRNLDIERPTYENLNRLI 235
Query: 577 S 579
+
Sbjct: 236 A 236
>SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha
2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 449
Score = 165 bits (401), Expect = 4e-42
Identities = 73/183 (39%), Positives = 111/183 (60%)
Frame = +1
Query: 31 NVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 210
+ +++E GKYVPR+I VDLEP +D VR+GP+ +F P+ + G+ A NN+A+GHYT
Sbjct: 50 STFFSETGQGKYVPRSIYVDLEPNVIDQVRTGPYRDLFHPEQLITGKEDASNNYARGHYT 109
Query: 211 EGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTY 390
G ELVD V D +R+ +++C LQGF ++ EY + +
Sbjct: 110 VGKELVDEVTDKIRRIADNCSGLQGFLVFHSFGGGTGSGFGALLLERLAMEYTKKSKLQF 169
Query: 391 SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDXEALYDICFRTLKLSTPTYGDLNH 570
SV P+P+VS +VVEPYN+ L+ H ++ D T+ +D E+ YDIC R L + P+Y +LN
Sbjct: 170 SVYPAPQVSTSVVEPYNSVLTTHATLDLADCTFMVDNESCYDICRRNLDIERPSYENLNR 229
Query: 571 LVS 579
L++
Sbjct: 230 LIA 232
>SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 446
Score = 133 bits (321), Expect = 2e-32
Identities = 63/190 (33%), Positives = 107/190 (56%), Gaps = 3/190 (1%)
Frame = +1
Query: 19 LERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQS--GAGNNW 192
++R +V++ ++ +Y+PRAIL+DLEP ++++ S +G ++ P+N + ++ GAGNNW
Sbjct: 45 VDRKDVFFYQSDDTRYIPRAILIDLEPRVVNNILSDTYGSLYNPENILITKNGGGAGNNW 104
Query: 193 AKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPD 372
A G Y+ + + ++D++ +E++ D L+GF ++ + YP
Sbjct: 105 ANG-YSHAERIFEDIMDMIDREADGSDSLEGFSLLHSIAGGTGSGLGSFLLERLNDRYPK 163
Query: 373 RIMNTYSVVP-SPKVSDTVVEPYNATLSVHQLVENTDETYCIDXEALYDICFRTLKLSTP 549
+I+ TYSV P S VSD VV+PYN+ L++ +L N D +D AL I L P
Sbjct: 164 KIIQTYSVFPNSQSVSDVVVQPYNSLLALKRLTLNADSVVVLDNAALAHIAADRLHTQNP 223
Query: 550 TYGDLNHLVS 579
T+ N LVS
Sbjct: 224 TFHQQNQLVS 233
>SPBC354.13 |rga6||GTPase activating protein
Rga6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 733
Score = 29.1 bits (62), Expect = 0.50
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
Frame = +2
Query: 299 TLSE-AVPAPVWAHYLSQRSVKSTPTES*THTQSSP----RPKYQTPSSNPTMRLSQCTN 463
T+S+ AVP+ +A+ +S RSV S T+S T++SP K S T+ S TN
Sbjct: 643 TVSDTAVPSMSFANNISSRSVISAATDSKPSTRTSPPFVNNTKPIVAKSPVTVTASSETN 702
Query: 464 --S*KTQTKHTVSXTRHSTIFASARSN 538
S K K + + + +F RSN
Sbjct: 703 KKSQKINKKASPRVSLWTKLFGKFRSN 729
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 28.3 bits (60), Expect = 0.87
Identities = 20/77 (25%), Positives = 37/77 (48%)
Frame = +2
Query: 353 SVKSTPTES*THTQSSPRPKYQTPSSNPTMRLSQCTNS*KTQTKHTVSXTRHSTIFASAR 532
S S+P+ S T T +SP + SS+ + S ++S + + + S + S+ +S+
Sbjct: 139 SSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 198
Query: 533 SNYLHPPMEISIT*SPS 583
S+ + IT S S
Sbjct: 199 SSSSSSSSSVPITSSTS 215
Score = 25.4 bits (53), Expect = 6.1
Identities = 15/70 (21%), Positives = 34/70 (48%)
Frame = +2
Query: 329 WAHYLSQRSVKSTPTES*THTQSSPRPKYQTPSSNPTMRLSQCTNS*KTQTKHTVSXTRH 508
W+ YL+ V T S + + ++ +PSS+ T + ++S + + + S +
Sbjct: 113 WSVYLTGNGVLQTTVSSSSVSSTTSSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSS 172
Query: 509 STIFASARSN 538
S+ +S+ S+
Sbjct: 173 SSSSSSSSSS 182
>SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual
Length = 234
Score = 27.5 bits (58), Expect = 1.5
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 193 AKGHYTEGAELVDSVLDVVRKESESCDCLQ 282
A+GH G ELV + D +RK+SE+ L+
Sbjct: 183 AEGHPDVGVELVRAGADTLRKDSENHTALE 212
>SPAC27D7.03c |mei2||RNA-binding protein involved in meiosis
Mei2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 750
Score = 27.1 bits (57), Expect = 2.0
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = +2
Query: 131 SDRYSALTTLFSDSPAPVTTGPRDTTQRALS*STQFLT*SEK-NPNHVIVYKDSNSHTLS 307
++ Y +TL P+P+ T+ + S S +LT ++ PN V + N++ S
Sbjct: 45 NEHYPPKSTLLLSGPSPIRNIQLSATKSSESNSIDYLTDTQNIFPNFV---NNENNYQFS 101
Query: 308 EAVPAPVWAHYLSQRSVKST 367
A P+ A + +R V +T
Sbjct: 102 TAPLNPIDACRVGERKVFTT 121
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 26.6 bits (56), Expect = 2.6
Identities = 28/117 (23%), Positives = 42/117 (35%), Gaps = 1/117 (0%)
Frame = +2
Query: 179 PVTTGPRDTTQRALS*STQFLT*SEKNPNHVIVYKDSNSHTLSEAVPAPVWAHYL-SQRS 355
PVT+ P TT S S + + + N+ I + T L +
Sbjct: 485 PVTSTPLTTTNCTTSTSVPYTSTPVTSSNYTISSSTPVTSTPVTTTNCTTSTSVLYTSTP 544
Query: 356 VKSTPTES*THTQSSPRPKYQTPSSNPTMRLSQCTNS*KTQTKHTVSXTRHSTIFAS 526
V STP + T S+ P TP ++ +S T T T T S ++ S
Sbjct: 545 VTSTPLATTNCTTSTSVPYTSTPVTSSNYTISSSTPVTSTPVTTTNCTTSTSVLYTS 601
>SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein
Pof11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 506
Score = 26.6 bits (56), Expect = 2.6
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +1
Query: 124 GPFGQIFRPDNFVFGQSGAG-NNWAKGHYTEGAEL 225
GP+G +F P F+F +G NW+ Y E A L
Sbjct: 157 GPYGTMFLPQQFIFDSNGRPLLNWSY-LYKEHAHL 190
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 25.8 bits (54), Expect = 4.6
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +2
Query: 260 PNHVIVYKDSNSHTLSEAVPAPVWAHYLSQRSVKSTPTES 379
P VIV +DS S L+ +P P H L P+ S
Sbjct: 23 PQEVIVIEDSASPRLTPNLPPPFSVHQLQSFVPPQPPSSS 62
>SPAC23A1.19c ||SPAC26H5.01c|RecQ type DNA helicase Hrq1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1063
Score = 25.4 bits (53), Expect = 6.1
Identities = 12/44 (27%), Positives = 20/44 (45%)
Frame = +1
Query: 145 RPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDC 276
RP +F G++ G + E D ++ + + ESCDC
Sbjct: 955 RPSRLIF-YDNCGDSSGAGLCNKAYEHTDELITMAIERIESCDC 997
>SPAC8F11.09c |nnt1||nicotinamide N-methyltransferase Nnt1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 255
Score = 25.4 bits (53), Expect = 6.1
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -3
Query: 182 PAPDCPKTKLSGRNICPKGPERTESMVPGSRS 87
P+ PK L R I P GPE + + GS S
Sbjct: 20 PSTPPPKEVLHTRVIVPNGPEEIKLRLVGSHS 51
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 25.4 bits (53), Expect = 6.1
Identities = 27/79 (34%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Frame = +2
Query: 287 SNSHTLSEAVPAPVWAHYLSQRSVKSTPTES*THTQSSPRPKYQTPSSNPTMR--LSQCT 460
SNS S VP+ V H S KS T T + SS + + T S+ TM +S T
Sbjct: 3672 SNSKVTSNKVPSTVSPHSSSISDTKSPATV--TISSSSGQFTHSTFSTGSTMHNTVSHAT 3729
Query: 461 N-S*KTQTKHTVSXTRHST 514
+ S T H + T ST
Sbjct: 3730 STSSSFTTSHLPTNTLAST 3748
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 25.0 bits (52), Expect = 8.1
Identities = 31/102 (30%), Positives = 41/102 (40%), Gaps = 5/102 (4%)
Frame = +2
Query: 293 SHTLSEAVPAPVWAH-YLSQRSVKSTPTES*THTQ---SSPRPKYQTPSSNPTMR-LSQC 457
S T SE P+ + L SV S S T + SS P ++ T LS
Sbjct: 122 SPTSSEYTPSSTESSSLLDPSSVSSAILPSSTSVEVSISSSSLSSSDPLTSSTFSSLSSS 181
Query: 458 TNS*KTQTKHTVSXTRHSTIFASARSNYLHPPMEISIT*SPS 583
T+S + T S T S S S+YL +S + SPS
Sbjct: 182 TSSSQPSVSSTSSSTFSSAAPTSTSSSYLSSSSVVSSSSSPS 223
>SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 530
Score = 25.0 bits (52), Expect = 8.1
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Frame = +2
Query: 314 VPAPVWAHYLSQRSVKST-PTES*THTQSSPRPKYQTPSSNPTMRLSQCTNS*KTQTKHT 490
V APVW++ S T T S S P ++ SS P ++ + T+ T
Sbjct: 121 VTAPVWSNTSVPVSTPETSATSSSEFFTSYPATSSESSSSYPASSTEVASSYSASSTEVT 180
Query: 491 VSXTRHSTIFASARSNYLHP 550
S S + A++ S+Y+ P
Sbjct: 181 SSYPASSEV-ATSTSSYVAP 199
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 25.0 bits (52), Expect = 8.1
Identities = 13/52 (25%), Positives = 29/52 (55%)
Frame = +2
Query: 383 THTQSSPRPKYQTPSSNPTMRLSQCTNS*KTQTKHTVSXTRHSTIFASARSN 538
T + S+P + SS+P+ S+ ++S K+ + + S S+ +S++S+
Sbjct: 148 TSSSSTPSSSSSSSSSSPSSSSSKSSSSSKSSSSSSSSSKSSSSSSSSSKSS 199
Score = 25.0 bits (52), Expect = 8.1
Identities = 17/62 (27%), Positives = 33/62 (53%)
Frame = +2
Query: 353 SVKSTPTES*THTQSSPRPKYQTPSSNPTMRLSQCTNS*KTQTKHTVSXTRHSTIFASAR 532
S STP+ S + + SSP + SS+ + S ++S K+ + + S S+ +S++
Sbjct: 149 SSSSTPSSSSSSSSSSPSSS-SSKSSSSSKSSSSSSSSSKSSSSSSSSSKSSSSSSSSSK 207
Query: 533 SN 538
S+
Sbjct: 208 SS 209
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.136 0.405
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,202,168
Number of Sequences: 5004
Number of extensions: 43300
Number of successful extensions: 168
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 161
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 250133048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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