Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_N05
         (475 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    27   0.067
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    27   0.088
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     26   0.20 
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    24   0.62 
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    23   1.9  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    23   1.9  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    23   1.9  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   5.8  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    21   7.7  

>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 27.5 bits (58), Expect = 0.067
 Identities = 20/66 (30%), Positives = 32/66 (48%)
 Frame = +3

Query: 123 PTSDELPVLEPAVMWGALPDSVSLARPQPSETHNVSPAPALQRLLTASTTGPPPQDLVKN 302
           P SD+     P V +G + ++   + P    T N SP     +L TA+   PP  +L  N
Sbjct: 412 PGSDQRSTPSPRV-YGNVNENQDCSTP----TEN-SPTKPYYKLKTANNKRPPSTELGTN 465

Query: 303 IYSNQR 320
           IY++ +
Sbjct: 466 IYTSSK 471


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 27.1 bits (57), Expect = 0.088
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +3

Query: 177 PDSVSLARPQPSETHNVSPAPALQRLLTASTTGPP 281
           P+ V    PQP++T    P  A ++   +STT  P
Sbjct: 393 PEPVPTPEPQPTQTTESEPTQASEQPTESSTTQKP 427


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 25.8 bits (54), Expect = 0.20
 Identities = 17/63 (26%), Positives = 31/63 (49%)
 Frame = +3

Query: 63  DAFDNTKSDNDIDDGNSPFIPTSDELPVLEPAVMWGALPDSVSLARPQPSETHNVSPAPA 242
           D  D+   D D+D+G+ P +P +      + A+ +  L  +V+ A   PS+  ++S    
Sbjct: 235 DPEDDDDKDQDMDEGDLP-LPAAPGGDSQQAALNYSTLASAVASAN-GPSQDPSISSTET 292

Query: 243 LQR 251
           L R
Sbjct: 293 LLR 295


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 24.2 bits (50), Expect = 0.62
 Identities = 12/34 (35%), Positives = 14/34 (41%)
 Frame = +3

Query: 201 PQPSETHNVSPAPALQRLLTASTTGPPPQDLVKN 302
           P+P +          QR  T STT  PP   V N
Sbjct: 431 PKPGQWVPEKSTSTTQRTTTVSTTEAPPAPAVSN 464


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +3

Query: 225 VSPAPALQRLLTASTTGPPPQDLVKNIYSNQ 317
           + P P    L T+++  P   +L++N  SN+
Sbjct: 317 IPPEPISASLSTSNSNSPSSTNLIQNEASNE 347


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +3

Query: 225 VSPAPALQRLLTASTTGPPPQDLVKNIYSNQ 317
           + P P    L T+++  P   +L++N  SN+
Sbjct: 106 IPPEPISASLSTSNSNSPSSTNLIQNEASNE 136


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +3

Query: 225 VSPAPALQRLLTASTTGPPPQDLVKNIYSNQ 317
           + P P    L T+++  P   +L++N  SN+
Sbjct: 106 IPPEPISASLSTSNSNSPSSTNLIQNEASNE 136


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -1

Query: 277 GPVVDAVSRRCKAGAGDTLCVSE 209
           G V++ +  RC     D +CVS+
Sbjct: 450 GVVLNPLDARCNEIRPDAICVSQ 472


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 14/63 (22%), Positives = 23/63 (36%)
 Frame = +3

Query: 168 GALPDSVSLARPQPSETHNVSPAPALQRLLTASTTGPPPQDLVKNIYSNQRVYIDQNASP 347
           GA  D     RP+      +       R+  A  T P  + L +    N+ + +   +SP
Sbjct: 206 GAAVDESRTPRPKHDGRGRIVERFTSDRVHAALVTSPRARPLARTCRDNRLLVLAGTSSP 265

Query: 348 RAR 356
             R
Sbjct: 266 SNR 268


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,125
Number of Sequences: 336
Number of extensions: 2342
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11036865
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)