Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_N05
(475 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0011 + 13703564-13703766,13704685-13705526,13705628-137057... 31 0.36
02_02_0015 + 6109552-6109650,6110006-6110078,6111937-6111998,611... 30 1.1
09_04_0361 - 16948740-16948860,16948951-16949018,16949424-169495... 29 1.4
12_01_0433 - 3402250-3402536,3402644-3403030,3403523-3403957,340... 29 1.9
03_01_0271 + 2097027-2098583 29 2.5
11_06_0326 - 22382001-22383248 28 3.3
06_01_0268 + 1989069-1989293,1989938-1990020,1990136-1990357,199... 28 3.3
06_03_1298 + 29141578-29141623,29142129-29142250,29143818-291438... 28 4.4
05_04_0268 - 19574540-19574582,19574664-19574755,19574843-195749... 28 4.4
01_06_0959 - 33362810-33363125,33363309-33363475,33363583-333644... 28 4.4
01_06_0259 + 27955005-27955436,27955685-27955822 28 4.4
09_06_0176 + 21351884-21352693,21352821-21352976,21353425-213536... 27 5.8
08_01_0535 - 4638954-4639127,4639894-4639944,4640287-4640352,464... 27 5.8
05_06_0059 - 25264704-25266032 27 5.8
04_03_0747 - 19251617-19251781,19252377-19252502,19252606-192527... 27 5.8
03_05_0730 + 27208293-27208813,27209052-27209173,27210429-272104... 27 5.8
01_01_0595 - 4430738-4430785,4430904-4432679 27 5.8
12_02_0320 - 17504511-17505016,17505757-17506147 27 7.7
08_01_0297 + 2399731-2401176 27 7.7
07_01_0279 + 2055310-2055541,2055916-2056235,2056734-2057213 27 7.7
06_01_0855 + 6493239-6494420 27 7.7
05_07_0210 + 28427167-28427589 27 7.7
>09_04_0011 +
13703564-13703766,13704685-13705526,13705628-13705704,
13706294-13706339,13706479-13706722,13710078-13710150,
13711119-13711235
Length = 533
Score = 31.5 bits (68), Expect = 0.36
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 3/96 (3%)
Frame = -1
Query: 283 GGGPVVDAVSRRCKAGAGDTLCVSEGWGRARLTLSGRAPHMTAGSNTGSSSLVGIKG--- 113
G G A + +G GD++C+ G G + + A H + S +SS+ G G
Sbjct: 395 GSGDEEFAGGGQAASGGGDSMCL-RGGGGGGVAAAAFAEHGRSASEGAASSVGGGGGGDM 453
Query: 112 EFPSSISLSDFVLSNASKDNSVNNDDCSHDESFS*G 5
+ S+ + S SN+S+D ++++ C+ D S G
Sbjct: 454 DQSSAGNTSTTRWSNSSRDPWLSSNSCNMDAHRSVG 489
>02_02_0015 +
6109552-6109650,6110006-6110078,6111937-6111998,
6112315-6112376,6112463-6112556,6112673-6113227,
6113379-6113870,6113967-6114137,6115713-6115817,
6115903-6116052,6116372-6116498,6116585-6116648,
6117147-6117203,6117423-6117555,6117660-6117746
Length = 776
Score = 29.9 bits (64), Expect = 1.1
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +3
Query: 201 PQPSETHNVSPAPALQRLLTASTTGPPPQDLVKNIYSNQRVYIDQNASPRARSAV 365
P+P+ T + P P +QR TAS+ G + ++ ID +A P ++V
Sbjct: 300 PRPNGTRTIEPPPQMQRTSTASSIGSSEGTSEQIKVASTISLIDFSADPEPSASV 354
>09_04_0361 -
16948740-16948860,16948951-16949018,16949424-16949510,
16949626-16949694,16949786-16949854,16949944-16950765
Length = 411
Score = 29.5 bits (63), Expect = 1.4
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +3
Query: 114 PFIPTSDELPVLEPAVMWGALPDSVSLARPQPSETHNVSPAPAL 245
PF+ TS LP + A A P S S + P P+ ++ P AL
Sbjct: 151 PFLQTSKWLPCSDLATSSSAPPSSPSPSPPPPAPAPSIRPKKAL 194
>12_01_0433 - 3402250-3402536,3402644-3403030,3403523-3403957,
3404071-3404562,3404718-3404821,3404913-3404994,
3405085-3405441,3405532-3406089,3406376-3406479,
3406575-3406650,3406764-3406898,3407192-3407494,
3407581-3408345,3409459-3412591,3412763-3412882
Length = 2445
Score = 29.1 bits (62), Expect = 1.9
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +3
Query: 63 DAFDNTKSDNDIDDGNSPFIPTSDELPVLEPAVMWGALPDSVSLAR 200
DA + S+N +D+ N D+ PVLEP GA DS+ + +
Sbjct: 1437 DAEEGVHSENGVDESN-----IDDQTPVLEPVEDHGAHVDSILVTK 1477
>03_01_0271 + 2097027-2098583
Length = 518
Score = 28.7 bits (61), Expect = 2.5
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 276 PPPQDLVKNIYSNQRVYIDQNASPR 350
PPP D+V + Y N Y+D++ +PR
Sbjct: 283 PPPADIVSS-YINDPEYVDEDGNPR 306
>11_06_0326 - 22382001-22383248
Length = 415
Score = 28.3 bits (60), Expect = 3.3
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +3
Query: 141 PVLEPAVMWGALPDSVSLARPQPSETHNVSPAPALQR 251
P+L AV+ AL + + +P P+ +++PA + R
Sbjct: 316 PILAAAVLNSALASTTAALKPNPAAASSINPAAVVAR 352
>06_01_0268 +
1989069-1989293,1989938-1990020,1990136-1990357,
1990434-1990621,1990711-1990835,1990988-1991039,
1991585-1991874,1992229-1992307,1992527-1992657
Length = 464
Score = 28.3 bits (60), Expect = 3.3
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +3
Query: 201 PQPSETHNVSPAPALQRLLTASTTGPPPQ 287
PQP+ + S PA + L T PPPQ
Sbjct: 19 PQPAADPSPSAVPASEEALDPQTPAPPPQ 47
>06_03_1298 +
29141578-29141623,29142129-29142250,29143818-29143874,
29143983-29144138,29144220-29144304,29144575-29144665,
29144807-29144971,29145064-29145186,29145334-29145409,
29145513-29145642,29145951-29147824,29148339-29148529,
29148697-29148860,29149164-29149275,29149276-29149294
Length = 1136
Score = 27.9 bits (59), Expect = 4.4
Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 6/83 (7%)
Frame = +3
Query: 108 NSPFIPTSDELPVLEPAVMWGALPDSVSLARPQPSETHNVSPAPALQRLLTAST------ 269
N+ +P S P+ P+ + A+ + + + P HNV + +L A T
Sbjct: 757 NTEKVPQS-AAPMSVPSSL-EAVTATPRMMKDSPKLNHNVKQSVVASKLANAGTGSQNYV 814
Query: 270 TGPPPQDLVKNIYSNQRVYIDQN 338
PPP D ++ S V++ QN
Sbjct: 815 NNPPPTDYLETASSATSVWLSQN 837
>05_04_0268 -
19574540-19574582,19574664-19574755,19574843-19574920,
19575095-19575232,19575478-19575606,19575889-19576018,
19576171-19576348,19576715-19576853,19577031-19577120,
19577260-19577421,19577556-19577720,19577909-19578046,
19578657-19578836,19579129-19579257,19579442-19579677,
19579795-19579957,19580030-19580070,19580162-19580489,
19581416-19581553,19581670-19581873
Length = 966
Score = 27.9 bits (59), Expect = 4.4
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +3
Query: 198 RPQPSETHNVSPAPALQRLLTAS 266
RP+PS T + P PA+ RL+T++
Sbjct: 161 RPEPSTTSLLLPIPAMVRLITSA 183
>01_06_0959 -
33362810-33363125,33363309-33363475,33363583-33364410,
33364483-33364719,33365455-33365871,33365951-33366412,
33367197-33367382
Length = 870
Score = 27.9 bits (59), Expect = 4.4
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = -1
Query: 208 GWGRARLTLSGRAPHMTAGSNTGSSSLVGIKGEFPSSISLSD 83
G ++ TLSG M++G++T +SSL+ + +SI+ D
Sbjct: 14 GGAFSKRTLSGYMRIMSSGASTAASSLLSVGASLVNSIASHD 55
>01_06_0259 + 27955005-27955436,27955685-27955822
Length = 189
Score = 27.9 bits (59), Expect = 4.4
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -1
Query: 298 FTRSCGGGPVVDAVSRRCKAGAGDTLCVSEGWGRAR 191
F+R C PV+ R KA +G+ + G+ R R
Sbjct: 90 FSRPCRTQPVISYTQRTWKAASGEPMHAESGYWRPR 125
>09_06_0176 + 21351884-21352693,21352821-21352976,21353425-21353613,
21354741-21356354,21356446-21356553,21356649-21357509,
21357586-21357632,21358591-21358697,21359512-21359630,
21359706-21359915,21360412-21360693,21360820-21360952,
21361256-21361413,21362564-21362647,21362949-21363035
Length = 1654
Score = 27.5 bits (58), Expect = 5.8
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +3
Query: 6 PQENDSSCEQSSLLTELSLDAFDNTKSDNDIDDGNSPFIPTSD 134
P +DS + DA DN +DND N P P SD
Sbjct: 1018 PDASDSDAANIDEILPNVNDALDNNSADNDAICPNVPDAPDSD 1060
>08_01_0535 -
4638954-4639127,4639894-4639944,4640287-4640352,
4640492-4640557,4640701-4640892,4641282-4641780,
4642009-4642364
Length = 467
Score = 27.5 bits (58), Expect = 5.8
Identities = 18/55 (32%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Frame = -1
Query: 283 GGGPVVDAVSRRCKAGAGDTLCVSEGWGRARLTLSGRA-PHMTAGSNTGSSSLVG 122
GGG A C A A +T+ GW A + + G +A NT SS G
Sbjct: 21 GGGDWWSAAVSSCSAPAPETMQGFGGWSAAVVAVDGGGNTSRSAAGNTASSESPG 75
>05_06_0059 - 25264704-25266032
Length = 442
Score = 27.5 bits (58), Expect = 5.8
Identities = 26/84 (30%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
Frame = +3
Query: 6 PQENDSSCEQSSLLTELSLDAFDNTKSDNDIDDGNSPFIPTSDELPVLEPAVMWGALPDS 185
P+ SS SS E SL + D+D DDG S P + LP A P
Sbjct: 290 PEATKSSISPSS--DEPSLGNYSGDDDDDDGDDGESSKKPDTTCLPT--EAAATATTPLV 345
Query: 186 VSLARPQPSETHN-VSPAPALQRL 254
+ A P ++T ++ A QRL
Sbjct: 346 AAAASPPATQTSQLIAIAKEKQRL 369
>04_03_0747 -
19251617-19251781,19252377-19252502,19252606-19252716,
19252931-19253679,19254034-19254167,19254595-19254740,
19255166-19255336,19255977-19256828
Length = 817
Score = 27.5 bits (58), Expect = 5.8
Identities = 20/85 (23%), Positives = 33/85 (38%)
Frame = +3
Query: 30 EQSSLLTELSLDAFDNTKSDNDIDDGNSPFIPTSDELPVLEPAVMWGALPDSVSLARPQP 209
E+ ++ E + ++ + D DG+SPF+ + + P P + P P
Sbjct: 91 EEEVVVVEDEEEEYEEVEEIED-PDGDSPFVDAPEHISPPPPPPPPARTP--MPTPTPTP 147
Query: 210 SETHNVSPAPALQRLLTASTTGPPP 284
+ T P P L A T P P
Sbjct: 148 TPTPTRPPVPVWAAPLPARTPTPTP 172
>03_05_0730 +
27208293-27208813,27209052-27209173,27210429-27210477,
27210689-27210938,27211474-27211619,27211699-27211846,
27212544-27212612,27212641-27212784
Length = 482
Score = 27.5 bits (58), Expect = 5.8
Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
Frame = +3
Query: 174 LPDSVSLARPQPSETHNVSPAPALQR---LLTASTTGPPPQDLVKNIYSNQRVYIDQNAS 344
LP V+ P PS T ++PA A +R LL A+ + +Y QR Q +
Sbjct: 6 LPLPVTPPPPLPSPTLTLAPASAPRRRLVLLAAAAPHHHHHHRRRRVYRRQRAAPTQTRA 65
Query: 345 PRARSAVSKQ**SEE 389
PR + S EE
Sbjct: 66 PRRTLSASNAARGEE 80
>01_01_0595 - 4430738-4430785,4430904-4432679
Length = 607
Score = 27.5 bits (58), Expect = 5.8
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = +3
Query: 99 DDGNSPFIPTSDELPVLEPAVMWGALPDSVSLARPQPSETHNVSPAPA 242
D G SP +PT+ + L PA A S S+ P H P PA
Sbjct: 115 DSGASPSVPTTKRVDTLPPAAADKA-AISPSIPVPVRKRVHAPQPPPA 161
>12_02_0320 - 17504511-17505016,17505757-17506147
Length = 298
Score = 27.1 bits (57), Expect = 7.7
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +3
Query: 189 SLARPQPSETHNVSPAPALQRLLTASTTGPPPQ 287
S P P+ +PAPA + T + PPPQ
Sbjct: 6 STTTPAPAPAPAPAPAPAAEPQTTGNAPPPPPQ 38
>08_01_0297 + 2399731-2401176
Length = 481
Score = 27.1 bits (57), Expect = 7.7
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = +3
Query: 123 PTSDELPVLEPAVMWGALPDSVSLARPQPS---ETHNVSPAPALQRLLTASTTGPPPQ 287
P + PVL+ ++ LP ++ R + + E H VSP + LL A+ GP P+
Sbjct: 54 PAQQQQPVLKAPLL--RLPSFLARGRGEVAMKEEAHGVSPRRLERVLLPAAPDGPSPR 109
>07_01_0279 + 2055310-2055541,2055916-2056235,2056734-2057213
Length = 343
Score = 27.1 bits (57), Expect = 7.7
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +3
Query: 264 STTGPPPQDLVKNIYSNQRVYIDQ-NASPRARSAVSKQ 374
+T PPP V YSNQR + +Q N+S + V Q
Sbjct: 243 NTLQPPPASNVNGGYSNQRYFQEQWNSSSNDNTTVFHQ 280
>06_01_0855 + 6493239-6494420
Length = 393
Score = 27.1 bits (57), Expect = 7.7
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +3
Query: 192 LARPQ-PSETHNVSPAPALQRLLTASTTGPP 281
L RP P T +SP +L+RLL STT P
Sbjct: 13 LLRPAYPHPTAAISPLSSLRRLLLFSTTAAP 43
>05_07_0210 + 28427167-28427589
Length = 140
Score = 27.1 bits (57), Expect = 7.7
Identities = 14/48 (29%), Positives = 19/48 (39%)
Frame = -1
Query: 283 GGGPVVDAVSRRCKAGAGDTLCVSEGWGRARLTLSGRAPHMTAGSNTG 140
GG P + + R C A A + G + RAP TA + G
Sbjct: 20 GGAPHLQQLRRACVAAAAACAVLGTAGGPGEGAVMARAPEATAAAAAG 67
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,999,649
Number of Sequences: 37544
Number of extensions: 289865
Number of successful extensions: 1152
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1151
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 967140324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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