Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_N06
(583 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 354 3e-98
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 351 3e-97
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 345 1e-95
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 345 1e-95
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 345 1e-95
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 345 2e-95
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 227 4e-60
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 227 4e-60
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 169 1e-42
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 164 4e-41
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 163 6e-41
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 163 6e-41
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 163 6e-41
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 163 6e-41
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 163 6e-41
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 162 1e-40
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 162 2e-40
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 160 8e-40
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 160 8e-40
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 159 1e-39
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 159 1e-39
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 159 1e-39
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 159 1e-39
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 155 2e-38
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 124 3e-29
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 124 3e-29
Z68121-1|CAA92204.2| 174|Caenorhabditis elegans Hypothetical pr... 30 1.0
AF302237-1|AAG21385.1| 174|Caenorhabditis elegans GATA-type tra... 30 1.0
AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal elemen... 30 1.0
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 30 1.4
U28943-17|AAK68292.2| 811|Caenorhabditis elegans Clc-type chlo... 28 4.2
U28943-16|AAK68291.1| 1001|Caenorhabditis elegans Clc-type chlo... 28 4.2
AF319614-1|AAG49524.1| 1001|Caenorhabditis elegans CLC-type chlo... 28 4.2
AF173172-1|AAF13165.1| 811|Caenorhabditis elegans CLC chloride ... 28 4.2
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 28 5.6
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 28 5.6
U00044-5|AAK93857.1| 174|Caenorhabditis elegans Mesoderm and en... 28 5.6
AF302238-1|AAG21386.1| 174|Caenorhabditis elegans GATA-type tra... 28 5.6
Z69634-4|CAA93455.2| 674|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z46787-6|CAA86744.1| 392|Caenorhabditis elegans Hypothetical pr... 27 9.7
AC024776-1|AAK68468.1| 338|Caenorhabditis elegans Hypothetical ... 27 9.7
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 354 bits (870), Expect = 3e-98
Identities = 164/194 (84%), Positives = 172/194 (88%)
Frame = +1
Query: 1 GDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGA 180
GDSDLQLERINVYYNEASGGKYVPRA LVDLEPGTMDSVR+GPFGQ+FRPDNFVFGQSGA
Sbjct: 38 GDSDLQLERINVYYNEASGGKYVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGA 97
Query: 181 GNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIRE 360
GNNWAKGHYTEGAELVD+VLDVVRKE+ESCDCLQGFQ KIRE
Sbjct: 98 GNNWAKGHYTEGAELVDNVLDVVRKEAESCDCLQGFQMTHSLGGGTGSGMGTLLISKIRE 157
Query: 361 EYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDXEALYDICFRTLKL 540
EYPDRIM T+SVVPSPKVSDTVVEPYNATLSVHQLVENTDET+CID EALYDICFRTLKL
Sbjct: 158 EYPDRIMMTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKL 217
Query: 541 STPTYGDLNHLVSL 582
+TPTYGDLNHLVS+
Sbjct: 218 TTPTYGDLNHLVSM 231
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 351 bits (862), Expect = 3e-97
Identities = 161/194 (82%), Positives = 172/194 (88%)
Frame = +1
Query: 1 GDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGA 180
G+SDLQLERINVYYNEA+GGKYVPRA+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGA
Sbjct: 38 GESDLQLERINVYYNEANGGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGA 97
Query: 181 GNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIRE 360
GNNWAKGHYTEGAELVD+VLDVVRKE+E CDCLQGFQ KIRE
Sbjct: 98 GNNWAKGHYTEGAELVDNVLDVVRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIRE 157
Query: 361 EYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDXEALYDICFRTLKL 540
EYPDRIM+++SVVPSPKVSDTVVEPYNATLSVHQLVENTDET+CID EALYDICFRTLKL
Sbjct: 158 EYPDRIMSSFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKL 217
Query: 541 STPTYGDLNHLVSL 582
S PTYGDLNHLVS+
Sbjct: 218 SNPTYGDLNHLVSV 231
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 345 bits (849), Expect = 1e-95
Identities = 160/193 (82%), Positives = 168/193 (87%)
Frame = +1
Query: 1 GDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGA 180
GDSDLQLERINVYYNEA KYVPRA+LVDLEPGTMDSVRSGPFGQ+FRPDN+VFGQSGA
Sbjct: 38 GDSDLQLERINVYYNEAGSNKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGA 97
Query: 181 GNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIRE 360
GNNWAKGHYTEGAELVD+VLDVVRKE+ES DCLQGFQ KIRE
Sbjct: 98 GNNWAKGHYTEGAELVDNVLDVVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIRE 157
Query: 361 EYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDXEALYDICFRTLKL 540
EYPDRIMNT+SVVPSPKVSDTVVEPYNATLSVHQLVENTD T+CID EALYDICFRTLKL
Sbjct: 158 EYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDSTFCIDNEALYDICFRTLKL 217
Query: 541 STPTYGDLNHLVS 579
+TPTYGDLNHLVS
Sbjct: 218 TTPTYGDLNHLVS 230
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 345 bits (849), Expect = 1e-95
Identities = 160/193 (82%), Positives = 168/193 (87%)
Frame = +1
Query: 1 GDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGA 180
GDSDLQLERINVYYNEA KYVPRA+LVDLEPGTMDSVRSGPFGQ+FRPDN+VFGQSGA
Sbjct: 38 GDSDLQLERINVYYNEAGSNKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGA 97
Query: 181 GNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIRE 360
GNNWAKGHYTEGAELVD+VLDVVRKE+ES DCLQGFQ KIRE
Sbjct: 98 GNNWAKGHYTEGAELVDNVLDVVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIRE 157
Query: 361 EYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDXEALYDICFRTLKL 540
EYPDRIMNT+SVVPSPKVSDTVVEPYNATLSVHQLVENTD T+CID EALYDICFRTLKL
Sbjct: 158 EYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDSTFCIDNEALYDICFRTLKL 217
Query: 541 STPTYGDLNHLVS 579
+TPTYGDLNHLVS
Sbjct: 218 TTPTYGDLNHLVS 230
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 345 bits (848), Expect = 1e-95
Identities = 157/194 (80%), Positives = 171/194 (88%)
Frame = +1
Query: 1 GDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGA 180
G++DLQLERI+VYYNEA+ GKYVPRA+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGA
Sbjct: 38 GETDLQLERIDVYYNEANNGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGA 97
Query: 181 GNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIRE 360
GNNWAKGHYTEGAELVD+VLDV+RKE+E CDCLQGFQ KIRE
Sbjct: 98 GNNWAKGHYTEGAELVDNVLDVIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIRE 157
Query: 361 EYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDXEALYDICFRTLKL 540
EYPDRIM+++SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCID EALYDIC+RTLKL
Sbjct: 158 EYPDRIMSSFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICYRTLKL 217
Query: 541 STPTYGDLNHLVSL 582
+ PTYGDLNHLVSL
Sbjct: 218 TNPTYGDLNHLVSL 231
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 345 bits (847), Expect = 2e-95
Identities = 157/194 (80%), Positives = 171/194 (88%)
Frame = +1
Query: 1 GDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGA 180
G+SDLQLERI+VYYNEA+ GKYVPRA+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGA
Sbjct: 38 GESDLQLERIDVYYNEANNGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGA 97
Query: 181 GNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIRE 360
GNNWAKGHYTEGAELVD+VLDV+RKE+E CDCLQGFQ KIRE
Sbjct: 98 GNNWAKGHYTEGAELVDNVLDVIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIRE 157
Query: 361 EYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDXEALYDICFRTLKL 540
E+PDRIM+++SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCID EALYDIC+RTLKL
Sbjct: 158 EFPDRIMSSFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICYRTLKL 217
Query: 541 STPTYGDLNHLVSL 582
+ PTYGDLNHLVSL
Sbjct: 218 TNPTYGDLNHLVSL 231
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 227 bits (555), Expect = 4e-60
Identities = 106/195 (54%), Positives = 139/195 (71%), Gaps = 1/195 (0%)
Frame = +1
Query: 1 GDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGA 180
GD+ QLERI YY E G KYVPRAILVDL+P +++ VRS +G++F P+N V G+SGA
Sbjct: 38 GDNGSQLERITSYYKEMEGRKYVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGA 97
Query: 181 GNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIRE 360
GNNW++G+Y +GAE+VD VL V+R+E+E+ D L+GFQ K+RE
Sbjct: 98 GNNWSRGYYEQGAEIVDKVLSVIRREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLRE 157
Query: 361 EYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDXEALYDICFRTLKL 540
EY D+ ++T S++PS KVSDTVVEPYNA LS+ L++N DE +CID EA++DIC LKL
Sbjct: 158 EYSDKTLSTCSIIPSAKVSDTVVEPYNAILSMPHLMDNCDENFCIDNEAIFDICQYNLKL 217
Query: 541 -STPTYGDLNHLVSL 582
+ TYGDLNHL SL
Sbjct: 218 ENRVTYGDLNHLASL 232
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 227 bits (555), Expect = 4e-60
Identities = 106/195 (54%), Positives = 139/195 (71%), Gaps = 1/195 (0%)
Frame = +1
Query: 1 GDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGA 180
GD+ QLERI YY E G KYVPRAILVDL+P +++ VRS +G++F P+N V G+SGA
Sbjct: 38 GDNGSQLERITSYYKEMEGRKYVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGA 97
Query: 181 GNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIRE 360
GNNW++G+Y +GAE+VD VL V+R+E+E+ D L+GFQ K+RE
Sbjct: 98 GNNWSRGYYEQGAEIVDKVLSVIRREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLRE 157
Query: 361 EYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDXEALYDICFRTLKL 540
EY D+ ++T S++PS KVSDTVVEPYNA LS+ L++N DE +CID EA++DIC LKL
Sbjct: 158 EYSDKTLSTCSIIPSAKVSDTVVEPYNAILSMPHLMDNCDENFCIDNEAIFDICQYNLKL 217
Query: 541 -STPTYGDLNHLVSL 582
+ TYGDLNHL SL
Sbjct: 218 ENRVTYGDLNHLASL 232
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 169 bits (411), Expect = 1e-42
Identities = 73/186 (39%), Positives = 118/186 (63%)
Frame = +1
Query: 22 ERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG 201
+ + +++E+ GK+VPRAI VDLEP +D +R+G +G +F PD + G+ A NN+A+G
Sbjct: 50 QSLQAFFSESMNGKHVPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARG 109
Query: 202 HYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 381
HYT G EL+D VLD +RK++E+C+ LQGF ++ E+ +
Sbjct: 110 HYTIGKELIDVVLDRIRKQTENCEGLQGFLVFHSFGGGTGSGFSSLLMERLSVEFGKKSK 169
Query: 382 NTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDXEALYDICFRTLKLSTPTYGD 561
+SV P+P+VS +VVEPYN+ L+ H +E +D ++ +D EA+YD+C + L + P+Y +
Sbjct: 170 LEFSVYPAPQVSTSVVEPYNSILTTHTTLELSDCSFMVDNEAIYDLCRQKLHVERPSYSN 229
Query: 562 LNHLVS 579
LN L++
Sbjct: 230 LNRLIA 235
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 164 bits (399), Expect = 4e-41
Identities = 70/192 (36%), Positives = 115/192 (59%)
Frame = +1
Query: 4 DSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAG 183
D E ++++ G+YVPR+I VDLEP +D +R+G + ++F P+ + G+ A
Sbjct: 39 DQQADGESFTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAA 98
Query: 184 NNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREE 363
NN+A+GHYT G EL+D+VLD +R+ +++C LQGF ++ +
Sbjct: 99 NNYARGHYTVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVD 158
Query: 364 YPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDXEALYDICFRTLKLS 543
Y + +S+ P+P+VS VVEPYN+ L+ H +E++D + +D EA+YDIC R L +
Sbjct: 159 YGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLSVD 218
Query: 544 TPTYGDLNHLVS 579
P+Y +LN ++S
Sbjct: 219 RPSYTNLNRIIS 230
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 163 bits (397), Expect = 6e-41
Identities = 69/186 (37%), Positives = 114/186 (61%)
Frame = +1
Query: 22 ERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG 201
E ++++ G+YVPR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+G
Sbjct: 45 ESFTTFFSDTGSGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARG 104
Query: 202 HYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 381
HYT G EL+D+VLD +R+ +++C LQGF ++ +Y +
Sbjct: 105 HYTVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSK 164
Query: 382 NTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDXEALYDICFRTLKLSTPTYGD 561
+S+ P+P+VS VVEPYN+ L+ H +E++D + +D EA+YDIC R L + P+Y +
Sbjct: 165 LEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDVERPSYTN 224
Query: 562 LNHLVS 579
LN ++S
Sbjct: 225 LNRIIS 230
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 163 bits (397), Expect = 6e-41
Identities = 74/190 (38%), Positives = 117/190 (61%)
Frame = +1
Query: 10 DLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNN 189
D + E IN ++ E +GGK+VPR + VDLEP +D VR+G + +F P+ + G+ A N
Sbjct: 49 DEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANC 108
Query: 190 WAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYP 369
+A+G YT G E++D V+D V++ +E+C+ LQGF ++ EY
Sbjct: 109 YARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHSFGGGTGSGFLSLLMERLSTEYG 168
Query: 370 DRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDXEALYDICFRTLKLSTP 549
+ +++ P+P+VS ++VEPYN+ L H +E++D T+ +D EA+YDIC R L L+ P
Sbjct: 169 KKPKLEFAIYPAPQVSTSMVEPYNSILMTHTTLEHSDCTFMVDNEAIYDICRRNLDLARP 228
Query: 550 TYGDLNHLVS 579
TY +LN LV+
Sbjct: 229 TYTNLNRLVA 238
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 163 bits (397), Expect = 6e-41
Identities = 67/184 (36%), Positives = 117/184 (63%)
Frame = +1
Query: 28 INVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHY 207
+ ++++ G++VPR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHY
Sbjct: 46 LGTFFSDTGYGRHVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHY 105
Query: 208 TEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNT 387
T G E++D+ LD +R+ + +C+ LQGF ++ EY +
Sbjct: 106 TVGKEIIDTTLDRIRRLANNCEGLQGFFVFHSFGGGTGSGFTSMLMERLSAEYGKKSKLE 165
Query: 388 YSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDXEALYDICFRTLKLSTPTYGDLN 567
+S+ P+P++S +VVEPYN+ L+ H +E++D ++ +D EA+YDIC R L++S PTY +LN
Sbjct: 166 FSIYPAPQISTSVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLRVSRPTYNNLN 225
Query: 568 HLVS 579
++S
Sbjct: 226 RIIS 229
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 163 bits (397), Expect = 6e-41
Identities = 69/186 (37%), Positives = 114/186 (61%)
Frame = +1
Query: 22 ERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG 201
E ++++ G+YVPR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+G
Sbjct: 45 ESFTTFFSDTGSGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARG 104
Query: 202 HYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 381
HYT G EL+D+VLD +R+ +++C LQGF ++ +Y +
Sbjct: 105 HYTVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSK 164
Query: 382 NTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDXEALYDICFRTLKLSTPTYGD 561
+S+ P+P+VS VVEPYN+ L+ H +E++D + +D EA+YDIC R L + P+Y +
Sbjct: 165 LEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDVERPSYTN 224
Query: 562 LNHLVS 579
LN ++S
Sbjct: 225 LNRIIS 230
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 163 bits (397), Expect = 6e-41
Identities = 74/190 (38%), Positives = 117/190 (61%)
Frame = +1
Query: 10 DLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNN 189
D + E IN ++ E +GGK+VPR + VDLEP +D VR+G + +F P+ + G+ A N
Sbjct: 21 DEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANC 80
Query: 190 WAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYP 369
+A+G YT G E++D V+D V++ +E+C+ LQGF ++ EY
Sbjct: 81 YARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHSFGGGTGSGFLSLLMERLSTEYG 140
Query: 370 DRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDXEALYDICFRTLKLSTP 549
+ +++ P+P+VS ++VEPYN+ L H +E++D T+ +D EA+YDIC R L L+ P
Sbjct: 141 KKPKLEFAIYPAPQVSTSMVEPYNSILMTHTTLEHSDCTFMVDNEAIYDICRRNLDLARP 200
Query: 550 TYGDLNHLVS 579
TY +LN LV+
Sbjct: 201 TYTNLNRLVA 210
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 162 bits (394), Expect = 1e-40
Identities = 69/192 (35%), Positives = 114/192 (59%)
Frame = +1
Query: 4 DSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAG 183
D E ++++ G+YVPR+I VDLEP +D +R+G + ++F P+ + G+ A
Sbjct: 39 DQQADGESFTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAA 98
Query: 184 NNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREE 363
NN+A+GHYT G EL+D+VLD +R+ +++C LQGF ++ +
Sbjct: 99 NNYARGHYTVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVD 158
Query: 364 YPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDXEALYDICFRTLKLS 543
Y + +S+ P+P+V VVEPYN+ L+ H +E++D + +D EA+YDIC R L +
Sbjct: 159 YGKKSKLEFSIYPAPQVCTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLSVD 218
Query: 544 TPTYGDLNHLVS 579
P+Y +LN ++S
Sbjct: 219 RPSYTNLNRIIS 230
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 162 bits (393), Expect = 2e-40
Identities = 71/186 (38%), Positives = 115/186 (61%)
Frame = +1
Query: 22 ERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG 201
+ N +++E GK+VPRAI+VDLEP +D +R+G + +F P+ + G+ A NN+A+G
Sbjct: 52 DSFNTFFSETMAGKHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARG 111
Query: 202 HYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 381
HYT G E++D V+D VR+ E+C LQGF ++ +Y +
Sbjct: 112 HYTIGKEIIDVVMDRVRRLVENCRGLQGFLVFHSFGGGTGSGFTALLMERLSVDYGKKSK 171
Query: 382 NTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDXEALYDICFRTLKLSTPTYGD 561
+ + P+P+VS ++VEPYN+ L+ H +E++D ++ +D EA+YDIC R L L+ PTY +
Sbjct: 172 LEFCIYPAPQVSTSMVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDLARPTYTN 231
Query: 562 LNHLVS 579
LN L++
Sbjct: 232 LNRLIA 237
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 160 bits (388), Expect = 8e-40
Identities = 67/181 (37%), Positives = 112/181 (61%)
Frame = +1
Query: 37 YYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEG 216
++++ G+YVPR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G
Sbjct: 50 FFSDTGNGRYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVG 109
Query: 217 AELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSV 396
EL+D+ LD +R+ +++C LQGF ++ +Y + +S+
Sbjct: 110 KELIDTTLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSI 169
Query: 397 VPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDXEALYDICFRTLKLSTPTYGDLNHLV 576
P+P+VS VVEPYN+ L+ H +E++D + +D EA+YDIC R L + P+Y +LN ++
Sbjct: 170 YPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICKRNLDVDRPSYTNLNRII 229
Query: 577 S 579
S
Sbjct: 230 S 230
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 160 bits (388), Expect = 8e-40
Identities = 67/181 (37%), Positives = 112/181 (61%)
Frame = +1
Query: 37 YYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEG 216
++++ G+YVPR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G
Sbjct: 50 FFSDTGNGRYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVG 109
Query: 217 AELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSV 396
EL+D+ LD +R+ +++C LQGF ++ +Y + +S+
Sbjct: 110 KELIDTTLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSI 169
Query: 397 VPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDXEALYDICFRTLKLSTPTYGDLNHLV 576
P+P+VS VVEPYN+ L+ H +E++D + +D EA+YDIC R L + P+Y +LN ++
Sbjct: 170 YPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICKRNLDVDRPSYTNLNRII 229
Query: 577 S 579
S
Sbjct: 230 S 230
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 159 bits (387), Expect = 1e-39
Identities = 66/185 (35%), Positives = 113/185 (61%)
Frame = +1
Query: 22 ERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG 201
+ + +++E G++VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A+G
Sbjct: 47 DSFSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARG 106
Query: 202 HYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 381
HYT G E++D LD +R+ +++C LQGF ++ +Y +
Sbjct: 107 HYTIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAK 166
Query: 382 NTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDXEALYDICFRTLKLSTPTYGD 561
+S+ P+P+VS VVEPYN+ L+ H +E++D ++ +D EA+YDIC R L + P+Y +
Sbjct: 167 LEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERPSYTN 226
Query: 562 LNHLV 576
LN L+
Sbjct: 227 LNRLI 231
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 159 bits (387), Expect = 1e-39
Identities = 66/185 (35%), Positives = 113/185 (61%)
Frame = +1
Query: 22 ERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG 201
+ + +++E G++VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A+G
Sbjct: 46 DSFSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARG 105
Query: 202 HYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 381
HYT G E++D LD +R+ +++C LQGF ++ +Y +
Sbjct: 106 HYTIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAK 165
Query: 382 NTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDXEALYDICFRTLKLSTPTYGD 561
+S+ P+P+VS VVEPYN+ L+ H +E++D ++ +D EA+YDIC R L + P+Y +
Sbjct: 166 LEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERPSYTN 225
Query: 562 LNHLV 576
LN L+
Sbjct: 226 LNRLI 230
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 159 bits (387), Expect = 1e-39
Identities = 66/185 (35%), Positives = 113/185 (61%)
Frame = +1
Query: 22 ERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG 201
+ + +++E G++VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A+G
Sbjct: 47 DSFSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARG 106
Query: 202 HYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 381
HYT G E++D LD +R+ +++C LQGF ++ +Y +
Sbjct: 107 HYTIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAK 166
Query: 382 NTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDXEALYDICFRTLKLSTPTYGD 561
+S+ P+P+VS VVEPYN+ L+ H +E++D ++ +D EA+YDIC R L + P+Y +
Sbjct: 167 LEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERPSYTN 226
Query: 562 LNHLV 576
LN L+
Sbjct: 227 LNRLI 231
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 159 bits (387), Expect = 1e-39
Identities = 66/185 (35%), Positives = 113/185 (61%)
Frame = +1
Query: 22 ERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG 201
+ + +++E G++VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A+G
Sbjct: 47 DSFSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARG 106
Query: 202 HYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 381
HYT G E++D LD +R+ +++C LQGF ++ +Y +
Sbjct: 107 HYTIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAK 166
Query: 382 NTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDXEALYDICFRTLKLSTPTYGD 561
+S+ P+P+VS VVEPYN+ L+ H +E++D ++ +D EA+YDIC R L + P+Y +
Sbjct: 167 LEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERPSYTN 226
Query: 562 LNHLV 576
LN L+
Sbjct: 227 LNRLI 231
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 155 bits (377), Expect = 2e-38
Identities = 69/183 (37%), Positives = 112/183 (61%)
Frame = +1
Query: 31 NVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 210
N +++E GK+VPRAI VDLEP +D VR+G + ++F P+ + G+ A NN+A+GHYT
Sbjct: 50 NTFFSETPSGKHVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYT 109
Query: 211 EGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTY 390
G EL+D V+D VR+ +E C LQGF ++ +Y + +
Sbjct: 110 IGKELIDVVMDRVRRLTERCQSLQGFLIFHSFGGGTGSGFTSLVMERLSIDYGKKAKLEF 169
Query: 391 SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDXEALYDICFRTLKLSTPTYGDLNH 570
S+ P+P++S ++VEPYN+ L+ H +E++D ++ +D EA+Y+I L + +PTY LN
Sbjct: 170 SIYPAPQISTSMVEPYNSLLTTHTTLEHSDCSFIMDNEAIYEITKVNLGVRSPTYTHLNR 229
Query: 571 LVS 579
L++
Sbjct: 230 LLA 232
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 124 bits (300), Expect = 3e-29
Identities = 63/190 (33%), Positives = 101/190 (53%), Gaps = 4/190 (2%)
Frame = +1
Query: 22 ERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNW 192
++ ++ + +A YVPRA+LVDLEP ++ + P F +F DN GAGNNW
Sbjct: 47 DKKDLLFYQADDDHYVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNW 106
Query: 193 AKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPD 372
A G Y +G E+ + ++D++ +E+E+ + L G ++RE +P
Sbjct: 107 ASG-YCQGQEVQEKIMDIIIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPK 165
Query: 373 RIMNTYSVVPSPKVS-DTVVEPYNATLSVHQLVENTDETYCIDXEALYDICFRTLKLSTP 549
+++ TYSV + S D VV PYN LS+ +L+EN D +D AL+ + K TP
Sbjct: 166 KVIQTYSVFANSDTSTDVVVHPYNWVLSMQRLIENPDHVVVLDNAALHRLAAGKFKTDTP 225
Query: 550 TYGDLNHLVS 579
T+ +N LV+
Sbjct: 226 TFDHINSLVA 235
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 124 bits (300), Expect = 3e-29
Identities = 63/190 (33%), Positives = 101/190 (53%), Gaps = 4/190 (2%)
Frame = +1
Query: 22 ERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNW 192
++ ++ + +A YVPRA+LVDLEP ++ + P F +F DN GAGNNW
Sbjct: 47 DKKDLLFYQADDDHYVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNW 106
Query: 193 AKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPD 372
A G Y +G E+ + ++D++ +E+E+ + L G ++RE +P
Sbjct: 107 ASG-YCQGQEVQEKIMDIIIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPK 165
Query: 373 RIMNTYSVVPSPKVS-DTVVEPYNATLSVHQLVENTDETYCIDXEALYDICFRTLKLSTP 549
+++ TYSV + S D VV PYN LS+ +L+EN D +D AL+ + K TP
Sbjct: 166 KVIQTYSVFANSDTSTDVVVHPYNWVLSMQRLIENPDHVVVLDNAALHRLAAGKFKTDTP 225
Query: 550 TYGDLNHLVS 579
T+ +N LV+
Sbjct: 226 TFDHINSLVA 235
>Z68121-1|CAA92204.2| 174|Caenorhabditis elegans Hypothetical
protein T24D3.1 protein.
Length = 174
Score = 30.3 bits (65), Expect = 1.0
Identities = 20/66 (30%), Positives = 32/66 (48%)
Frame = +2
Query: 284 DSNSHTLSEAVPAPVWAHYLSQRSVKSTPTES*THTQSSPRPKYQTPSSNPTMRLSQCTN 463
DS+S +S +P +H+ + + T T TQSS TPS++ + QC+N
Sbjct: 62 DSSSLNISSTTGSPNSSHFTTFTHFSTPSTSPSTSTQSS-----TTPSNSDNKKSFQCSN 116
Query: 464 S*KTQT 481
T+T
Sbjct: 117 CSVTET 122
>AF302237-1|AAG21385.1| 174|Caenorhabditis elegans GATA-type
transcription factor protein.
Length = 174
Score = 30.3 bits (65), Expect = 1.0
Identities = 20/66 (30%), Positives = 32/66 (48%)
Frame = +2
Query: 284 DSNSHTLSEAVPAPVWAHYLSQRSVKSTPTES*THTQSSPRPKYQTPSSNPTMRLSQCTN 463
DS+S +S +P +H+ + + T T TQSS TPS++ + QC+N
Sbjct: 62 DSSSLNISSTTGSPNSSHFTTFTHFSTPSTSPSTSTQSS-----TTPSNSDNKKSFQCSN 116
Query: 464 S*KTQT 481
T+T
Sbjct: 117 CSVTET 122
>AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal element
on autosome protein2 protein.
Length = 1758
Score = 30.3 bits (65), Expect = 1.0
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 335 HYLSQRSVKSTPTES*THTQSSPRPKYQTPSSN 433
H+ +Q+ ST T+ H Q P P+Y PSS+
Sbjct: 96 HHQNQQHQASTSTQQFHHPQRPPPPQYDQPSSS 128
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 29.9 bits (64), Expect = 1.4
Identities = 27/120 (22%), Positives = 48/120 (40%)
Frame = +2
Query: 155 TLFSDSPAPVTTGPRDTTQRALS*STQFLT*SEKNPNHVIVYKDSNSHTLSEAVPAPVWA 334
T + +P TT P TT + +T T + P + + T + A
Sbjct: 190 TTTTTAPTTTTTTPTTTTTTPTT-TTTVPTTTTTTPTTTTTTTTTPTTTTTTPTTTTTPA 248
Query: 335 HYLSQRSVKSTPTES*THTQSSPRPKYQTPSSNPTMRLSQCTNS*KTQTKHTVSXTRHST 514
S+ + +TPT + T T + P TP++ PT + T + +T + + T +T
Sbjct: 249 TTTSETTT-TTPTTT-TQTTTKPTTTTTTPTTTPTTTTTPTTTTTTAKTTKSTTTTTKTT 306
Score = 29.5 bits (63), Expect = 1.8
Identities = 27/124 (21%), Positives = 45/124 (36%)
Frame = +2
Query: 143 SALTTLFSDSPAPVTTGPRDTTQRALS*STQFLT*SEKNPNHVIVYKDSNSHTLSEAVPA 322
S TT +P TT P TT + +T T +E ++ + +
Sbjct: 71 STTTTTTPTTPTTTTTTPTTTTTTPTTTTTTPTTTTETTTTPTT---ETTTTPTTTTPTT 127
Query: 323 PVWAHYLSQRSVKSTPTES*THTQSSPRPKYQTPSSNPTMRLSQCTNS*KTQTKHTVSXT 502
+ +TPT + T T ++P TP++ T + T T T T + T
Sbjct: 128 TTTTPTTTTTETTTTPTTTTTETTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTT 187
Query: 503 RHST 514
+T
Sbjct: 188 TPTT 191
>U28943-17|AAK68292.2| 811|Caenorhabditis elegans Clc-type
chloride channel protein3, isoform b protein.
Length = 811
Score = 28.3 bits (60), Expect = 4.2
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = -2
Query: 222 LSALCVVSLGPVVTGAGLSENK-----VVRAEYLSERSRTNRVHGAGLEV 88
LSA+C + P G+G+ E K V+ EYLS R+ +++ G L +
Sbjct: 180 LSAVCAHYIAPQAIGSGIPEMKTILRGVILKEYLSVRTLLSKMIGLTLSL 229
>U28943-16|AAK68291.1| 1001|Caenorhabditis elegans Clc-type
chloride channel protein3, isoform a protein.
Length = 1001
Score = 28.3 bits (60), Expect = 4.2
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = -2
Query: 222 LSALCVVSLGPVVTGAGLSENK-----VVRAEYLSERSRTNRVHGAGLEV 88
LSA+C + P G+G+ E K V+ EYLS R+ +++ G L +
Sbjct: 109 LSAVCAHYIAPQAIGSGIPEMKTILRGVILKEYLSVRTLLSKMIGLTLSL 158
>AF319614-1|AAG49524.1| 1001|Caenorhabditis elegans CLC-type
chloride channel CLH-3b protein.
Length = 1001
Score = 28.3 bits (60), Expect = 4.2
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = -2
Query: 222 LSALCVVSLGPVVTGAGLSENK-----VVRAEYLSERSRTNRVHGAGLEV 88
LSA+C + P G+G+ E K V+ EYLS R+ +++ G L +
Sbjct: 109 LSAVCAHYIAPQAIGSGIPEMKTILRGVILKEYLSVRTLLSKMIGLTLSL 158
>AF173172-1|AAF13165.1| 811|Caenorhabditis elegans CLC chloride
channel protein protein.
Length = 811
Score = 28.3 bits (60), Expect = 4.2
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = -2
Query: 222 LSALCVVSLGPVVTGAGLSENK-----VVRAEYLSERSRTNRVHGAGLEV 88
LSA+C + P G+G+ E K V+ EYLS R+ +++ G L +
Sbjct: 180 LSAVCAHYIAPQAIGSGIPEMKTILRGVILKEYLSVRTLLSKMIGLTLSL 229
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 27.9 bits (59), Expect = 5.6
Identities = 15/64 (23%), Positives = 31/64 (48%)
Frame = +2
Query: 362 STPTES*THTQSSPRPKYQTPSSNPTMRLSQCTNS*KTQTKHTVSXTRHSTIFASARSNY 541
+TPT + T T ++P+P T +S T + + + T + T + T + + ++ +
Sbjct: 606 TTPTSTTTTTTTTPKPTTSTSTSTSTTTTTTTSTTATTTPQPTTTTTSEKPVTLTTQT-W 664
Query: 542 LHPP 553
PP
Sbjct: 665 TAPP 668
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 27.9 bits (59), Expect = 5.6
Identities = 15/64 (23%), Positives = 31/64 (48%)
Frame = +2
Query: 362 STPTES*THTQSSPRPKYQTPSSNPTMRLSQCTNS*KTQTKHTVSXTRHSTIFASARSNY 541
+TPT + T T ++P+P T +S T + + + T + T + T + + ++ +
Sbjct: 606 TTPTSTTTTTTTTPKPTTSTSTSTSTTTTTTTSTTATTTPQPTTTTTSEKPVTLTTQT-W 664
Query: 542 LHPP 553
PP
Sbjct: 665 TAPP 668
>U00044-5|AAK93857.1| 174|Caenorhabditis elegans Mesoderm and
endoderm determinationprotein 2 protein.
Length = 174
Score = 27.9 bits (59), Expect = 5.6
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +2
Query: 284 DSNSHTLSEAVPAPVWAHYLSQRSVKSTPTES*THTQSSPRPKYQTPSSNPTMRLS-QCT 460
DS+S +S +P +H+ + + T T TQSS TP SN + S QC+
Sbjct: 62 DSSSLNISPTTGSPNSSHFTTFTHFSTPSTSPSTSTQSS------TPPSNSDNKKSFQCS 115
Query: 461 NS*KTQT 481
N T+T
Sbjct: 116 NCSVTET 122
>AF302238-1|AAG21386.1| 174|Caenorhabditis elegans GATA-type
transcription factor protein.
Length = 174
Score = 27.9 bits (59), Expect = 5.6
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +2
Query: 284 DSNSHTLSEAVPAPVWAHYLSQRSVKSTPTES*THTQSSPRPKYQTPSSNPTMRLS-QCT 460
DS+S +S +P +H+ + + T T TQSS TP SN + S QC+
Sbjct: 62 DSSSLNISPTTGSPNSSHFTTFTHFSTPSTSPSTSTQSS------TPPSNSDNKKSFQCS 115
Query: 461 NS*KTQT 481
N T+T
Sbjct: 116 NCSVTET 122
>Z69634-4|CAA93455.2| 674|Caenorhabditis elegans Hypothetical
protein B0001.6 protein.
Length = 674
Score = 27.5 bits (58), Expect = 7.4
Identities = 13/49 (26%), Positives = 21/49 (42%)
Frame = +2
Query: 290 NSHTLSEAVPAPVWAHYLSQRSVKSTPTES*THTQSSPRPKYQTPSSNP 436
NSH + VP P+ R+ + P + SS + + P+S P
Sbjct: 370 NSHLRVDPVPVPIEPSIQQNRTTTTAPISAPARRISSNESRRENPNSQP 418
>Z46787-6|CAA86744.1| 392|Caenorhabditis elegans Hypothetical
protein C16C10.6 protein.
Length = 392
Score = 27.1 bits (57), Expect = 9.7
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +2
Query: 320 APVWAHYLSQRSVKSTPTES*THTQSSPRPKYQTPSSNPTMRLS 451
A A + QR+ TP S +PR + +T S +PT R S
Sbjct: 271 ATTHAERIRQRNYTPTPPSSDDEGARAPRARRRTSSPSPTSRKS 314
>AC024776-1|AAK68468.1| 338|Caenorhabditis elegans Hypothetical
protein Y41D4B.18 protein.
Length = 338
Score = 27.1 bits (57), Expect = 9.7
Identities = 21/62 (33%), Positives = 28/62 (45%)
Frame = +2
Query: 362 STPTES*THTQSSPRPKYQTPSSNPTMRLSQCTNS*KTQTKHTVSXTRHSTIFASARSNY 541
S P S T + SSP P +S PT SQ T S +T + T ++I S +
Sbjct: 275 SQPVSSSTSSTSSPAPTNPPTTSRPT-TASQSTASQNVETTTKLGLT--ASITVSIMTTL 331
Query: 542 LH 547
LH
Sbjct: 332 LH 333
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.316 0.136 0.405
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,521,730
Number of Sequences: 27780
Number of extensions: 259393
Number of successful extensions: 977
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 947
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1215936170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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