Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_N06
(583 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 332 1e-91
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 330 5e-91
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 329 9e-91
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 329 9e-91
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 326 9e-90
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 325 1e-89
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 325 1e-89
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 325 1e-89
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 324 2e-89
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 173 5e-44
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 173 5e-44
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 173 5e-44
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 173 5e-44
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 172 1e-43
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 172 1e-43
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 169 2e-42
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 120 5e-28
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 120 9e-28
At5g20860.1 68418.m02477 pectinesterase family protein contains ... 32 0.32
At2g31580.1 68415.m03858 expressed protein contains Pfam profi... 32 0.32
At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5 ... 31 0.42
At1g23720.1 68414.m02994 proline-rich extensin-like family prote... 29 2.3
At1g53300.1 68414.m06041 thioredoxin family protein contains Pfa... 28 4.0
At1g17210.1 68414.m02097 expressed protein distantly related to ... 28 4.0
At2g40290.2 68415.m04961 eukaryotic translation initiation facto... 28 5.2
At2g40290.1 68415.m04960 eukaryotic translation initiation facto... 28 5.2
At4g00220.1 68417.m00023 LOB domain protein 30 / lateral organ b... 27 9.1
At3g18110.1 68416.m02303 pentatricopeptide (PPR) repeat-containi... 27 9.1
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 332 bits (816), Expect = 1e-91
Identities = 152/193 (78%), Positives = 166/193 (86%)
Frame = +1
Query: 1 GDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGA 180
GD+DLQLERINVY+NEASGGKYVPRA+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGA
Sbjct: 38 GDTDLQLERINVYFNEASGGKYVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGA 97
Query: 181 GNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIRE 360
GNNWAKGHYTEGAEL+DSVLDVVRKE+E+CDCLQGFQ KIRE
Sbjct: 98 GNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIRE 157
Query: 361 EYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDXEALYDICFRTLKL 540
EYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +D EALYDICFRTLKL
Sbjct: 158 EYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL 217
Query: 541 STPTYGDLNHLVS 579
+ PT+GDLNHL+S
Sbjct: 218 ANPTFGDLNHLIS 230
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 330 bits (810), Expect = 5e-91
Identities = 151/193 (78%), Positives = 166/193 (86%)
Frame = +1
Query: 1 GDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGA 180
GDS+LQLER+NVYYNEAS G+YVPRA+L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGA
Sbjct: 38 GDSELQLERVNVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGA 97
Query: 181 GNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIRE 360
GNNWAKGHYTEGAEL+DSVLDVVRKE+E+CDCLQGFQ KIRE
Sbjct: 98 GNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIRE 157
Query: 361 EYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDXEALYDICFRTLKL 540
EYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +D EALYDICFRTLKL
Sbjct: 158 EYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL 217
Query: 541 STPTYGDLNHLVS 579
STP++GDLNHL+S
Sbjct: 218 STPSFGDLNHLIS 230
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 329 bits (808), Expect = 9e-91
Identities = 152/194 (78%), Positives = 167/194 (86%), Gaps = 1/194 (0%)
Frame = +1
Query: 1 GDS-DLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSG 177
GDS DLQLERINVYYNEASGG+YVPRA+L+DLEPGTMDS+RSGP+GQIFRPDNFVFGQSG
Sbjct: 38 GDSADLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSG 97
Query: 178 AGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIR 357
AGNNWAKGHYTEGAEL+D+VLDVVRKE+E+CDCLQGFQ KIR
Sbjct: 98 AGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIR 157
Query: 358 EEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDXEALYDICFRTLK 537
EEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +D EALYDICFRTLK
Sbjct: 158 EEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLK 217
Query: 538 LSTPTYGDLNHLVS 579
LSTP++GDLNHL+S
Sbjct: 218 LSTPSFGDLNHLIS 231
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 329 bits (808), Expect = 9e-91
Identities = 152/194 (78%), Positives = 167/194 (86%), Gaps = 1/194 (0%)
Frame = +1
Query: 1 GDS-DLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSG 177
GD+ DLQLERINVYYNEASGG+YVPRA+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSG
Sbjct: 38 GDTADLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSG 97
Query: 178 AGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIR 357
AGNNWAKGHYTEGAEL+D+VLDVVRKE+E+CDCLQGFQ KIR
Sbjct: 98 AGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIR 157
Query: 358 EEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDXEALYDICFRTLK 537
EEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +D EALYDICFRTLK
Sbjct: 158 EEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLK 217
Query: 538 LSTPTYGDLNHLVS 579
LSTP++GDLNHL+S
Sbjct: 218 LSTPSFGDLNHLIS 231
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 326 bits (800), Expect = 9e-90
Identities = 149/193 (77%), Positives = 166/193 (86%)
Frame = +1
Query: 1 GDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGA 180
G+SDLQLER+NVYYNEAS G+YVPRAIL+DLEPGTMDSVR+GP+GQIFRPDNFVFGQSGA
Sbjct: 38 GNSDLQLERVNVYYNEASCGRYVPRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGA 97
Query: 181 GNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIRE 360
GNNWAKGHYTEGAEL+D+VLDVVRKE+E+CDCLQGFQ KIRE
Sbjct: 98 GNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIRE 157
Query: 361 EYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDXEALYDICFRTLKL 540
EYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +D EALYDICFRTLKL
Sbjct: 158 EYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL 217
Query: 541 STPTYGDLNHLVS 579
+TP++GDLNHL+S
Sbjct: 218 TTPSFGDLNHLIS 230
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 325 bits (799), Expect = 1e-89
Identities = 149/193 (77%), Positives = 165/193 (85%)
Frame = +1
Query: 1 GDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGA 180
GDSDLQLERINVYYNEAS G++VPRA+L+DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGA
Sbjct: 38 GDSDLQLERINVYYNEASCGRFVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGA 97
Query: 181 GNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIRE 360
GNNWAKGHYTEGAEL+DSVLDVVRKE+E+CDCLQGFQ KIRE
Sbjct: 98 GNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIRE 157
Query: 361 EYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDXEALYDICFRTLKL 540
EYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +D EALYDICFRTLKL
Sbjct: 158 EYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL 217
Query: 541 STPTYGDLNHLVS 579
+TP++GDLNHL+S
Sbjct: 218 TTPSFGDLNHLIS 230
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 325 bits (799), Expect = 1e-89
Identities = 149/193 (77%), Positives = 165/193 (85%)
Frame = +1
Query: 1 GDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGA 180
GDSDLQLERINVYYNEAS G++VPRA+L+DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGA
Sbjct: 38 GDSDLQLERINVYYNEASCGRFVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGA 97
Query: 181 GNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIRE 360
GNNWAKGHYTEGAEL+DSVLDVVRKE+E+CDCLQGFQ KIRE
Sbjct: 98 GNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIRE 157
Query: 361 EYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDXEALYDICFRTLKL 540
EYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +D EALYDICFRTLKL
Sbjct: 158 EYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL 217
Query: 541 STPTYGDLNHLVS 579
+TP++GDLNHL+S
Sbjct: 218 TTPSFGDLNHLIS 230
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 325 bits (799), Expect = 1e-89
Identities = 148/193 (76%), Positives = 166/193 (86%)
Frame = +1
Query: 1 GDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGA 180
G++DLQLER+NVYYNEAS G++VPRA+L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGA
Sbjct: 38 GENDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGA 97
Query: 181 GNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIRE 360
GNNWAKGHYTEGAEL+DSVLDVVRKE+E+CDCLQGFQ KIRE
Sbjct: 98 GNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIRE 157
Query: 361 EYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDXEALYDICFRTLKL 540
EYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +D EALYDICFRTLKL
Sbjct: 158 EYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL 217
Query: 541 STPTYGDLNHLVS 579
+TP++GDLNHL+S
Sbjct: 218 TTPSFGDLNHLIS 230
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 324 bits (797), Expect = 2e-89
Identities = 150/193 (77%), Positives = 164/193 (84%)
Frame = +1
Query: 1 GDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGA 180
GDS LQLERI+VY+NEASGGKYVPRA+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGA
Sbjct: 38 GDSPLQLERIDVYFNEASGGKYVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGA 97
Query: 181 GNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIRE 360
GNNWAKGHYTEGAEL+DSVLDVVRKE+E+ DCLQGFQ KIRE
Sbjct: 98 GNNWAKGHYTEGAELIDSVLDVVRKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIRE 157
Query: 361 EYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDXEALYDICFRTLKL 540
EYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +D EALYDICFRTLKL
Sbjct: 158 EYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL 217
Query: 541 STPTYGDLNHLVS 579
+ PT+GDLNHL+S
Sbjct: 218 ANPTFGDLNHLIS 230
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 173 bits (422), Expect = 5e-44
Identities = 79/186 (42%), Positives = 116/186 (62%)
Frame = +1
Query: 22 ERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG 201
+ N +++E GK+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+G
Sbjct: 47 DAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARG 106
Query: 202 HYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 381
HYT G E+VD LD +RK +++C LQGF ++ +Y +
Sbjct: 107 HYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSK 166
Query: 382 NTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDXEALYDICFRTLKLSTPTYGD 561
++V PSP+VS +VVEPYN+ LS H L+E+TD + +D EA+YDIC R+L + PTY +
Sbjct: 167 LGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLNIERPTYTN 226
Query: 562 LNHLVS 579
LN LVS
Sbjct: 227 LNRLVS 232
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 173 bits (422), Expect = 5e-44
Identities = 79/186 (42%), Positives = 116/186 (62%)
Frame = +1
Query: 22 ERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG 201
+ N +++E GK+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+G
Sbjct: 47 DAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARG 106
Query: 202 HYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 381
HYT G E+VD LD +RK +++C LQGF ++ +Y +
Sbjct: 107 HYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSK 166
Query: 382 NTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDXEALYDICFRTLKLSTPTYGD 561
++V PSP+VS +VVEPYN+ LS H L+E+TD + +D EA+YDIC R+L + PTY +
Sbjct: 167 LGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLNIERPTYTN 226
Query: 562 LNHLVS 579
LN LVS
Sbjct: 227 LNRLVS 232
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 173 bits (422), Expect = 5e-44
Identities = 79/186 (42%), Positives = 116/186 (62%)
Frame = +1
Query: 22 ERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG 201
+ N +++E GK+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+G
Sbjct: 47 DAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARG 106
Query: 202 HYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 381
HYT G E+VD LD +RK +++C LQGF ++ +Y +
Sbjct: 107 HYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSK 166
Query: 382 NTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDXEALYDICFRTLKLSTPTYGD 561
++V PSP+VS +VVEPYN+ LS H L+E+TD + +D EA+YDIC R+L + PTY +
Sbjct: 167 LGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLSIERPTYTN 226
Query: 562 LNHLVS 579
LN LVS
Sbjct: 227 LNRLVS 232
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 173 bits (422), Expect = 5e-44
Identities = 79/186 (42%), Positives = 116/186 (62%)
Frame = +1
Query: 22 ERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG 201
+ N +++E GK+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+G
Sbjct: 47 DAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARG 106
Query: 202 HYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 381
HYT G E+VD LD +RK +++C LQGF ++ +Y +
Sbjct: 107 HYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSK 166
Query: 382 NTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDXEALYDICFRTLKLSTPTYGD 561
++V PSP+VS +VVEPYN+ LS H L+E+TD + +D EA+YDIC R+L + PTY +
Sbjct: 167 LGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLSIERPTYTN 226
Query: 562 LNHLVS 579
LN LVS
Sbjct: 227 LNRLVS 232
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 172 bits (419), Expect = 1e-43
Identities = 78/186 (41%), Positives = 114/186 (61%)
Frame = +1
Query: 22 ERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG 201
+ N +++E GK+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+G
Sbjct: 47 DAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARG 106
Query: 202 HYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 381
HYT G E+VD LD VRK +++C LQGF ++ +Y +
Sbjct: 107 HYTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSK 166
Query: 382 NTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDXEALYDICFRTLKLSTPTYGD 561
+++ PSP+VS VVEPYN+ LS H L+E+TD +D EA+YDIC R+L + PTY +
Sbjct: 167 LGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTN 226
Query: 562 LNHLVS 579
LN L+S
Sbjct: 227 LNRLIS 232
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 172 bits (419), Expect = 1e-43
Identities = 78/186 (41%), Positives = 114/186 (61%)
Frame = +1
Query: 22 ERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG 201
+ N +++E GK+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+G
Sbjct: 47 DAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARG 106
Query: 202 HYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 381
HYT G E+VD LD VRK +++C LQGF ++ +Y +
Sbjct: 107 HYTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSK 166
Query: 382 NTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDXEALYDICFRTLKLSTPTYGD 561
+++ PSP+VS VVEPYN+ LS H L+E+TD +D EA+YDIC R+L + PTY +
Sbjct: 167 LGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTN 226
Query: 562 LNHLVS 579
LN L+S
Sbjct: 227 LNRLIS 232
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 169 bits (410), Expect = 2e-42
Identities = 74/186 (39%), Positives = 116/186 (62%)
Frame = +1
Query: 22 ERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG 201
+ N +++E S G++VPRA+ +DLEP +D VR+G + Q+F P+ + G+ A NN+A+G
Sbjct: 47 DAFNTFFSETSSGQHVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARG 106
Query: 202 HYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 381
HYT G E+VD+ L+ +RK +++C LQGF ++ ++ +
Sbjct: 107 HYTVGREIVDTCLERLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDFGKKSK 166
Query: 382 NTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDXEALYDICFRTLKLSTPTYGD 561
+++ PSP+VS VVEPYN+ LS H L+E+TD +D EA+YDIC R+L + PTY +
Sbjct: 167 LGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDICRRSLDIERPTYSN 226
Query: 562 LNHLVS 579
LN L+S
Sbjct: 227 LNRLIS 232
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 120 bits (290), Expect = 5e-28
Identities = 59/189 (31%), Positives = 102/189 (53%), Gaps = 3/189 (1%)
Frame = +1
Query: 22 ERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWA 195
+R +V++ +A Y+PRA+L+DLEP ++ +++G + ++ +N GAGNNWA
Sbjct: 46 DRKDVFFYQADDQHYIPRALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWA 105
Query: 196 KGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDR 375
G Y +G + + ++D++ +E++ D L+GF + + Y +
Sbjct: 106 SG-YHQGKGVEEEIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKK 164
Query: 376 IMNTYSVVPSP-KVSDTVVEPYNATLSVHQLVENTDETYCIDXEALYDICFRTLKLSTPT 552
++ TYSV P+ + SD VV+PYN+ L++ +L N D +D AL I L L+ PT
Sbjct: 165 LVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLTNPT 224
Query: 553 YGDLNHLVS 579
+ N LVS
Sbjct: 225 FAQTNSLVS 233
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 120 bits (288), Expect = 9e-28
Identities = 59/189 (31%), Positives = 102/189 (53%), Gaps = 3/189 (1%)
Frame = +1
Query: 22 ERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWA 195
+R +V++ +A Y+PRA+L+DLEP ++ +++G + ++ +N GAGNNWA
Sbjct: 46 DRKDVFFYQADDQHYIPRALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWA 105
Query: 196 KGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDR 375
G Y +G + + ++D++ +E++ D L+GF + + Y +
Sbjct: 106 SG-YHQGKGVEEEIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKK 164
Query: 376 IMNTYSVVPSP-KVSDTVVEPYNATLSVHQLVENTDETYCIDXEALYDICFRTLKLSTPT 552
++ TYSV P+ + SD VV+PYN+ L++ +L N D +D AL I L L+ PT
Sbjct: 165 LVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALGRIAVERLHLTNPT 224
Query: 553 YGDLNHLVS 579
+ N LVS
Sbjct: 225 FAQTNSLVS 233
>At5g20860.1 68418.m02477 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 512
Score = 31.9 bits (69), Expect = 0.32
Identities = 13/44 (29%), Positives = 26/44 (59%)
Frame = +1
Query: 415 SDTVVEPYNATLSVHQLVENTDETYCIDXEALYDICFRTLKLST 546
S+ ++ P ++++ +LV D TY + ++ D C R +K+ST
Sbjct: 77 SNLLIPPLSSSMGSSKLVSLEDSTYTLPSPSVSDSCERLMKMST 120
>At2g31580.1 68415.m03858 expressed protein contains Pfam profile:
PF04446 family of unknown function (DUF549)
Length = 567
Score = 31.9 bits (69), Expect = 0.32
Identities = 22/71 (30%), Positives = 32/71 (45%)
Frame = +1
Query: 223 LVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVP 402
+++SV VVRKE+E+C+CLQ F RE D + Y V
Sbjct: 1 MINSV-GVVRKEAENCNCLQVF--FVSGSFKVDSVEAKKKEENFRETLRDMANSKYEYVK 57
Query: 403 SPKVSDTVVEP 435
S ++ D V+ P
Sbjct: 58 SFELEDEVMLP 68
>At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to pre-mRNA splicing
factor PRP17 (SP:O60508) [Homo sapiens]
Length = 457
Score = 31.5 bits (68), Expect = 0.42
Identities = 27/95 (28%), Positives = 44/95 (46%)
Frame = +2
Query: 287 SNSHTLSEAVPAPVWAHYLSQRSVKSTPTES*THTQSSPRPKYQTPSSNPTMRLSQCTNS 466
S+S ++ VP PV Y+S+R + S T Q P S+PT+ L ++S
Sbjct: 67 SSSFSIPVPVPVPVPGRYVSKRERSLLASLSTIPTPDQSSDLSQKPYSSPTV-LGSISDS 125
Query: 467 *KTQTKHTVSXTRHSTIFASARSNYLHPPMEISIT 571
+H +S RH +S ++ + M IS+T
Sbjct: 126 --DVPRHVLSSVRHRPKGSSLQTE-MPSRMSISLT 157
>At1g23720.1 68414.m02994 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 895
Score = 29.1 bits (62), Expect = 2.3
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +2
Query: 257 NPNHVIVYKDS-NSHTLSEAVPAPVWAHYLSQRSVKSTPTES*THTQSSPRPKYQTPSSN 433
+P+ ++YK + H P P ++H + KS PT H S P P Y +PS
Sbjct: 522 SPSPKVIYKSPPHPHVCVCPPPPPCYSHS-PKIEYKSPPTPYVYH--SPPPPPYYSPSPK 578
Query: 434 PTMRLS 451
P + S
Sbjct: 579 PAYKSS 584
Score = 27.1 bits (57), Expect = 9.1
Identities = 17/63 (26%), Positives = 30/63 (47%)
Frame = +2
Query: 257 NPNHVIVYKDSNSHTLSEAVPAPVWAHYLSQRSVKSTPTES*THTQSSPRPKYQTPSSNP 436
+P+ + YK S + + P P ++ S + V +P + SSP P Y +PS P
Sbjct: 447 SPSPKLTYKSSPPPYVYSSPPPPYYSP--SPKVVYKSPPPP--YVYSSPPPPYYSPSPKP 502
Query: 437 TMR 445
+ +
Sbjct: 503 SYK 505
>At1g53300.1 68414.m06041 thioredoxin family protein contains Pfam
profiles PF00085: Thioredoxin, PF00515: TPR Domain;
similar to tetratricopeptide repeat protein 2
(GI:7248701) [Drosophila melanogaster]; similar to DnaJ
homolog subfamily C member 7 (Tetratricopeptide repeat
protein 2) (TPR repeat protein 2) (Swiss-Prot:Q99615)
[Homo sapiens]
Length = 699
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = -3
Query: 182 PAPDCPKTKLSGRNICPKGPERTESMVPG-SRSTRMARGT 66
PAP P L NICP G + M SRS + GT
Sbjct: 129 PAPTSPANVLPTGNICPSGKIQITGMTQSRSRSDVLGSGT 168
>At1g17210.1 68414.m02097 expressed protein distantly related to
dentin phosphoryn [Homo sapiens] (GI:4322670)
Length = 958
Score = 28.3 bits (60), Expect = 4.0
Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 11/52 (21%)
Frame = -3
Query: 173 DCPK-TKLSGRNICPKGPERTESMV--PG------SRSTRMARGTY--LPPE 51
DC + + S RN CP GP R +S + PG S S+R A G Y L PE
Sbjct: 280 DCEEHSAQSARNGCPSGPARNQSRLQDPGPSRKQFSASSRKASGNYEVLGPE 331
>At2g40290.2 68415.m04961 eukaryotic translation initiation factor 2
subunit 1, putative / eIF-2A, putative / eIF-2-alpha,
putative similar to Swiss-Prot:P05198 eukaryotic
translation initiation factor 2 subunit 1 (Eukaryotic
translation initiation factor 2 alpha subunit)
(eIF-2-alpha) (EIF- 2alpha) (EIF-2A) [Homo sapiens]
Length = 241
Score = 27.9 bits (59), Expect = 5.2
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 421 TVVEPYNATLSVHQLVENTDETYCIDXEALY 513
T E YN + VH ++ + ET ID E LY
Sbjct: 101 TCEERYNKSKLVHSIMRHVAETLSIDLEDLY 131
>At2g40290.1 68415.m04960 eukaryotic translation initiation factor 2
subunit 1, putative / eIF-2A, putative / eIF-2-alpha,
putative similar to Swiss-Prot:P05198 eukaryotic
translation initiation factor 2 subunit 1 (Eukaryotic
translation initiation factor 2 alpha subunit)
(eIF-2-alpha) (EIF- 2alpha) (EIF-2A) [Homo sapiens]
Length = 344
Score = 27.9 bits (59), Expect = 5.2
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 421 TVVEPYNATLSVHQLVENTDETYCIDXEALY 513
T E YN + VH ++ + ET ID E LY
Sbjct: 101 TCEERYNKSKLVHSIMRHVAETLSIDLEDLY 131
>At4g00220.1 68417.m00023 LOB domain protein 30 / lateral organ
boundaries domain protein 30 (LBD30) identical to LOB
DOMAIN 30 [Arabidopsis thaliana] GI:16660632; supported
by full-length cDNA gi:16660631
Length = 228
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +1
Query: 502 EALYDICFRT-LKLSTPTYGDLNHLVSL 582
+A+ ICF +L P YG ++H+VSL
Sbjct: 73 DAVVSICFEAQARLRDPIYGCVSHIVSL 100
>At3g18110.1 68416.m02303 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile: PF01535 PPR repeat
Length = 1429
Score = 27.1 bits (57), Expect = 9.1
Identities = 23/74 (31%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Frame = +2
Query: 287 SNSHTLSEAVPAPVWAHYLSQRSVKSTPTES*THTQSSP-RPKYQTPSSNPTMRLSQCTN 463
S T S A PA W H + STP++ T SSP P TP S +
Sbjct: 37 SQKFTYSRASPAVRWPHLNLREIYDSTPSQ----TLSSPVSPIAGTPDSGDVVDSIASRE 92
Query: 464 S*KTQTKHTVSXTR 505
KT+ + V+ R
Sbjct: 93 EQKTKDETAVATRR 106
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.316 0.136 0.405
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,818,706
Number of Sequences: 28952
Number of extensions: 241387
Number of successful extensions: 856
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 842
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1141585696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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